RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 IGKV1-12A0A0C4DH73 117 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 IRGMA1A4Y4 181 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 MEIS3P1A6NDR6 274 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 C9JCJ5 164 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 INS-IGF2F8WCM5 200 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 SOCS1O15524 211 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 SCO1O75880 301 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 LY6HO94772 140 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 IGKV1-5P01602 117 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 IGKV1D-12P01611 117 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 IGHV3-13P01766 116 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 MAS1P04201 325 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 CD14P08571 375 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 CFC1BP0CG36 223 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 CFC1P0CG37 223 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 HIST1H1BP16401 226 aaKnown RBP3.19□□□□□ -1.9
CD44-202ENST00000278385 CXCL5P42830 114 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 NUDT2P50583 147 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 RAB5CP51148 216 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 ZNF80P51504 273 aaPredicted RBP3.19□□□□□ -1.9
CD44-202ENST00000278385 TMBIM6P55061 237 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 RBM11P57052 281 aaKnown RBP3.19□□□□□ -1.9
CD44-202ENST00000278385 SMIM11AP58511 58 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 MSMO1Q15800 293 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 SP6Q3SY56 376 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 BCL2L15Q5TBC7 163 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 Q8N7P7 452 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 OR2T10Q8NGZ9 312 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 OR4A5Q8NH83 315 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 DCANP1Q8TF63 244 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 GTSF1Q8WW33 167 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 PP6455Q8WZ26 134 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 PYGO2Q9BRQ0 406 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 BPESC1Q9GZL8 116 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 ZNF286AQ9HBT8 521 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 C8orf17Q9NRJ1 99 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 ZNF581Q9P0T4 197 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 CCDC168Q8NDH2 2452 aa3.19□□□□□ -1.9
CD44-202ENST00000278385 OTOGQ6ZRI0 2925 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 MED13LQ71F56 2210 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 IGLV3-9A0A075B6K5 115 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 TRAV27A0A087WT01 109 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 IGHV3-66A0A0C4DH42 116 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 SRRM5B3KS81 715 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 B4DSR2 109 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 ZNF670-ZNF695F2Z2N8 137 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 H0YJW9 148 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 M0R378 163 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 NDUFB2O95178 105 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 ZNF32P17041 273 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 HIST1H2BOP23527 126 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 COL8A2P25067 703 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 HIST1H2BBP33778 126 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 SDC2P34741 201 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 NMUP48645 174 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 NDUFA6P56556 154 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 HIST1H2BDP58876 126 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 HIST1H2BCP62807 126 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 CCL20P78556 96 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 HIST2H2BEQ16778 126 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 PABPC1L2AQ5JQF8 200 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.18□□□□□ -1.9
CD44-202ENST00000278385 CRYBG3Q68DQ2 2970 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 TEX29Q8N6K0 151 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 OR5C1Q8NGR4 320 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 OR5H6Q8NGV6 325 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 TMEM158Q8WZ71 300 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 HIST1H2BHQ93079 126 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 POP5Q969H6 163 aaKnown RBP3.18□□□□□ -1.9
CD44-202ENST00000278385 ZC2HC1AQ96GY0 325 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 HIST1H2BNQ99877 126 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 HIST1H2BMQ99879 126 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 SNHG12Q9BXW3 62 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 TMEM133Q9H2Q1 129 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 SOX21Q9Y651 276 aaPredicted RBP3.18□□□□□ -1.9
CD44-202ENST00000278385 HEATR5AQ86XA9 2040 aa3.18□□□□□ -1.9
CD44-202ENST00000278385 POLQO75417 2590 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 IGHV7-4-1A0A0J9YVY3 117 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 A0A1B0GW54 56 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 LYNX1G3V0Z9 82 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 CDC42EP2O14613 210 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 HSPB1P04792 205 aaKnown RBP3.17□□□□□ -1.9
CD44-202ENST00000278385 AKAIN1P0CW23 69 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 LYNX1P0DP58 116 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 ATP6V0CP27449 155 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 PSMB8P28062 276 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 GNGT1P63211 74 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 RPL22L1Q6P5R6 122 aaKnown RBP3.17□□□□□ -1.9
CD44-202ENST00000278385 SLC25A42Q86VD7 318 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 LINC00471Q8N535 108 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 C3orf22Q8N5N4 141 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 FER1L6-AS1Q8NA97 138 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 C20orf203Q8NBC4 194 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 OR4K13Q8NH42 304 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 KLF14Q8TD94 323 aaPredicted RBP3.17□□□□□ -1.9
CD44-202ENST00000278385 RMI2Q96E14 147 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 ZNF414Q96IQ9 312 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 Q96M85 177 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 OR4C12Q96R67 309 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 B9D2Q9BPU9 175 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms