RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TWIST1Q15672 202 aa13.65□□□□□ -0.22
CAPN1-201ENST00000279247 TDRG1Q3Y452 100 aa13.65□□□□□ -0.22
CAPN1-201ENST00000279247 LOC102724200A0A096LPH7 203 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-201ENST00000279247 FABP5P3A8MUU1 101 aa13.65□□□□□ -0.22
CAPN1-201ENST00000279247 SPRY2O43597 315 aa13.65□□□□□ -0.22
CAPN1-201ENST00000279247 BMI1P35226 326 aa13.65□□□□□ -0.22
CAPN1-201ENST00000279247 FAM231BA6NCW3 169 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 HAX1O00165 279 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 HIST1H1AQ02539 215 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-201ENST00000279247 NIT1Q86X76 327 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 AMN1Q8IY45 258 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 M0R2Z0 102 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 SYNJ2BPP57105 145 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 FAM106AQ4KMX7 169 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 FER1L6-AS1Q8NA97 138 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 DUX3Q96PT4 197 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 IGHV7-4-1A0A0J9YVY3 117 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 C18orf65Q6ZTR6 163 aa13.64□□□□□ -0.23
CAPN1-201ENST00000279247 LOC389332A0A1B0GUA5 103 aa13.63□□□□□ -0.23
CAPN1-201ENST00000279247 TSTD3H0UI37 97 aa13.63□□□□□ -0.23
CAPN1-201ENST00000279247 LRRC75A-AS1Q8N1F1 130 aa13.63□□□□□ -0.23
CAPN1-201ENST00000279247 C11orf44Q8N8P7 122 aa13.63□□□□□ -0.23
CAPN1-201ENST00000279247 SMR3AQ99954 134 aa13.63□□□□□ -0.23
CAPN1-201ENST00000279247 ZNF702PQ9H963 129 aa13.63□□□□□ -0.23
CAPN1-201ENST00000279247 C11orf21Q9P2W6 132 aa13.63□□□□□ -0.23
CAPN1-201ENST00000279247 ESDP10768 282 aa13.62□□□□□ -0.23
CAPN1-201ENST00000279247 KIR3DS1Q14943 382 aa13.62□□□□□ -0.23
CAPN1-201ENST00000279247 ATOH7Q8N100 152 aa13.62□□□□□ -0.23
CAPN1-201ENST00000279247 SMKR1H3BMG3 65 aa13.62□□□□□ -0.23
CAPN1-201ENST00000279247 FSHBP01225 129 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 FAM209BQ5JX69 171 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 PRR9Q5T870 116 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 C9orf139Q6ZV77 190 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 PAM16Q9Y3D7 125 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 H0Y8G0 127 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 IGKV3-20P01619 116 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 URB1-AS1Q96HZ7 61 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 NCR2O95944 276 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 ATP6V0BQ99437 205 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 SMPXQ9UHP9 88 aa13.61□□□□□ -0.23
CAPN1-201ENST00000279247 IGHV4OR15-8A0A075B7B6 117 aa13.6□□□□□ -0.23
CAPN1-201ENST00000279247 A0A087WW49 117 aa13.6□□□□□ -0.23
CAPN1-201ENST00000279247 PKIAP61925 76 aa13.6□□□□□ -0.23
CAPN1-201ENST00000279247 OR10J6PQ8NGY7 276 aa13.6□□□□□ -0.23
CAPN1-201ENST00000279247 SETXQ7Z333 2677 aaKnown RBP13.6□□□□□ -0.23
CAPN1-201ENST00000279247 IGKV3D-20A0A0C4DH25 116 aa13.6□□□□□ -0.23
CAPN1-201ENST00000279247 D6R8Y8 96 aa13.6□□□□□ -0.23
CAPN1-201ENST00000279247 C3orf79P0CE67 100 aa13.59□□□□□ -0.23
CAPN1-201ENST00000279247 ZNF688P0C7X2 276 aa13.59□□□□□ -0.23
CAPN1-201ENST00000279247 FXYD7P58549 80 aa13.59□□□□□ -0.23
CAPN1-201ENST00000279247 ZNF575Q86XF7 245 aa13.58□□□□□ -0.23
CAPN1-201ENST00000279247 ANK3Q12955 4377 aaKnown RBP13.58□□□□□ -0.24
CAPN1-201ENST00000279247 RBAKDNA6NC62 111 aa13.58□□□□□ -0.24
CAPN1-201ENST00000279247 DDTP30046 118 aa13.58□□□□□ -0.24
CAPN1-201ENST00000279247 Q6AWC8 147 aa13.58□□□□□ -0.24
CAPN1-201ENST00000279247 FBLL1A6NHQ2 334 aaKnown RBP13.58□□□□□ -0.24
CAPN1-201ENST00000279247 KLF5Q13887 457 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-201ENST00000279247 LINC00173Q6ZV60 143 aa13.58□□□□□ -0.24
CAPN1-201ENST00000279247 ARL6IP6Q8N6S5 226 aa13.58□□□□□ -0.24
CAPN1-201ENST00000279247 MCRIP2Q9BUT9 160 aaKnown RBP13.58□□□□□ -0.24
CAPN1-201ENST00000279247 HIVEP2P31629 2446 aa13.57□□□□□ -0.24
CAPN1-201ENST00000279247 RNASE4P34096 147 aaKnown RBP13.57□□□□□ -0.24
CAPN1-201ENST00000279247 DEFA6Q01524 100 aa13.57□□□□□ -0.24
CAPN1-201ENST00000279247 C9orf47Q6ZRZ4 202 aa13.57□□□□□ -0.24
CAPN1-201ENST00000279247 SOCS3O14543 225 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 LINC00614P0C842 121 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 HOXD3P31249 432 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-201ENST00000279247 KLHDC1Q8N7A1 406 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 OR10AG1Q8NH19 301 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 H3BVH4 76 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 BRI3O95415 125 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 SLURP1P55000 103 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 PRSS3P2Q8NHM4 247 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 YAE1D1Q9NRH1 226 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 UFC1Q9Y3C8 167 aa13.56□□□□□ -0.24
CAPN1-201ENST00000279247 GAS8-AS1O95177 125 aa13.55□□□□□ -0.24
CAPN1-201ENST00000279247 RPS20P60866 119 aaKnown RBP13.55□□□□□ -0.24
CAPN1-201ENST00000279247 PSMG4Q5JS54 123 aa13.55□□□□□ -0.24
CAPN1-201ENST00000279247 EBLN2Q6P2I7 272 aa13.55□□□□□ -0.24
CAPN1-201ENST00000279247 PRSS57Q6UWY2 283 aa13.55□□□□□ -0.24
CAPN1-201ENST00000279247 IGLC6P0CF74 106 aa13.55□□□□□ -0.24
CAPN1-201ENST00000279247 COX8CQ7Z4L0 72 aa13.55□□□□□ -0.24
CAPN1-201ENST00000279247 OR8A1Q8NGG7 326 aa13.55□□□□□ -0.24
CAPN1-201ENST00000279247 HIVEP1P15822 2718 aa13.55□□□□□ -0.24
CAPN1-201ENST00000279247 IGHV1-24A0A0C4DH33 117 aa13.54□□□□□ -0.24
CAPN1-201ENST00000279247 CKS2P33552 79 aa13.54□□□□□ -0.24
CAPN1-201ENST00000279247 IFI27P40305 119 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-201ENST00000279247 MRPL51Q4U2R6 128 aaKnown RBP13.54□□□□□ -0.24
CAPN1-201ENST00000279247 MRPL53Q96EL3 112 aaKnown RBP13.54□□□□□ -0.24
CAPN1-201ENST00000279247 A0A1W2PRX2 142 aa13.54□□□□□ -0.24
CAPN1-201ENST00000279247 LGALS1P09382 135 aaKnown RBP13.54□□□□□ -0.24
CAPN1-201ENST00000279247 FAM104BQ5XKR9 115 aa13.54□□□□□ -0.24
CAPN1-201ENST00000279247 PRELID3AQ96N28 172 aa13.54□□□□□ -0.24
CAPN1-201ENST00000279247 LINC01559Q495D7 138 aa13.53□□□□□ -0.24
CAPN1-201ENST00000279247 VAMP8Q9BV40 100 aa13.53□□□□□ -0.24
CAPN1-201ENST00000279247 EVI2AP22794 236 aa13.53□□□□□ -0.24
CAPN1-201ENST00000279247 MAJINQ3KP22 176 aa13.53□□□□□ -0.24
CAPN1-201ENST00000279247 MS4A6AQ9H2W1 248 aa13.53□□□□□ -0.24
CAPN1-201ENST00000279247 GATA1P15976 413 aaPredicted RBP13.53□□□□□ -0.24
CAPN1-201ENST00000279247 CTRLP40313 264 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms