RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 DTX1Q86Y01 620 aa13.4□□□□□ -0.26
TSPAN3-201ENST00000267970 ANGP03950 147 aaKnown RBP13.4□□□□□ -0.26
TSPAN3-201ENST00000267970 DOCK8Q8NF50 2099 aa13.4□□□□□ -0.27
TSPAN3-201ENST00000267970 K7EN84 100 aa13.39□□□□□ -0.27
TSPAN3-201ENST00000267970 PCP2Q8IVA1 136 aa13.39□□□□□ -0.27
TSPAN3-201ENST00000267970 TMEM14BQ9NUH8 114 aa13.39□□□□□ -0.27
TSPAN3-201ENST00000267970 SMIM27A0A1W2PRY6 76 aa13.39□□□□□ -0.27
TSPAN3-201ENST00000267970 NDUFA4L2Q9NRX3 87 aa13.39□□□□□ -0.27
TSPAN3-201ENST00000267970 IGHV1OR15-1A0A075B7D0 117 aa13.38□□□□□ -0.27
TSPAN3-201ENST00000267970 FHL1Q13642 323 aa13.38□□□□□ -0.27
TSPAN3-201ENST00000267970 LINC01356Q8N9X3 169 aa13.38□□□□□ -0.27
TSPAN3-201ENST00000267970 NDUFS7O75251 213 aa13.38□□□□□ -0.27
TSPAN3-201ENST00000267970 TMEM141Q96I45 108 aa13.38□□□□□ -0.27
TSPAN3-201ENST00000267970 TMEM243Q9BU79 118 aa13.38□□□□□ -0.27
TSPAN3-201ENST00000267970 LINC01619G3V211 115 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 LHBP01229 141 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 FOXE3Q13461 319 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 ZNF524Q96C55 264 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 C17orf58Q2M2W7 97 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 KMT2EQ8IZD2 1858 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 C12orf74Q32Q52 190 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 Q9HAA7 133 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 PRR25Q96S07 402 aa13.37□□□□□ -0.27
TSPAN3-201ENST00000267970 ZNF134P52741 427 aa13.36□□□□□ -0.27
TSPAN3-201ENST00000267970 Q96MF0 132 aa13.36□□□□□ -0.27
TSPAN3-201ENST00000267970 CHKB-CPT1BH3BT56 60 aa13.36□□□□□ -0.27
TSPAN3-201ENST00000267970 RNF5Q99942 180 aa13.36□□□□□ -0.27
TSPAN3-201ENST00000267970 Q6ZR03 302 aa13.36□□□□□ -0.27
TSPAN3-201ENST00000267970 GREB1LQ9C091 1923 aaPredicted RBP13.36□□□□□ -0.27
TSPAN3-201ENST00000267970 IGKV1OR2-108A0A075B7D4 117 aa13.36□□□□□ -0.27
TSPAN3-201ENST00000267970 IGHG2P01859 326 aa13.36□□□□□ -0.27
TSPAN3-201ENST00000267970 RNF166Q96A37 237 aaPredicted RBP13.36□□□□□ -0.27
TSPAN3-201ENST00000267970 BAALC-AS2P0C853 105 aa13.35□□□□□ -0.27
TSPAN3-201ENST00000267970 WT1-ASQ06250 92 aa13.35□□□□□ -0.27
TSPAN3-201ENST00000267970 UNQ6494/PRO21346Q6UXR6 183 aa13.35□□□□□ -0.27
TSPAN3-201ENST00000267970 ZNF492Q9P255 531 aa13.35□□□□□ -0.27
TSPAN3-201ENST00000267970 DEFB136Q30KP8 78 aa13.35□□□□□ -0.27
TSPAN3-201ENST00000267970 CFHR4Q92496 578 aa13.35□□□□□ -0.27
TSPAN3-201ENST00000267970 ESM1Q9NQ30 184 aa13.35□□□□□ -0.27
TSPAN3-201ENST00000267970 TRIOBPQ9H2D6 2365 aa13.34□□□□□ -0.27
TSPAN3-201ENST00000267970 J3QQQ9 107 aa13.34□□□□□ -0.27
TSPAN3-201ENST00000267970 NOP10Q9NPE3 64 aaKnown RBP13.34□□□□□ -0.27
TSPAN3-201ENST00000267970 CMC4P56277 68 aaPredicted RBP13.34□□□□□ -0.27
TSPAN3-201ENST00000267970 LINC00173Q6ZV60 143 aa13.34□□□□□ -0.27
TSPAN3-201ENST00000267970 BRK1Q8WUW1 75 aa13.34□□□□□ -0.27
TSPAN3-201ENST00000267970 TRPM7Q96QT4 1865 aa13.34□□□□□ -0.27
TSPAN3-201ENST00000267970 IGLV10-54A0A075B6I4 117 aa13.33□□□□□ -0.28
TSPAN3-201ENST00000267970 DAND5Q8N907 189 aa13.33□□□□□ -0.28
TSPAN3-201ENST00000267970 C14orf132Q9NPU4 83 aa13.33□□□□□ -0.28
TSPAN3-201ENST00000267970 COL6A6A6NMZ7 2263 aa13.33□□□□□ -0.28
TSPAN3-201ENST00000267970 HEATR5AQ86XA9 2040 aa13.33□□□□□ -0.28
TSPAN3-201ENST00000267970 DSCR9P59020 149 aa13.33□□□□□ -0.28
TSPAN3-201ENST00000267970 SIPA1L1O43166 1804 aa13.33□□□□□ -0.28
TSPAN3-201ENST00000267970 SMIM2Q9BVW6 85 aa13.33□□□□□ -0.28
TSPAN3-201ENST00000267970 ADAMTS7Q9UKP4 1686 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 PDE6HQ13956 83 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 MSMBP08118 114 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 CDKN1BP46527 198 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 H3BRN7 92 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 TEX48A0A1B0GUV7 120 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 FXYD5Q96DB9 178 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 OOSP1A8MZH6 123 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 TDRG1Q3Y452 100 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 C5orf38Q86SI9 138 aa13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 RPL39LQ96EH5 51 aaKnown RBP13.32□□□□□ -0.28
TSPAN3-201ENST00000267970 THSD7AQ9UPZ6 1657 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 SP5Q6BEB4 398 aaPredicted RBP13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 APRG1Q8IVJ8 170 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 DYNAPQ8N1N2 210 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 IGKV2D-24A0A075B6R9 120 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 RHODO00212 210 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 LGALS9BQ3B8N2 356 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 LGALS9CQ6DKI2 356 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 ZNF833PQ6ZTB9 187 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 CT83Q5H943 113 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 ZNF407Q9C0G0 2248 aa13.31□□□□□ -0.28
TSPAN3-201ENST00000267970 SPTBN2O15020 2390 aa13.3□□□□□ -0.28
TSPAN3-201ENST00000267970 A0A1B0GX51 115 aa13.3□□□□□ -0.28
TSPAN3-201ENST00000267970 GVINP1Q7Z2Y8 2422 aa13.3□□□□□ -0.28
TSPAN3-201ENST00000267970 IGHV2-5P01817 119 aa13.3□□□□□ -0.28
TSPAN3-201ENST00000267970 RPL18AQ02543 176 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-201ENST00000267970 Q9H8V8 135 aa13.3□□□□□ -0.28
TSPAN3-201ENST00000267970 HELZP42694 1942 aaKnown RBP13.3□□□□□ -0.28
TSPAN3-201ENST00000267970 IGHV1-69DA0A0B4J2H0 117 aa13.3□□□□□ -0.28
TSPAN3-201ENST00000267970 IGHV1-69P01742 117 aa13.3□□□□□ -0.28
TSPAN3-201ENST00000267970 NUPR1O60356 82 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 FAM236AA0A1B0GUQ0 79 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 FAM236BA0A1B0GV22 79 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 VOPP1Q96AW1 172 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 BRWD3Q6RI45 1802 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 F8VRH5 84 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 NCOR1P1Q9H4R4 102 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 SPANXA1Q9NS26 97 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 NACAE9PAV3 2078 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 UBE2E1P51965 193 aa13.29□□□□□ -0.28
TSPAN3-201ENST00000267970 ROS1P08922 2347 aa13.28□□□□□ -0.28
TSPAN3-201ENST00000267970 CSRP1P21291 193 aaKnown RBP13.28□□□□□ -0.28
TSPAN3-201ENST00000267970 SPTSSBQ8NFR3 76 aa13.28□□□□□ -0.28
TSPAN3-201ENST00000267970 TTTY13Q9BZ97 58 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms