RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 NAT8BQ9UHF3 227 aa9.71□□□□□ -0.86
VAMP7-201ENST00000262640 IZUMO1RA6ND01 250 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 IGLV1-51P01701 117 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 CRISP2P16562 243 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 GDF5OSQ5U4N7 250 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 NEU1Q99519 415 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 SRD5A3Q9H8P0 318 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 ZNF256Q9Y2P7 627 aaPredicted RBP9.7□□□□□ -0.86
VAMP7-201ENST00000262640 XKRY2A2RUG3 117 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 TMEM189A5PLL7 270 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 DEFB131AP59861 70 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 ZFAND2AQ8N6M9 145 aa9.7□□□□□ -0.86
VAMP7-201ENST00000262640 JMJD1CQ15652 2540 aa9.69□□□□□ -0.86
VAMP7-201ENST00000262640 CD33P20138 364 aa9.69□□□□□ -0.86
VAMP7-201ENST00000262640 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
VAMP7-201ENST00000262640 MAP6D1Q9H9H5 199 aa9.69□□□□□ -0.86
VAMP7-201ENST00000262640 HIGD1CA8MV81 97 aa9.68□□□□□ -0.86
VAMP7-201ENST00000262640 APRG1Q8IVJ8 170 aa9.68□□□□□ -0.86
VAMP7-201ENST00000262640 NUP35Q8NFH5 326 aa9.68□□□□□ -0.86
VAMP7-201ENST00000262640 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
VAMP7-201ENST00000262640 GPX1P07203 203 aa9.68□□□□□ -0.86
VAMP7-201ENST00000262640 LEPP41159 167 aa9.68□□□□□ -0.86
VAMP7-201ENST00000262640 PRIMA1Q86XR5 153 aa9.68□□□□□ -0.86
VAMP7-201ENST00000262640 GTSF1Q8WW33 167 aa9.68□□□□□ -0.86
VAMP7-201ENST00000262640 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
VAMP7-201ENST00000262640 PRR9Q5T870 116 aa9.67□□□□□ -0.86
VAMP7-201ENST00000262640 ORM1P02763 201 aa9.67□□□□□ -0.86
VAMP7-201ENST00000262640 HLA-DRB4P13762 266 aa9.67□□□□□ -0.86
VAMP7-201ENST00000262640 FOXA3P55318 350 aaPredicted RBP9.67□□□□□ -0.86
VAMP7-201ENST00000262640 CMC4P56277 68 aaPredicted RBP9.67□□□□□ -0.86
VAMP7-201ENST00000262640 Q6AWC8 147 aa9.67□□□□□ -0.86
VAMP7-201ENST00000262640 HLA-DRB4X5D2U9 266 aa9.67□□□□□ -0.86
VAMP7-201ENST00000262640 TRAV21A0A0B4J279 112 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 KLLNB2CW77 178 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 GZMBP10144 247 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 TSPOP30536 169 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 RAB5BP61020 215 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 ZNF747Q9BV97 191 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 A8MTW9 85 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 J3KRW8 73 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 RNASE4P34096 147 aaKnown RBP9.66□□□□□ -0.86
VAMP7-201ENST00000262640 INSL3P51460 131 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 COX19Q49B96 90 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 ACTL10Q5JWF8 245 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 ATP5L2Q7Z4Y8 100 aa9.66□□□□□ -0.86
VAMP7-201ENST00000262640 TEP1Q99973 2627 aaKnown RBP9.66□□□□□ -0.86
VAMP7-201ENST00000262640 WNK1Q9H4A3 2382 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 TMSB15BA0A087X1C1 80 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 SPINK4O60575 86 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 ODF3L2Q3SX64 289 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 RASL11AQ6T310 242 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 PGLYRP4Q96LB8 373 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 OR11H12B2RN74 326 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 H3BMM0 161 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 IGKV3-20P01619 116 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 TRGC2P03986 189 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 C9orf66Q5T8R8 295 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 MRPL54Q6P161 138 aaKnown RBP9.65□□□□□ -0.86
VAMP7-201ENST00000262640 C11orf21Q9P2W6 132 aa9.65□□□□□ -0.86
VAMP7-201ENST00000262640 WDR73Q6P4I2 378 aa9.64□□□□□ -0.87
VAMP7-201ENST00000262640 AMTNQ6UX39 209 aa9.64□□□□□ -0.87
VAMP7-201ENST00000262640 FAM110AQ9BQ89 295 aa9.64□□□□□ -0.87
VAMP7-201ENST00000262640 MAST4O15021 2626 aa9.64□□□□□ -0.87
VAMP7-201ENST00000262640 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
VAMP7-201ENST00000262640 CDKN1BP46527 198 aa9.64□□□□□ -0.87
VAMP7-201ENST00000262640 BEAN1Q3B7T3 259 aa9.64□□□□□ -0.87
VAMP7-201ENST00000262640 GNB1LQ9BYB4 327 aa9.64□□□□□ -0.87
VAMP7-201ENST00000262640 C7orf71A4D174 169 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 KIR3DS1Q14943 382 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 CLUHP3Q96NS8 147 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 TRAPPC1Q9Y5R8 145 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 A0A1B0GXF2 115 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 MT-ND6P03923 174 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 ZNF124Q15973 351 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 C3orf56Q8N813 242 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 FER1L6-AS1Q8NA97 138 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 BORCS7Q96B45 105 aa9.63□□□□□ -0.87
VAMP7-201ENST00000262640 MCRIP2Q9BUT9 160 aaKnown RBP9.63□□□□□ -0.87
VAMP7-201ENST00000262640 A0A1B0GUT8 65 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 M0R2Z0 102 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 HBBP68871 147 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 Q6ZQT7 251 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 ZNF575Q86XF7 245 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 ZFP82Q8N141 532 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 TMEM158Q8WZ71 300 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 GRIFINA4D1Z8 144 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 SNURFLB1AK76 121 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 PHOX2AO14813 284 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 FRMD6-AS1P0C7T7 363 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 CTRLP40313 264 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 SPINK13Q1W4C9 94 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 GFI1BQ5VTD9 330 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 SHISA2Q6UWI4 295 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 LYZL1Q6UWQ5 148 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 C12orf54Q6X4T0 127 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 TMEM136Q6ZRR5 245 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 TPPP3Q9BW30 176 aa9.62□□□□□ -0.87
VAMP7-201ENST00000262640 NAGKQ9UJ70 344 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 520.6 ms