RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TCF15Q12870 199 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 ZC2HC1AQ96GY0 325 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 LEPROTO15243 131 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 INAFM2P0DMQ5 153 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 SYNJ2BPP57105 145 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 DIAPH2-AS1Q14236 149 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 LINC01545Q5VT33 79 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 FGF6P10767 208 aa13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 RNF166Q96A37 237 aaPredicted RBP13.13□□□□□ -0.31
SH3RF1-201ENST00000284637 IGLV3-1P01715 115 aa13.12□□□□□ -0.31
SH3RF1-201ENST00000284637 TRACP01848 142 aa13.12□□□□□ -0.31
SH3RF1-201ENST00000284637 WFDC2Q14508 124 aa13.12□□□□□ -0.31
SH3RF1-201ENST00000284637 NDUFS7O75251 213 aa13.12□□□□□ -0.31
SH3RF1-201ENST00000284637 FXYD5Q96DB9 178 aa13.12□□□□□ -0.31
SH3RF1-201ENST00000284637 DKK2Q9UBU2 259 aa13.12□□□□□ -0.31
SH3RF1-201ENST00000284637 B4DSR2 109 aa13.12□□□□□ -0.31
SH3RF1-201ENST00000284637 GTF3C1Q12789 2109 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 GATA4P43694 442 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 MSRB2Q9Y3D2 182 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 TRPT1Q86TN4 253 aaKnown RBP13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 F8VRH5 84 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 HLA-DMBP28068 263 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 LOXP28300 417 aaPredicted RBP13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 DEFB131AP59861 70 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 PRR20EP86478 221 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 PRR20CP86479 221 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 PRR20DP86480 221 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 PRR20BP86481 221 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 PRR20AP86496 221 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 RUSC1-AS1Q66K80 236 aa13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 NTN5Q8WTR8 489 aaPredicted RBP13.11□□□□□ -0.31
SH3RF1-201ENST00000284637 SPINK13Q1W4C9 94 aa13.1□□□□□ -0.31
SH3RF1-201ENST00000284637 OVOL2Q9BRP0 275 aa13.1□□□□□ -0.31
SH3RF1-201ENST00000284637 TSC2P49815 1807 aa13.1□□□□□ -0.31
SH3RF1-201ENST00000284637 FNDC1Q4ZHG4 1894 aaPredicted RBP13.1□□□□□ -0.31
SH3RF1-201ENST00000284637 FAM110DQ8TAY7 271 aaPredicted RBP13.1□□□□□ -0.31
SH3RF1-201ENST00000284637 KLK9Q9UKQ9 250 aa13.1□□□□□ -0.31
SH3RF1-201ENST00000284637 INSP01308 110 aa13.1□□□□□ -0.31
SH3RF1-201ENST00000284637 SDHAF1A6NFY7 115 aa13.09□□□□□ -0.31
SH3RF1-201ENST00000284637 PRSS29PA6NIE9 313 aa13.09□□□□□ -0.31
SH3RF1-201ENST00000284637 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
SH3RF1-201ENST00000284637 TRBV25-1A0A075B6N4 114 aa13.09□□□□□ -0.31
SH3RF1-201ENST00000284637 Q8TCH9 128 aa13.09□□□□□ -0.31
SH3RF1-201ENST00000284637 DYSFO75923 2080 aa13.09□□□□□ -0.31
SH3RF1-201ENST00000284637 H3BRN7 92 aa13.09□□□□□ -0.31
SH3RF1-201ENST00000284637 UTF1Q5T230 341 aa13.08□□□□□ -0.31
SH3RF1-201ENST00000284637 LY6G6EA0A0G2JKS1 128 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 MORN5Q5VZ52 161 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 TEX36Q5VZQ5 186 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 LINC00173Q6ZV60 143 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 U3KQA8 63 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 IGHV3-16A0A0C4DH30 117 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 KLHL30-AS1Q8NEE0 82 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 HLA-DRB4P13762 266 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 TMEM14CQ9P0S9 112 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 HLA-DRB4X5D2U9 266 aa13.08□□□□□ -0.32
SH3RF1-201ENST00000284637 IGLV3-9A0A075B6K5 115 aa13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 PRR30Q53SZ7 412 aaPredicted RBP13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 LYPD6Q86Y78 171 aa13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 TEN1Q86WV5 123 aa13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 TMEM126AQ9H061 195 aa13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 C17orf77Q96MU5 243 aa13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 YPEL4Q96NS1 127 aa13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 TCTEX1D4Q5JR98 221 aa13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 MED13Q9UHV7 2174 aa13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 PLXNA4Q9HCM2 1894 aa13.07□□□□□ -0.32
SH3RF1-201ENST00000284637 GNLYP22749 145 aa13.06□□□□□ -0.32
SH3RF1-201ENST00000284637 ANKRD29Q8N6D5 301 aa13.06□□□□□ -0.32
SH3RF1-201ENST00000284637 DEFB130BP0DP73 79 aa13.06□□□□□ -0.32
SH3RF1-201ENST00000284637 DEFB130AP0DP74 79 aa13.06□□□□□ -0.32
SH3RF1-201ENST00000284637 FOXI1Q12951 378 aa13.06□□□□□ -0.32
SH3RF1-201ENST00000284637 TMEM141Q96I45 108 aa13.06□□□□□ -0.32
SH3RF1-201ENST00000284637 XCL2Q9UBD3 114 aa13.05□□□□□ -0.32
SH3RF1-201ENST00000284637 WDR81Q562E7 1941 aa13.05□□□□□ -0.32
SH3RF1-201ENST00000284637 FAM120AOSQ5T036 256 aa13.05□□□□□ -0.32
SH3RF1-201ENST00000284637 SMIM2Q9BVW6 85 aa13.05□□□□□ -0.32
SH3RF1-201ENST00000284637 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
SH3RF1-201ENST00000284637 UBE2E1P51965 193 aa13.05□□□□□ -0.32
SH3RF1-201ENST00000284637 MGAMO43451 1857 aa13.05□□□□□ -0.32
SH3RF1-201ENST00000284637 INS-IGF2F8WCM5 200 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 THAP8Q8NA92 274 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 HIGD1BQ9P298 99 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 SHISA9B4DS77 424 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 FXYD2P54710 66 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 DSCR9P59020 149 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 POU2AF1Q16633 256 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 BDP1A6H8Y1 2624 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 LINC00311Q8N616 119 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 I3L3M4 83 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 VWC2LB2RUY7 222 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 DNAJC30Q96LL9 226 aa13.04□□□□□ -0.32
SH3RF1-201ENST00000284637 LTAP01374 205 aa13.03□□□□□ -0.32
SH3RF1-201ENST00000284637 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
SH3RF1-201ENST00000284637 THSD7BQ9C0I4 1608 aa13.03□□□□□ -0.32
SH3RF1-201ENST00000284637 IGHV3-38A0A0C4DH36 116 aa13.03□□□□□ -0.32
SH3RF1-201ENST00000284637 IGHG4P01861 327 aa13.03□□□□□ -0.32
SH3RF1-201ENST00000284637 K7EM74 188 aa13.02□□□□□ -0.32
SH3RF1-201ENST00000284637 IGLV1-44P01699 117 aa13.02□□□□□ -0.32
SH3RF1-201ENST00000284637 PFN2P35080 140 aa13.02□□□□□ -0.32
SH3RF1-201ENST00000284637 ZNF491Q8N8L2 437 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms