RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 POLR3KQ9Y2Y1 108 aaPredicted RBP14.81□□□□□ -0.04
SMARCC1-201ENST00000254480 MALRD1Q5VYJ5 2156 aa14.8□□□□□ -0.04
SMARCC1-201ENST00000254480 SHISA9B4DS77 424 aa14.8□□□□□ -0.04
SMARCC1-201ENST00000254480 ATP6V0BQ99437 205 aa14.8□□□□□ -0.04
SMARCC1-201ENST00000254480 GNRH2O43555 120 aa14.8□□□□□ -0.04
SMARCC1-201ENST00000254480 CGB7P0DN87 165 aa14.8□□□□□ -0.04
SMARCC1-201ENST00000254480 EREGO14944 169 aa14.79□□□□□ -0.04
SMARCC1-201ENST00000254480 APRG1Q8IVJ8 170 aa14.79□□□□□ -0.04
SMARCC1-201ENST00000254480 ZNF492Q9P255 531 aa14.79□□□□□ -0.04
SMARCC1-201ENST00000254480 BDP1A6H8Y1 2624 aa14.79□□□□□ -0.04
SMARCC1-201ENST00000254480 MORN5Q5VZ52 161 aa14.79□□□□□ -0.04
SMARCC1-201ENST00000254480 IGLC1P0CG04 106 aa14.79□□□□□ -0.04
SMARCC1-201ENST00000254480 NPYP01303 97 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 NOP10Q9NPE3 64 aaKnown RBP14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 ANGP03950 147 aaKnown RBP14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 EDA2RQ9HAV5 297 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 V9GYV3 84 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 SPINK8P0C7L1 97 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 ADAMTSL5Q6ZMM2 481 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 Q8N8P6 123 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 THAP8Q8NA92 274 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 TMEM243Q9BU79 118 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 DLEU1O43261 78 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 ZFAND6Q6FIF0 208 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 IGHV7-4-1A0A0J9YVY3 117 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 HOXD3P31249 432 aaPredicted RBP14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 FOXE3Q13461 319 aa14.78□□□□□ -0.04
SMARCC1-201ENST00000254480 IGHV4-38-2P0DP08 117 aa14.77□□□□□ -0.04
SMARCC1-201ENST00000254480 IGHV1-24A0A0C4DH33 117 aa14.77□□□□□ -0.05
SMARCC1-201ENST00000254480 FXYD5Q96DB9 178 aa14.77□□□□□ -0.05
SMARCC1-201ENST00000254480 PLXNA4Q9HCM2 1894 aa14.77□□□□□ -0.05
SMARCC1-201ENST00000254480 TRAV25A0A0B4J276 109 aa14.77□□□□□ -0.05
SMARCC1-201ENST00000254480 E9PQ18 207 aa14.77□□□□□ -0.05
SMARCC1-201ENST00000254480 KLF12Q9Y4X4 402 aa14.77□□□□□ -0.05
SMARCC1-201ENST00000254480 RHODO00212 210 aa14.77□□□□□ -0.05
SMARCC1-201ENST00000254480 RITA1Q96K30 269 aa14.77□□□□□ -0.05
SMARCC1-201ENST00000254480 SNHG12Q9BXW3 62 aa14.77□□□□□ -0.05
SMARCC1-201ENST00000254480 MED13Q9UHV7 2174 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 PIP4P1Q86T03 277 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 NKAPP1Q8N9T2 125 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 FAM208BQ5VWN6 2430 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 NLRC5Q86WI3 1866 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 TSC2P49815 1807 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 SUMO4Q6EEV6 95 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 Q6ZQT7 251 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 SIGLEC8Q9NYZ4 499 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 IGHV2-5P01817 119 aa14.76□□□□□ -0.05
SMARCC1-201ENST00000254480 DYNAPQ8N1N2 210 aa14.75□□□□□ -0.05
SMARCC1-201ENST00000254480 SLURP1P55000 103 aa14.75□□□□□ -0.05
SMARCC1-201ENST00000254480 IGHV4-61A0A0C4DH41 118 aa14.75□□□□□ -0.05
SMARCC1-201ENST00000254480 LINC00311Q8N616 119 aa14.75□□□□□ -0.05
SMARCC1-201ENST00000254480 APOC4P55056 127 aa14.75□□□□□ -0.05
SMARCC1-201ENST00000254480 IGHV4-30-2A0A087WSY4 118 aa14.75□□□□□ -0.05
SMARCC1-201ENST00000254480 VWC2Q2TAL6 325 aa14.75□□□□□ -0.05
SMARCC1-201ENST00000254480 TMEM126AQ9H061 195 aa14.75□□□□□ -0.05
SMARCC1-201ENST00000254480 NACAE9PAV3 2078 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 Q9HAA7 133 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 PRSS29PA6NIE9 313 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 VOPP1Q96AW1 172 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 ANAPC1Q9H1A4 1944 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 FAM231BA6NCW3 169 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 ZNF491Q8N8L2 437 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 MRPL35Q9NZE8 188 aaKnown RBP14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 Q0VG73 95 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 ESM1Q9NQ30 184 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 CFPP27918 469 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 ZNF124Q15973 351 aa14.74□□□□□ -0.05
SMARCC1-201ENST00000254480 RPL32P62910 135 aaKnown RBP14.73□□□□□ -0.05
SMARCC1-201ENST00000254480 C11orf53Q8IXP5 236 aa14.73□□□□□ -0.05
SMARCC1-201ENST00000254480 TMEM190Q8WZ59 177 aa14.73□□□□□ -0.05
SMARCC1-201ENST00000254480 NBL1P41271 181 aa14.73□□□□□ -0.05
SMARCC1-201ENST00000254480 IGKV1OR2-108A0A075B7D4 117 aa14.73□□□□□ -0.05
SMARCC1-201ENST00000254480 Q6ZWC4 215 aa14.73□□□□□ -0.05
SMARCC1-201ENST00000254480 XCL1P47992 114 aa14.73□□□□□ -0.05
SMARCC1-201ENST00000254480 BLCAPP62952 87 aa14.72□□□□□ -0.05
SMARCC1-201ENST00000254480 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.72□□□□□ -0.05
SMARCC1-201ENST00000254480 IGKV2-29A2NJV5 120 aaPredicted RBP14.72□□□□□ -0.05
SMARCC1-201ENST00000254480 FGF23Q9GZV9 251 aaPredicted RBP14.72□□□□□ -0.05
SMARCC1-201ENST00000254480 CFHR4Q92496 578 aa14.72□□□□□ -0.05
SMARCC1-201ENST00000254480 J3QLI3 93 aa14.72□□□□□ -0.05
SMARCC1-201ENST00000254480 IGHV2-70P01814 119 aa14.72□□□□□ -0.05
SMARCC1-201ENST00000254480 TMEM141Q96I45 108 aa14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 NDUFA12Q9UI09 145 aa14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 SMIM27A0A1W2PRY6 76 aa14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 UBE2V1Q13404 147 aa14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 CCL24O00175 119 aa14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 A8MWP6 167 aa14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 KLF5Q13887 457 aaPredicted RBP14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 MAJINQ3KP22 176 aa14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 SCRT2Q9NQ03 307 aa14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 U3KQE9 123 aa14.71□□□□□ -0.05
SMARCC1-201ENST00000254480 PCNX2A6NKB5 2137 aa14.71□□□□□ -0.06
SMARCC1-201ENST00000254480 K7ERJ3 54 aa14.71□□□□□ -0.06
SMARCC1-201ENST00000254480 K7EN84 100 aa14.7□□□□□ -0.06
SMARCC1-201ENST00000254480 GATA1P15976 413 aaPredicted RBP14.7□□□□□ -0.06
SMARCC1-201ENST00000254480 VPREB3Q9UKI3 123 aa14.7□□□□□ -0.06
SMARCC1-201ENST00000254480 IGLC7A0M8Q6 106 aa14.7□□□□□ -0.06
SMARCC1-201ENST00000254480 PLXNA2O75051 1894 aa14.7□□□□□ -0.06
SMARCC1-201ENST00000254480 DKK2Q9UBU2 259 aa14.7□□□□□ -0.06
SMARCC1-201ENST00000254480 IGKV2D-24A0A075B6R9 120 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms