RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 UBE2WQ96B02 151 aa7.36□□□□□ -1.23
SRSF6-201ENST00000244020 ARRDC1-AS1Q9H2J1 176 aa7.36□□□□□ -1.23
SRSF6-201ENST00000244020 TMEM8BA6NDV4 472 aa7.36□□□□□ -1.23
SRSF6-201ENST00000244020 ZNF415Q09FC8 603 aa7.36□□□□□ -1.23
SRSF6-201ENST00000244020 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
SRSF6-201ENST00000244020 DKK2Q9UBU2 259 aa7.36□□□□□ -1.23
SRSF6-201ENST00000244020 PKIGQ9Y2B9 76 aa7.36□□□□□ -1.23
SRSF6-201ENST00000244020 FSTL3O95633 263 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 SRSF1Q07955 248 aaKnown RBP eCLIP7.35□□□□□ -1.238e-12■■■□□ 18.3
SRSF6-201ENST00000244020 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 IGHV3OR16-12A0A075B7B8 117 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 SIVA1O15304 175 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 RUSC1-AS1Q66K80 236 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 C17orf77Q96MU5 243 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 COLQQ9Y215 455 aaPredicted RBP7.35□□□□□ -1.23
SRSF6-201ENST00000244020 FGF6P10767 208 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 TMEM200BQ69YZ2 307 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 Q71RC1 249 aaPredicted RBP7.35□□□□□ -1.23
SRSF6-201ENST00000244020 NEGR1Q7Z3B1 354 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 RNF182Q8N6D2 247 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 TMEM133Q9H2Q1 129 aa7.35□□□□□ -1.23
SRSF6-201ENST00000244020 PCSK5Q92824 1860 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 SPAARA0A1B0GVQ0 90 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 SLC25A20O43772 301 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 APOBEC3AP31941 199 aaPredicted RBP7.34□□□□□ -1.23
SRSF6-201ENST00000244020 RITA1Q96K30 269 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 SPRY4Q9C004 299 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 FAM104BQ5XKR9 115 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 TMEM126AQ9H061 195 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 GATD1Q8NB37 220 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 PTH2Q96A98 100 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 C8orf49Q96NF6 230 aa7.34□□□□□ -1.23
SRSF6-201ENST00000244020 INS-IGF2F8WCM5 200 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 RBM3P98179 157 aaKnown RBP7.33□□□□□ -1.24
SRSF6-201ENST00000244020 PAPPA-AS1Q5QFB9 102 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 FDCSPQ8NFU4 85 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 SPANXA1Q9NS26 97 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 OTOGLQ3ZCN5 2332 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 TRAV13-1A0A0B4J241 112 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 TRAV17A0A0B4J275 112 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 MRPL51Q4U2R6 128 aaKnown RBP7.33□□□□□ -1.24
SRSF6-201ENST00000244020 A0A1W2PNU3 283 aaPredicted RBP7.33□□□□□ -1.24
SRSF6-201ENST00000244020 NDUFS7O75251 213 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 GATA4P43694 442 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 C12orf74Q32Q52 190 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 FAM159AQ6UWV7 190 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 FXYD2P54710 66 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 METTL26Q96S19 204 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 SMPXQ9UHP9 88 aa7.33□□□□□ -1.24
SRSF6-201ENST00000244020 TRBV19A0A075B6N1 114 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 FABP5P3A8MUU1 101 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 IGHG3P01860 377 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 HLA-DRB4P13762 266 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 SLC25A16P16260 332 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 CNTFRP26992 372 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 TMEM75Q8N9X5 138 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 OR11H6Q8NGC7 330 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 RAB1BQ9H0U4 201 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 HLA-DRB4X5D2U9 266 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 NPYP01303 97 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 IGLV2-11P01706 119 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 C1orf210Q8IVY1 113 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 IGLV2-23P01705 113 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 LAGE3Q14657 143 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 Q8TAT8 98 aa7.32□□□□□ -1.24
SRSF6-201ENST00000244020 TNRC18O15417 2968 aaPredicted RBP7.32□□□□□ -1.24
SRSF6-201ENST00000244020 SPG11Q96JI7 2443 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 CDX4O14627 284 aaPredicted RBP7.31□□□□□ -1.24
SRSF6-201ENST00000244020 SH2D1AO60880 128 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 TMEM14CQ9P0S9 112 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 A0A096LNJ9 63 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 TRAV12-1A0A0B4J245 112 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 A0A0U1RQV1 116 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 FAM236AA0A1B0GUQ0 79 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 FAM236BA0A1B0GV22 79 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 MT-ATP8P03928 68 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 CRYGCP07315 174 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 LINC00574Q9H8X3 128 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 IGLV3-9A0A075B6K5 115 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 LGALS1P09382 135 aaKnown RBP7.31□□□□□ -1.24
SRSF6-201ENST00000244020 FAM27E3Q08E93 113 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 COPS9Q8WXC6 57 aa7.31□□□□□ -1.24
SRSF6-201ENST00000244020 IGKV2-40A0A087WW87 121 aaPredicted RBP7.3□□□□□ -1.24
SRSF6-201ENST00000244020 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.3□□□□□ -1.24
SRSF6-201ENST00000244020 CEACAM4O75871 244 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 IGKV2D-40P01614 121 aaPredicted RBP7.3□□□□□ -1.24
SRSF6-201ENST00000244020 PRB2P02812 416 aaPredicted RBP7.3□□□□□ -1.24
SRSF6-201ENST00000244020 CRIP1P50238 77 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 FOXC1Q12948 553 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 CEND1Q8N111 149 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 RNF125Q96EQ8 232 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 MRPL35Q9NZE8 188 aaKnown RBP7.3□□□□□ -1.24
SRSF6-201ENST00000244020 H7C1H1 209 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 ASIPP42127 132 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 ZNF474Q6S9Z5 364 aaPredicted RBP7.3□□□□□ -1.24
SRSF6-201ENST00000244020 SIGLEC9Q9Y336 463 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 SHANK2-AS3Q9BTD1 123 aa7.3□□□□□ -1.24
SRSF6-201ENST00000244020 J3KT08 172 aa7.29□□□□□ -1.24
SRSF6-201ENST00000244020 PRRG2O14669 202 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms