RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 C20orf173Q96LM9 149 aa13.29□□□□□ -0.28
LRFN3-201ENST00000246529 MSMBP08118 114 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 DEFB1P60022 68 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 LINC01559Q495D7 138 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 COL5A1-AS1Q5SY13 56 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 TMEM78Q5T7P6 136 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 PRSS57Q6UWY2 283 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 RNF185Q96GF1 192 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 FOXE3Q13461 319 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 OR8A1Q8NGG7 326 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 GLMPQ8WWB7 406 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 TMEM208Q9BTX3 173 aa13.28□□□□□ -0.28
LRFN3-201ENST00000246529 A6NDX4 124 aa13.27□□□□□ -0.29
LRFN3-201ENST00000246529 NDUFS8O00217 210 aa13.27□□□□□ -0.29
LRFN3-201ENST00000246529 IGF1P05019 195 aa13.27□□□□□ -0.29
LRFN3-201ENST00000246529 HIF1ANQ9NWT6 349 aa13.27□□□□□ -0.29
LRFN3-201ENST00000246529 MYO18BQ8IUG5 2567 aa13.27□□□□□ -0.29
LRFN3-201ENST00000246529 J3KRW8 73 aa13.27□□□□□ -0.29
LRFN3-201ENST00000246529 SRSF2Q01130 221 aaKnown RBP13.27□□□□□ -0.29
LRFN3-201ENST00000246529 PF4V1P10720 104 aa13.26□□□□□ -0.29
LRFN3-201ENST00000246529 LINC01545Q5VT33 79 aa13.26□□□□□ -0.29
LRFN3-201ENST00000246529 DMRTA1Q5VZB9 504 aa13.26□□□□□ -0.29
LRFN3-201ENST00000246529 MRPS16Q9Y3D3 137 aaKnown RBP13.26□□□□□ -0.29
LRFN3-201ENST00000246529 ACACBO00763 2458 aa13.26□□□□□ -0.29
LRFN3-201ENST00000246529 IGHG2P01859 326 aa13.26□□□□□ -0.29
LRFN3-201ENST00000246529 CYB5R2Q6BCY4 276 aa13.26□□□□□ -0.29
LRFN3-201ENST00000246529 GPHB5Q86YW7 130 aa13.26□□□□□ -0.29
LRFN3-201ENST00000246529 ST20Q9HBF5 79 aa13.26□□□□□ -0.29
LRFN3-201ENST00000246529 IGKV3-7A0A075B6H7 116 aa13.25□□□□□ -0.29
LRFN3-201ENST00000246529 GATA1P15976 413 aaPredicted RBP13.25□□□□□ -0.29
LRFN3-201ENST00000246529 EVI2AP22794 236 aa13.25□□□□□ -0.29
LRFN3-201ENST00000246529 PRR9Q5T870 116 aa13.25□□□□□ -0.29
LRFN3-201ENST00000246529 Q6ZVH6 145 aa13.25□□□□□ -0.29
LRFN3-201ENST00000246529 CNFNQ9BYD5 112 aa13.25□□□□□ -0.29
LRFN3-201ENST00000246529 WFDC3Q8IUB2 231 aa13.24□□□□□ -0.29
LRFN3-201ENST00000246529 ZNF738Q8NE65 137 aa13.24□□□□□ -0.29
LRFN3-201ENST00000246529 HSBP1L1C9JCN9 74 aa13.23□□□□□ -0.29
LRFN3-201ENST00000246529 C9orf47Q6ZRZ4 202 aa13.23□□□□□ -0.29
LRFN3-201ENST00000246529 ZFYVE26Q68DK2 2539 aa13.23□□□□□ -0.29
LRFN3-201ENST00000246529 FBN2P35556 2912 aa13.23□□□□□ -0.29
LRFN3-201ENST00000246529 PRB1P04280 392 aa13.23□□□□□ -0.29
LRFN3-201ENST00000246529 NPSP0C0P6 89 aa13.23□□□□□ -0.29
LRFN3-201ENST00000246529 HIST1H1AQ02539 215 aaPredicted RBP13.23□□□□□ -0.29
LRFN3-201ENST00000246529 OR4X2Q8NGF9 303 aa13.23□□□□□ -0.29
LRFN3-201ENST00000246529 MRPL53Q96EL3 112 aaKnown RBP13.23□□□□□ -0.29
LRFN3-201ENST00000246529 RPL11P62913 178 aaKnown RBP13.22□□□□□ -0.29
LRFN3-201ENST00000246529 ANKRD39Q53RE8 183 aa13.22□□□□□ -0.29
LRFN3-201ENST00000246529 SCRT2Q9NQ03 307 aa13.22□□□□□ -0.29
LRFN3-201ENST00000246529 IGHV7-4-1A0A0J9YVY3 117 aa13.22□□□□□ -0.29
LRFN3-201ENST00000246529 NDUFA4O00483 81 aa13.22□□□□□ -0.29
LRFN3-201ENST00000246529 DLEU1O43261 78 aa13.22□□□□□ -0.29
LRFN3-201ENST00000246529 SPRY2O43597 315 aa13.22□□□□□ -0.29
LRFN3-201ENST00000246529 EDN2P20800 178 aa13.22□□□□□ -0.29
LRFN3-201ENST00000246529 TCTAP57738 103 aa13.22□□□□□ -0.29
LRFN3-201ENST00000246529 MAPK1IP1LQ8NDC0 245 aa13.21□□□□□ -0.29
LRFN3-201ENST00000246529 ATP6V0BQ99437 205 aa13.21□□□□□ -0.29
LRFN3-201ENST00000246529 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.21□□□□□ -0.29
LRFN3-201ENST00000246529 TCF21O43680 179 aa13.21□□□□□ -0.29
LRFN3-201ENST00000246529 HBDP02042 147 aa13.21□□□□□ -0.29
LRFN3-201ENST00000246529 TM4SF20Q53R12 229 aa13.21□□□□□ -0.29
LRFN3-201ENST00000246529 CBY1Q9Y3M2 126 aa13.21□□□□□ -0.29
LRFN3-201ENST00000246529 POLQO75417 2590 aa13.21□□□□□ -0.3
LRFN3-201ENST00000246529 F6UB75 175 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 SLC25A34Q6PIV7 304 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 C9orf139Q6ZV77 190 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 TRAV26-2A0A0B4J265 109 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 SNAI2O43623 268 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 TNFRSF6BO95407 300 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 SRD5A1P18405 259 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 CACNG7P62955 275 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 USMG5Q96IX5 58 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 NPFFR1Q9GZQ6 430 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 CENPEQ02224 2701 aa13.2□□□□□ -0.3
LRFN3-201ENST00000246529 B4DSR2 109 aa13.19□□□□□ -0.3
LRFN3-201ENST00000246529 SOCS3O14543 225 aa13.19□□□□□ -0.3
LRFN3-201ENST00000246529 MPV17L2Q567V2 206 aa13.19□□□□□ -0.3
LRFN3-201ENST00000246529 C18orf15Q96N68 181 aa13.19□□□□□ -0.3
LRFN3-201ENST00000246529 CSPG4Q6UVK1 2322 aa13.19□□□□□ -0.3
LRFN3-201ENST00000246529 MAP1LC3AQ9H492 121 aa13.19□□□□□ -0.3
LRFN3-201ENST00000246529 GOLT1BQ9Y3E0 138 aa13.19□□□□□ -0.3
LRFN3-201ENST00000246529 H3BVH4 76 aa13.18□□□□□ -0.3
LRFN3-201ENST00000246529 UFC1Q9Y3C8 167 aa13.18□□□□□ -0.3
LRFN3-201ENST00000246529 IGLV1-40P01703 118 aa13.18□□□□□ -0.3
LRFN3-201ENST00000246529 IGHV4-59P01825 116 aa13.18□□□□□ -0.3
LRFN3-201ENST00000246529 KIR3DS1Q14943 382 aa13.18□□□□□ -0.3
LRFN3-201ENST00000246529 C10orf99Q6UWK7 81 aa13.18□□□□□ -0.3
LRFN3-201ENST00000246529 RHPN1-AS1Q9BWJ2 59 aa13.17□□□□□ -0.3
LRFN3-201ENST00000246529 H3BUA1 57 aa13.17□□□□□ -0.3
LRFN3-201ENST00000246529 DEFB112Q30KQ8 113 aa13.17□□□□□ -0.3
LRFN3-201ENST00000246529 CFAP161Q6P656 301 aa13.17□□□□□ -0.3
LRFN3-201ENST00000246529 ZFAND2AQ8N6M9 145 aa13.17□□□□□ -0.3
LRFN3-201ENST00000246529 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
LRFN3-201ENST00000246529 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
LRFN3-201ENST00000246529 USP9YO00507 2555 aaPredicted RBP13.17□□□□□ -0.3
LRFN3-201ENST00000246529 PPBPP02775 128 aa13.16□□□□□ -0.3
LRFN3-201ENST00000246529 SPANXN1Q5VSR9 72 aa13.16□□□□□ -0.3
LRFN3-201ENST00000246529 ZNF462Q96JM2 2506 aa13.16□□□□□ -0.3
LRFN3-201ENST00000246529 NUDT3O95989 172 aa13.16□□□□□ -0.3
LRFN3-201ENST00000246529 LEPP41159 167 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms