RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 FOXI2Q6ZQN5 318 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 NDUFA4L2Q9NRX3 87 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 CACNA1BQ00975 2339 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 LHBP01229 141 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 C5orf64Q2M2E5 130 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 UTF1Q5T230 341 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 RNASE13Q5GAN3 156 aaKnown RBP7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 A0A087WX48 190 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 THBDP07204 575 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 ZNF415Q09FC8 603 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 C11orf44Q8N8P7 122 aa7.78□□□□□ -1.16
CTDSPL2-201ENST00000260327 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 PFN2P35080 140 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 C17orf58Q2M2W7 97 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 NDUFA12Q9UI09 145 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 ARFGEF3Q5TH69 2177 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 J3QQQ9 107 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 TMEM141Q96I45 108 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 PRR25Q96S07 402 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 FRMPD3Q5JV73 1810 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 PDE6HQ13956 83 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 C17orf77Q96MU5 243 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 DENND4AQ7Z401 1863 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 COX6B1P14854 86 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 RPL36AP83881 106 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 TMEM190Q8WZ59 177 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 RPL36ALQ969Q0 106 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 RBM3P98179 157 aaKnown RBP7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 PEMTQ9UBM1 199 aa7.77□□□□□ -1.17
CTDSPL2-201ENST00000260327 A0A0G2JNJ9 132 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 SDHAF1A6NFY7 115 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 COL8A2P25067 703 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 TPSG1Q9NRR2 321 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 Q9UFV3 132 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 IGHV3-16A0A0C4DH30 117 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 WIPF2Q8TF74 440 aaPredicted RBP7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 C15orf65H3BRN8 121 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 CFC1BP0CG36 223 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 CFC1P0CG37 223 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 TRPT1Q86TN4 253 aaKnown RBP7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 TANC1Q9C0D5 1861 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 SMIM2Q9BVW6 85 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 SPRY2O43597 315 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 SYNJ2BPP57105 145 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 WT1-ASQ06250 92 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 KLK9Q9UKQ9 250 aa7.76□□□□□ -1.17
CTDSPL2-201ENST00000260327 IGHV3-38A0A0C4DH36 116 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 LTAP01374 205 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 GTF3C1Q12789 2109 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 DIAPH2-AS1Q14236 149 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 UBL5Q9BZL1 73 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 TP73-AS1Q9UF72 201 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 LYPD6Q86Y78 171 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 PRR20EP86478 221 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 PRR20CP86479 221 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 PRR20DP86480 221 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 PRR20BP86481 221 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 PRR20AP86496 221 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 RBMY1FQ15415 496 aaKnown RBP7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 UBE2E2Q96LR5 201 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 FGF23Q9GZV9 251 aaPredicted RBP7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 LINC01545Q5VT33 79 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 LY6G6EA0A0G2JKS1 128 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 FAM236AA0A1B0GUQ0 79 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 FAM236BA0A1B0GV22 79 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 RHPN1-AS1Q9BWJ2 59 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 U3KQA8 63 aa7.75□□□□□ -1.17
CTDSPL2-201ENST00000260327 FOXI1Q12951 378 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 ALPK3Q96L96 1907 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 TEX36Q5VZQ5 186 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 MSRB2Q9Y3D2 182 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 MBD3L4A6NDZ8 208 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 MBD3L3A6NE82 208 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 MBD3L5A6NJ08 208 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 NDUFB8O95169 186 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 IGHG4P01861 327 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 PLA2G5P39877 138 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 MBD3L2Q8NHZ7 208 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 RNF183Q96D59 192 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 TRBV7-1A0A0A6YYK4 115 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 BRD3OSQ6XYD6 125 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 PTH2Q96A98 100 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 EML6Q6ZMW3 1958 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 ABCA4P78363 2273 aa7.74□□□□□ -1.17
CTDSPL2-201ENST00000260327 I3L3M4 83 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 IGHG3P01860 377 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 RNF5Q99942 180 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 DYSFO75923 2080 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 COL4A3Q01955 1670 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 HERV-K104P63124 156 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 NCOA6Q14686 2063 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 NXPH4O95158 308 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 ZNF833PQ6ZTB9 187 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 KLHL30-AS1Q8NEE0 82 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 H3BRN7 92 aa7.73□□□□□ -1.17
CTDSPL2-201ENST00000260327 MED13Q9UHV7 2174 aa7.72□□□□□ -1.17
CTDSPL2-201ENST00000260327 CR1LQ2VPA4 569 aa7.72□□□□□ -1.17
CTDSPL2-201ENST00000260327 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
CTDSPL2-201ENST00000260327 KIF26AQ9ULI4 1882 aaPredicted RBP7.72□□□□□ -1.17
CTDSPL2-201ENST00000260327 EGR2P11161 476 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms