RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ZNF705BP0CI00 300 aaPredicted RBP16.9■□□□□ 0.3
SIX3-201ENST00000260653 COX8CQ7Z4L0 72 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 GTSF1Q8WW33 167 aa16.9■□□□□ 0.3
SIX3-201ENST00000260653 C2orf70A6NJV1 201 aa16.89■□□□□ 0.29
SIX3-201ENST00000260653 DEFB1P60022 68 aa16.89■□□□□ 0.29
SIX3-201ENST00000260653 TMEM208Q9BTX3 173 aa16.89■□□□□ 0.29
SIX3-201ENST00000260653 GZMBP10144 247 aa16.89■□□□□ 0.29
SIX3-201ENST00000260653 CD28P10747 220 aa16.89■□□□□ 0.29
SIX3-201ENST00000260653 PKIAP61925 76 aa16.89■□□□□ 0.29
SIX3-201ENST00000260653 OR4B1Q8NGF8 309 aa16.89■□□□□ 0.29
SIX3-201ENST00000260653 OR1N2Q8NGR9 330 aa16.89■□□□□ 0.29
SIX3-201ENST00000260653 ZNF80P51504 273 aaPredicted RBP16.88■□□□□ 0.29
SIX3-201ENST00000260653 DPF1Q92782 380 aa16.88■□□□□ 0.29
SIX3-201ENST00000260653 NDFIP1Q9BT67 221 aa16.88■□□□□ 0.29
SIX3-201ENST00000260653 DCANP1Q8TF63 244 aa16.88■□□□□ 0.29
SIX3-201ENST00000260653 TSTD3H0UI37 97 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 HAX1O00165 279 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 SH2D1AO60880 128 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 NDUFA6P56556 154 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 PYY3Q5JQD4 70 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 FAM162BQ5T6X4 162 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 TMEM78Q5T7P6 136 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 ADAMTSL5Q6ZMM2 481 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 C9orf47Q6ZRZ4 202 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 WFDC3Q8IUB2 231 aa16.87■□□□□ 0.29
SIX3-201ENST00000260653 A0A1W2PRX2 142 aa16.86■□□□□ 0.29
SIX3-201ENST00000260653 SNURFLB1AK76 121 aa16.86■□□□□ 0.29
SIX3-201ENST00000260653 DMRTA1Q5VZB9 504 aa16.86■□□□□ 0.29
SIX3-201ENST00000260653 CDPF1Q6NVV7 123 aa16.86■□□□□ 0.29
SIX3-201ENST00000260653 MS4A6AQ9H2W1 248 aa16.86■□□□□ 0.29
SIX3-201ENST00000260653 WNK1Q9H4A3 2382 aa16.86■□□□□ 0.29
SIX3-201ENST00000260653 ZNF138P52744 262 aa16.86■□□□□ 0.29
SIX3-201ENST00000260653 TFPI2P48307 235 aa16.85■□□□□ 0.29
SIX3-201ENST00000260653 JMJD8Q96S16 334 aa16.85■□□□□ 0.29
SIX3-201ENST00000260653 SMIM15Q7Z3B0 74 aa16.85■□□□□ 0.29
SIX3-201ENST00000260653 GFRA4Q9GZZ7 299 aa16.85■□□□□ 0.29
SIX3-201ENST00000260653 F6UB75 175 aa16.84■□□□□ 0.29
SIX3-201ENST00000260653 SRSF2Q01130 221 aaKnown RBP16.84■□□□□ 0.29
SIX3-201ENST00000260653 DLX4Q92988 240 aaPredicted RBP16.84■□□□□ 0.29
SIX3-201ENST00000260653 PGLYRP4Q96LB8 373 aa16.84■□□□□ 0.29
SIX3-201ENST00000260653 CITED2Q99967 270 aaPredicted RBP16.84■□□□□ 0.29
SIX3-201ENST00000260653 MRPL18Q9H0U6 180 aaKnown RBP16.84■□□□□ 0.29
SIX3-201ENST00000260653 TMEM136Q6ZRR5 245 aa16.84■□□□□ 0.29
SIX3-201ENST00000260653 GNB1LQ9BYB4 327 aa16.84■□□□□ 0.29
SIX3-201ENST00000260653 RAX2Q96IS3 184 aa16.83■□□□□ 0.28
SIX3-201ENST00000260653 OVOL1O14753 267 aa16.83■□□□□ 0.28
SIX3-201ENST00000260653 RBPMS2Q6ZRY4 209 aaKnown RBP16.83■□□□□ 0.28
SIX3-201ENST00000260653 OR9G4Q8NGQ1 327 aa16.83■□□□□ 0.28
SIX3-201ENST00000260653 SORL1Q92673 2214 aa16.82■□□□□ 0.28
SIX3-201ENST00000260653 TMSB15BA0A087X1C1 80 aa16.82■□□□□ 0.28
SIX3-201ENST00000260653 FAM231BA6NCW3 169 aa16.82■□□□□ 0.28
SIX3-201ENST00000260653 NDUFA7O95182 113 aa16.82■□□□□ 0.28
SIX3-201ENST00000260653 OR10J6PQ8NGY7 276 aa16.82■□□□□ 0.28
SIX3-201ENST00000260653 C2CD3Q4AC94 2353 aa16.82■□□□□ 0.28
SIX3-201ENST00000260653 M0QZ24 198 aa16.81■□□□□ 0.28
SIX3-201ENST00000260653 RNASE8Q8TDE3 154 aaKnown RBP16.81■□□□□ 0.28
SIX3-201ENST00000260653 ID1P41134 155 aa16.81■□□□□ 0.28
SIX3-201ENST00000260653 RNF114Q9Y508 228 aa16.81■□□□□ 0.28
SIX3-201ENST00000260653 TMEM189A5PLL7 270 aa16.8■□□□□ 0.28
SIX3-201ENST00000260653 HIST1H1AQ02539 215 aaPredicted RBP16.8■□□□□ 0.28
SIX3-201ENST00000260653 SAMD13Q5VXD3 122 aa16.8■□□□□ 0.28
SIX3-201ENST00000260653 OR8A1Q8NGG7 326 aa16.8■□□□□ 0.28
SIX3-201ENST00000260653 F8P00451 2351 aa16.8■□□□□ 0.28
SIX3-201ENST00000260653 GDF5OSQ5U4N7 250 aa16.8■□□□□ 0.28
SIX3-201ENST00000260653 PEMTQ9UBM1 199 aa16.8■□□□□ 0.28
SIX3-201ENST00000260653 A0A1B0GXF2 115 aa16.79■□□□□ 0.28
SIX3-201ENST00000260653 ZNF688P0C7X2 276 aa16.79■□□□□ 0.28
SIX3-201ENST00000260653 CAMPP49913 170 aa16.79■□□□□ 0.28
SIX3-201ENST00000260653 TSSC4Q9Y5U2 329 aaPredicted RBP16.79■□□□□ 0.28
SIX3-201ENST00000260653 MT-ND6P03923 174 aa16.79■□□□□ 0.28
SIX3-201ENST00000260653 COX19Q49B96 90 aa16.79■□□□□ 0.28
SIX3-201ENST00000260653 GFI1BQ5VTD9 330 aa16.79■□□□□ 0.28
SIX3-201ENST00000260653 ATP5L2Q7Z4Y8 100 aa16.79■□□□□ 0.28
SIX3-201ENST00000260653 PRO1933Q9H354 126 aa16.79■□□□□ 0.28
SIX3-201ENST00000260653 FABP5P3A8MUU1 101 aa16.78■□□□□ 0.28
SIX3-201ENST00000260653 K7EQG2 157 aa16.78■□□□□ 0.28
SIX3-201ENST00000260653 EREGO14944 169 aa16.78■□□□□ 0.28
SIX3-201ENST00000260653 FOXA3P55318 350 aaPredicted RBP16.78■□□□□ 0.28
SIX3-201ENST00000260653 RASL11AQ6T310 242 aa16.78■□□□□ 0.28
SIX3-201ENST00000260653 LINC00477Q96M19 166 aa16.78■□□□□ 0.28
SIX3-201ENST00000260653 HOXA5P20719 270 aa16.78■□□□□ 0.28
SIX3-201ENST00000260653 PROK1P58294 105 aa16.78■□□□□ 0.28
SIX3-201ENST00000260653 FHL3Q13643 280 aa16.78■□□□□ 0.28
SIX3-201ENST00000260653 XKRY2A2RUG3 117 aa16.77■□□□□ 0.28
SIX3-201ENST00000260653 TCF21O43680 179 aa16.77■□□□□ 0.28
SIX3-201ENST00000260653 PSMG4Q5JS54 123 aa16.77■□□□□ 0.28
SIX3-201ENST00000260653 PRR9Q5T870 116 aa16.77■□□□□ 0.28
SIX3-201ENST00000260653 TPPP3Q9BW30 176 aa16.77■□□□□ 0.28
SIX3-201ENST00000260653 CCL24O00175 119 aa16.77■□□□□ 0.28
SIX3-201ENST00000260653 HLA-DQA1P01909 254 aa16.77■□□□□ 0.28
SIX3-201ENST00000260653 PRR31Q5SQ13 230 aa16.77■□□□□ 0.28
SIX3-201ENST00000260653 ORM1P02763 201 aa16.76■□□□□ 0.27
SIX3-201ENST00000260653 CSN3P07498 182 aa16.76■□□□□ 0.27
SIX3-201ENST00000260653 HBBP68871 147 aa16.76■□□□□ 0.27
SIX3-201ENST00000260653 Q6ZQT7 251 aa16.76■□□□□ 0.27
SIX3-201ENST00000260653 LENEPQ9Y5L5 61 aa16.76■□□□□ 0.27
SIX3-201ENST00000260653 SLAQ13239 276 aa16.76■□□□□ 0.27
SIX3-201ENST00000260653 KIAA1644Q3SXP7 199 aa16.76■□□□□ 0.27
SIX3-201ENST00000260653 ZNF575Q86XF7 245 aa16.76■□□□□ 0.27
SIX3-201ENST00000260653 SSBP4Q9BWG4 385 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms