RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 ARL17AQ8IVW1 177 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 OR11H1Q8NG94 326 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 OR4X2Q8NGF9 303 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 OR11H2Q8NH07 326 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 SCGB3A1Q96QR1 104 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 JKAMPQ9P055 326 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 KALRNO60229 2985 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 K7ERJ3 54 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 SAP30O75446 220 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 ATP5LO75964 103 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 FSTL3O95633 263 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 RAB9AP51151 201 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 ZNF80P51504 273 aaPredicted RBP3.71□□□□□ -1.82
USP44-201ENST00000258499 SAMD5Q5TGI4 173 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 OR9G4Q8NGQ1 327 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 FANCD2OSQ96PS1 177 aa3.71□□□□□ -1.82
USP44-201ENST00000258499 USP9XQ93008 2570 aaPredicted RBP3.7□□□□□ -1.82
USP44-201ENST00000258499 TMEM8BA6NDV4 472 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.7□□□□□ -1.82
USP44-201ENST00000258499 K7EP13 123 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 CTSGP08311 255 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 SCGB1C2P0DMR2 95 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 RNASE4P34096 147 aaKnown RBP3.7□□□□□ -1.82
USP44-201ENST00000258499 EFNA4P52798 201 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 DTX2Q86UW9 622 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 TTC9CQ8N5M4 171 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 SRSF8Q9BRL6 282 aaKnown RBP3.7□□□□□ -1.82
USP44-201ENST00000258499 BPESC1Q9GZL8 116 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 HIVEP3Q5T1R4 2406 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 IGLV11-55A0A075B6I3 123 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 M0R1W7 72 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 CRYGBP07316 175 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 EMP1P54849 157 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 LY6DQ14210 128 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 LGALS9BQ3B8N2 356 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 KHDC1LQ5JSQ8 128 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 LGALS9CQ6DKI2 356 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 ARL6IP6Q8N6S5 226 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 C14orf178Q8N769 122 aaPredicted RBP3.7□□□□□ -1.82
USP44-201ENST00000258499 JMJD8Q96S16 334 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 SLC50A1Q9BRV3 221 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 A6NJY4 79 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 NPIPB6E9PJ23 425 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 TGFAP01135 160 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 DEFB1P60022 68 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 PAX8Q06710 450 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 FOXE3Q13461 319 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 CHAC1Q9BUX1 264 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 TACC2O95359 2948 aa3.7□□□□□ -1.82
USP44-201ENST00000258499 IGHV7-81A0A0B4J1V7 117 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 H7C2G1 150 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 APOMO95445 188 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 KLRB1Q12918 225 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 CFHR4Q92496 578 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 AGPAT4-IT1Q9H0P7 198 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 MRPL35Q9NZE8 188 aaKnown RBP3.69□□□□□ -1.82
USP44-201ENST00000258499 CYSLTR1Q9Y271 337 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 C9orf118A6NHY6 69 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 K7ENP7 123 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 CRXO43186 299 aaPredicted RBP3.69□□□□□ -1.82
USP44-201ENST00000258499 GAS8-AS1O95177 125 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 ASIPP42127 132 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 TCF15Q12870 199 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 LAGE3Q14657 143 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 OR1N2Q8NGR9 330 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 DMXL1Q9Y485 3027 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 CCDC168Q8NDH2 2452 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 WI2-2373I1.2A0A1W2PRP0 233 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 SRSF1Q07955 248 aaKnown RBP eCLIP3.69□□□□□ -1.82
USP44-201ENST00000258499 Q1RN00 199 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 MRGPRG-AS1Q2M3A8 158 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 CD300EQ496F6 205 aaPredicted RBP3.69□□□□□ -1.82
USP44-201ENST00000258499 TMEM170BQ5T4T1 132 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 C8orf86Q6ZUL3 223 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 NEGR1Q7Z3B1 354 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 OR11H6Q8NGC7 330 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 ZNF479Q96JC4 524 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 PIEZO1Q92508 2521 aa3.69□□□□□ -1.82
USP44-201ENST00000258499 H3BRM9 83 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 ZFP36P26651 326 aaKnown RBP3.68□□□□□ -1.82
USP44-201ENST00000258499 RBX1P62877 108 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 MINOS1Q5TGZ0 78 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 MRPL16Q9NX20 251 aaKnown RBP3.68□□□□□ -1.82
USP44-201ENST00000258499 ZNF256Q9Y2P7 627 aaPredicted RBP3.68□□□□□ -1.82
USP44-201ENST00000258499 MINOS1-NBL1R4GNA1 71 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 AKAP13Q12802 2813 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 TRAV41A0A0B4J266 112 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 LINC01548A6NM66 108 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 F6UB75 175 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 CDKN1BP46527 198 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 FXYD2P54710 66 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 IGF2-ASQ6U949 168 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 FAM159AQ6UWV7 190 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 AMTNQ6UX39 209 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 SONP18583 2426 aaKnown RBP3.68□□□□□ -1.82
USP44-201ENST00000258499 RAI1Q7Z5J4 1906 aaPredicted RBP3.68□□□□□ -1.82
USP44-201ENST00000258499 A0A1B0GWB2 263 aa3.68□□□□□ -1.82
USP44-201ENST00000258499 TNFRSF13BO14836 293 aaPredicted RBP3.68□□□□□ -1.82
USP44-201ENST00000258499 TNRC18O15417 2968 aaPredicted RBP3.68□□□□□ -1.82
USP44-201ENST00000258499 ZNF418Q8TF45 676 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms