RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 PRSS46E5RG02 174 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 F8W1H4 67 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 G3V318 75 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 IGHV3-30P01768 117 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 IGHV3-33P01772 117 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 IGHV3-30-3P0DP02 117 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 IGHV3-30-5P0DP03 117 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 BVES-AS1Q5T3Y7 98 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 ZSWIM8A7E2V4 1837 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 A0A1B0GUS0 222 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 F8W735 103 aaPredicted RBP9.14□□□□□ -0.95
PTPN4-201ENST00000263708 BAALC-AS2P0C853 105 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 CAMK2N2Q96S95 79 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 IGHV1-69DA0A0B4J2H0 117 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 IGKV1D-12P01611 117 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 IGHV1-69P01742 117 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 CCL18P55774 89 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 SPANXDQ9BXN6 97 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 C9orf118A6NHY6 69 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 MLANAQ16655 118 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 ZNRD1Q9P1U0 126 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 MUC4Q99102 2169 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 IGLL5B9A064 214 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 H0YIZ8 118 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
PTPN4-201ENST00000263708 CR1LQ2VPA4 569 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 LY6G6FQ5SQ64 297 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 CASC2Q6XLA1 102 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 SRSF8Q9BRL6 282 aaKnown RBP9.13□□□□□ -0.95
PTPN4-201ENST00000263708 TRBV24-1A0A075B6N3 115 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 TEX22C9J3V5 150 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 WNK1Q9H4A3 2382 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 MRPL36Q9P0J6 103 aaKnown RBP9.13□□□□□ -0.95
PTPN4-201ENST00000263708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.13□□□□□ -0.95
PTPN4-201ENST00000263708 IGHV4OR15-8A0A075B7B6 117 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 A0A087WW49 117 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 IGKV2-29A2NJV5 120 aaPredicted RBP9.13□□□□□ -0.95
PTPN4-201ENST00000263708 MRPL51Q4U2R6 128 aaKnown RBP9.13□□□□□ -0.95
PTPN4-201ENST00000263708 IGKV1-27A0A075B6S5 117 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 GGNQ86UU5 652 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 RHOHQ15669 191 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 FANCD2OSQ96PS1 177 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 VWA8A3KMH1 1905 aa9.13□□□□□ -0.95
PTPN4-201ENST00000263708 WDR90Q96KV7 1748 aa9.12□□□□□ -0.95
PTPN4-201ENST00000263708 IGFBPL1Q8WX77 278 aa9.12□□□□□ -0.95
PTPN4-201ENST00000263708 TRAV4A0A0B4J268 109 aa9.12□□□□□ -0.95
PTPN4-201ENST00000263708 LINC00114Q6XXX2 140 aa9.12□□□□□ -0.95
PTPN4-201ENST00000263708 IGKV1-12A0A0C4DH73 117 aa9.12□□□□□ -0.95
PTPN4-201ENST00000263708 HLA-DMBP28068 263 aa9.12□□□□□ -0.95
PTPN4-201ENST00000263708 E7EQL1 145 aa9.12□□□□□ -0.95
PTPN4-201ENST00000263708 NDUFB8O95169 186 aa9.11□□□□□ -0.95
PTPN4-201ENST00000263708 IGKV1D-17A0A075B6S4 117 aa9.11□□□□□ -0.95
PTPN4-201ENST00000263708 OBSL1O75147 1896 aa9.11□□□□□ -0.95
PTPN4-201ENST00000263708 SLC25A29Q8N8R3 303 aa9.11□□□□□ -0.95
PTPN4-201ENST00000263708 C2orf16Q68DN1 1984 aa9.11□□□□□ -0.95
PTPN4-201ENST00000263708 C5orf24Q7Z6I8 188 aa9.11□□□□□ -0.95
PTPN4-201ENST00000263708 ETV2O00321 342 aaPredicted RBP9.11□□□□□ -0.95
PTPN4-201ENST00000263708 TM2D2Q9BX73 214 aa9.11□□□□□ -0.95
PTPN4-201ENST00000263708 Q9H8V8 135 aa9.11□□□□□ -0.95
PTPN4-201ENST00000263708 LY96Q9Y6Y9 160 aa9.11□□□□□ -0.95
PTPN4-201ENST00000263708 LRCOL1A6NCL2 159 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 H3BMG7 143 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 NCR3O14931 201 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 NREPQ16612 68 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 SIPA1L1O43166 1804 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 TRAV1-1A0A0B4J248 108 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 J3QQQ9 107 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 NTN3O00634 580 aaPredicted RBP9.1□□□□□ -0.95
PTPN4-201ENST00000263708 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 CD59P13987 128 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 BTCP35070 178 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 C5orf38Q86SI9 138 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 KIAA1549Q9HCM3 1950 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 LMO1P25800 156 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 MRPL53Q96EL3 112 aaKnown RBP9.1□□□□□ -0.95
PTPN4-201ENST00000263708 ICOSQ9Y6W8 199 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 IGHV2-70DA0A0C4DH43 119 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 C15orf62A8K5M9 175 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 GYPEP15421 78 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 FOXE3Q13461 319 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 WIPF2Q8TF74 440 aaPredicted RBP9.1□□□□□ -0.95
PTPN4-201ENST00000263708 U3KQE9 123 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 ETDBQ3ZM63 59 aa9.1□□□□□ -0.95
PTPN4-201ENST00000263708 NMSQ5H8A3 153 aa9.09□□□□□ -0.95
PTPN4-201ENST00000263708 CCL24O00175 119 aa9.09□□□□□ -0.95
PTPN4-201ENST00000263708 MUSTN1Q8IVN3 82 aa9.09□□□□□ -0.95
PTPN4-201ENST00000263708 J3QKU1 62 aa9.09□□□□□ -0.95
PTPN4-201ENST00000263708 NDUFA4O00483 81 aa9.09□□□□□ -0.95
PTPN4-201ENST00000263708 PRR30Q53SZ7 412 aaPredicted RBP9.09□□□□□ -0.95
PTPN4-201ENST00000263708 IGKV3D-7A0A0C4DH55 119 aa9.09□□□□□ -0.95
PTPN4-201ENST00000263708 LAIR2Q6ISS4 152 aa9.09□□□□□ -0.95
PTPN4-201ENST00000263708 DYNAPQ8N1N2 210 aa9.09□□□□□ -0.95
PTPN4-201ENST00000263708 KIF26AQ9ULI4 1882 aaPredicted RBP9.09□□□□□ -0.95
PTPN4-201ENST00000263708 CRYGSP22914 178 aa9.09□□□□□ -0.95
PTPN4-201ENST00000263708 TMEM14EPQ6UXP3 125 aa9.08□□□□□ -0.96
PTPN4-201ENST00000263708 SS18L2Q9UHA2 77 aa9.08□□□□□ -0.96
PTPN4-201ENST00000263708 FNDC1Q4ZHG4 1894 aaPredicted RBP9.08□□□□□ -0.96
PTPN4-201ENST00000263708 FREM1Q5H8C1 2179 aa9.08□□□□□ -0.96
PTPN4-201ENST00000263708 IGLV3-32A0A0A0MS00 114 aa9.08□□□□□ -0.96
PTPN4-201ENST00000263708 K7ERS5 55 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 186.3 ms