RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 H3BUA1 57 aa19.23■□□□□ 0.67
ROM1-201ENST00000278833 NPYP01303 97 aa19.23■□□□□ 0.67
ROM1-201ENST00000278833 ORM1P02763 201 aa19.23■□□□□ 0.67
ROM1-201ENST00000278833 COX8AP10176 69 aa19.23■□□□□ 0.67
ROM1-201ENST00000278833 KRTAP10-9P60411 292 aa19.23■□□□□ 0.67
ROM1-201ENST00000278833 LOXL1Q08397 574 aaPredicted RBP19.23■□□□□ 0.67
ROM1-201ENST00000278833 FAM106AQ4KMX7 169 aa19.23■□□□□ 0.67
ROM1-201ENST00000278833 PIFOQ8TCI5 191 aa19.23■□□□□ 0.67
ROM1-201ENST00000278833 LENEPQ9Y5L5 61 aa19.23■□□□□ 0.67
ROM1-201ENST00000278833 C8orf86Q6ZUL3 223 aa19.22■□□□□ 0.67
ROM1-201ENST00000278833 OR1N2Q8NGR9 330 aa19.22■□□□□ 0.67
ROM1-201ENST00000278833 AGPAT4-IT1Q9H0P7 198 aa19.22■□□□□ 0.67
ROM1-201ENST00000278833 NOTCH2Q04721 2471 aa19.22■□□□□ 0.67
ROM1-201ENST00000278833 TCF21O43680 179 aa19.22■□□□□ 0.67
ROM1-201ENST00000278833 C12orf54Q6X4T0 127 aa19.22■□□□□ 0.67
ROM1-201ENST00000278833 IL17RELQ6ZVW7 336 aa19.22■□□□□ 0.67
ROM1-201ENST00000278833 IGF1P05019 195 aa19.21■□□□□ 0.67
ROM1-201ENST00000278833 C9orf139Q6ZV77 190 aa19.21■□□□□ 0.67
ROM1-201ENST00000278833 RNF182Q8N6D2 247 aa19.21■□□□□ 0.67
ROM1-201ENST00000278833 GLMPQ8WWB7 406 aa19.21■□□□□ 0.67
ROM1-201ENST00000278833 MAP1LC3AQ9H492 121 aa19.21■□□□□ 0.67
ROM1-201ENST00000278833 NDUFS8O00217 210 aa19.2■□□□□ 0.66
ROM1-201ENST00000278833 NCR2O95944 276 aa19.2■□□□□ 0.66
ROM1-201ENST00000278833 FOSL1P15407 271 aa19.2■□□□□ 0.66
ROM1-201ENST00000278833 TMEM78Q5T7P6 136 aa19.2■□□□□ 0.66
ROM1-201ENST00000278833 ZNF738Q8NE65 137 aa19.2■□□□□ 0.66
ROM1-201ENST00000278833 PIMREGQ9BSJ6 248 aa19.2■□□□□ 0.66
ROM1-201ENST00000278833 DEFB125Q8N687 156 aa19.2■□□□□ 0.66
ROM1-201ENST00000278833 IGKV3D-20A0A0C4DH25 116 aa19.19■□□□□ 0.66
ROM1-201ENST00000278833 LOC389332A0A1B0GUA5 103 aa19.19■□□□□ 0.66
ROM1-201ENST00000278833 IGHV4-4A0A075B6R2 117 aa19.18■□□□□ 0.66
ROM1-201ENST00000278833 BVES-AS1Q5T3Y7 98 aa19.18■□□□□ 0.66
ROM1-201ENST00000278833 NXT2Q9NPJ8 142 aaKnown RBP19.18■□□□□ 0.66
ROM1-201ENST00000278833 WNK2Q9Y3S1 2297 aa19.18■□□□□ 0.66
ROM1-201ENST00000278833 NRGNQ92686 78 aa19.18■□□□□ 0.66
ROM1-201ENST00000278833 PRSS47A8MTI9 375 aa19.17■□□□□ 0.66
ROM1-201ENST00000278833 PSMG4Q5JS54 123 aa19.17■□□□□ 0.66
ROM1-201ENST00000278833 NDUFA4O00483 81 aa19.16■□□□□ 0.66
ROM1-201ENST00000278833 SNAI2O43623 268 aa19.16■□□□□ 0.66
ROM1-201ENST00000278833 MPV17L2Q567V2 206 aa19.16■□□□□ 0.66
ROM1-201ENST00000278833 C10orf105Q8TEF2 133 aa19.16■□□□□ 0.66
ROM1-201ENST00000278833 IFI27L1Q96BM0 104 aa19.16■□□□□ 0.66
ROM1-201ENST00000278833 OR8A1Q8NGG7 326 aa19.16■□□□□ 0.66
ROM1-201ENST00000278833 MCRIP2Q9BUT9 160 aaKnown RBP19.16■□□□□ 0.66
ROM1-201ENST00000278833 MSRB1Q9NZV6 116 aa19.16■□□□□ 0.66
ROM1-201ENST00000278833 MUC21A0A0G2JKD1 596 aa19.15■□□□□ 0.66
ROM1-201ENST00000278833 MUC21A0A140T8X8 626 aa19.15■□□□□ 0.66
ROM1-201ENST00000278833 SMKR1H3BMG3 65 aa19.15■□□□□ 0.66
ROM1-201ENST00000278833 MUC21Q5SSG8 566 aa19.15■□□□□ 0.66
ROM1-201ENST00000278833 PRSS57Q6UWY2 283 aa19.15■□□□□ 0.66
ROM1-201ENST00000278833 TMEM219Q86XT9 240 aa19.15■□□□□ 0.66
ROM1-201ENST00000278833 USMG5Q96IX5 58 aa19.15■□□□□ 0.66
ROM1-201ENST00000278833 C11orf21Q9P2W6 132 aa19.15■□□□□ 0.66
ROM1-201ENST00000278833 IGHV3-66A0A0C4DH42 116 aa19.14■□□□□ 0.65
ROM1-201ENST00000278833 IGHV7-4-1A0A0J9YVY3 117 aa19.14■□□□□ 0.65
ROM1-201ENST00000278833 H0Y8G0 127 aa19.14■□□□□ 0.65
ROM1-201ENST00000278833 TRGV3P03979 118 aa19.14■□□□□ 0.65
ROM1-201ENST00000278833 FGF6P10767 208 aa19.14■□□□□ 0.65
ROM1-201ENST00000278833 CACNG7P62955 275 aa19.14■□□□□ 0.65
ROM1-201ENST00000278833 IGHG2P01859 326 aa19.14■□□□□ 0.65
ROM1-201ENST00000278833 ARL3P36405 182 aa19.14■□□□□ 0.65
ROM1-201ENST00000278833 C2orf91Q6ZV80 131 aa19.14■□□□□ 0.65
ROM1-201ENST00000278833 TIMM8BQ9Y5J9 83 aaPredicted RBP19.14■□□□□ 0.65
ROM1-201ENST00000278833 IGHV4-61A0A0C4DH41 118 aa19.13■□□□□ 0.65
ROM1-201ENST00000278833 TNFRSF6BO95407 300 aa19.13■□□□□ 0.65
ROM1-201ENST00000278833 PPIFP30405 207 aaKnown RBP19.13■□□□□ 0.65
ROM1-201ENST00000278833 TP73-AS1Q9UF72 201 aa19.13■□□□□ 0.65
ROM1-201ENST00000278833 NAV2Q8IVL1 2488 aa19.13■□□□□ 0.65
ROM1-201ENST00000278833 TRAV40A0A0B4J280 105 aa19.12■□□□□ 0.65
ROM1-201ENST00000278833 A6NDX4 124 aa19.12■□□□□ 0.65
ROM1-201ENST00000278833 NUDT3O95989 172 aa19.12■□□□□ 0.65
ROM1-201ENST00000278833 FCER1GP30273 86 aa19.12■□□□□ 0.65
ROM1-201ENST00000278833 ANKRD17O75179 2603 aaKnown RBP19.12■□□□□ 0.65
ROM1-201ENST00000278833 UBE2V1Q13404 147 aa19.11■□□□□ 0.65
ROM1-201ENST00000278833 ZNF580Q9UK33 172 aa19.11■□□□□ 0.65
ROM1-201ENST00000278833 SOCS3O14543 225 aa19.11■□□□□ 0.65
ROM1-201ENST00000278833 PDZD2O15018 2839 aa19.11■□□□□ 0.65
ROM1-201ENST00000278833 Q8N8P6 123 aa19.1■□□□□ 0.65
ROM1-201ENST00000278833 C16orf92Q96LL3 132 aa19.1■□□□□ 0.65
ROM1-201ENST00000278833 LINC00477Q96M19 166 aa19.1■□□□□ 0.65
ROM1-201ENST00000278833 IGLV2-18A0A075B6J9 118 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 OVOL1O14753 267 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 ZNF207O43670 478 aaKnown RBP19.09■□□□□ 0.65
ROM1-201ENST00000278833 ANKRD39Q53RE8 183 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 BOD1L2Q8IYS8 172 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 CCL19Q99731 98 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 ABCA2Q9BZC7 2435 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 IGHV3OR16-13A0A075B7E8 117 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 IGHV3-74A0A0B4J1X5 117 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 TRBV7-9A0A0J9YWB2 115 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 TAX1BP3O14907 124 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 SIVA1O15304 175 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 SMIM15Q7Z3B0 74 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 GPHB5Q86YW7 130 aa19.09■□□□□ 0.65
ROM1-201ENST00000278833 CD5LO43866 347 aa19.08■□□□□ 0.65
ROM1-201ENST00000278833 OR9G4Q8NGQ1 327 aa19.07■□□□□ 0.64
ROM1-201ENST00000278833 ZMAT4Q9H898 229 aa19.07■□□□□ 0.64
ROM1-201ENST00000278833 IGHV3-49A0A0A0MS15 119 aa19.07■□□□□ 0.64
ROM1-201ENST00000278833 CYSRT1A8MQ03 144 aa19.06■□□□□ 0.64
ROM1-201ENST00000278833 CCL25O15444 150 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms