RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 TACC2O95359 2948 aa12.32□□□□□ -0.44
DDX1-201ENST00000233084 PLCE1Q9P212 2302 aa12.32□□□□□ -0.44
DDX1-201ENST00000233084 TRBV7-3A0A075B6L6 115 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 IGKV2-40A0A087WW87 121 aaPredicted RBP12.31□□□□□ -0.44
DDX1-201ENST00000233084 LINC01549A6NIU2 74 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 H3BVH4 76 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 IGKV2D-40P01614 121 aaPredicted RBP12.31□□□□□ -0.44
DDX1-201ENST00000233084 CNTFRP26992 372 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 VMA21Q3ZAQ7 101 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 CARD19Q96LW7 228 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 TMEM14CQ9P0S9 112 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 TAL2Q16559 108 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 TRBV6-1A0A0K0K1D8 114 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 ATP5LO75964 103 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 CNIH1O95406 144 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 HERV-K104P63124 156 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 PSMG4Q5JS54 123 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 RNF7Q9UBF6 113 aa12.31□□□□□ -0.44
DDX1-201ENST00000233084 BBC3Q96PG8 261 aaPredicted RBP12.3□□□□□ -0.44
DDX1-201ENST00000233084 ROS1P08922 2347 aa12.3□□□□□ -0.44
DDX1-201ENST00000233084 RPL27AP46776 148 aaKnown RBP12.3□□□□□ -0.44
DDX1-201ENST00000233084 ZFAND6Q6FIF0 208 aa12.3□□□□□ -0.44
DDX1-201ENST00000233084 S4R3C0 116 aa12.3□□□□□ -0.44
DDX1-201ENST00000233084 ORM1P02763 201 aa12.29□□□□□ -0.44
DDX1-201ENST00000233084 ZNF80P51504 273 aaPredicted RBP12.29□□□□□ -0.44
DDX1-201ENST00000233084 EFNA4P52798 201 aa12.29□□□□□ -0.44
DDX1-201ENST00000233084 PRB3Q04118 309 aaPredicted RBP12.29□□□□□ -0.44
DDX1-201ENST00000233084 CDSNQ15517 529 aa12.29□□□□□ -0.44
DDX1-201ENST00000233084 MRGPRG-AS1Q2M3A8 158 aa12.29□□□□□ -0.44
DDX1-201ENST00000233084 TEX29Q8N6K0 151 aa12.29□□□□□ -0.44
DDX1-201ENST00000233084 ATP6V0E2Q8NHE4 81 aa12.29□□□□□ -0.44
DDX1-201ENST00000233084 FLNCQ14315 2725 aa12.29□□□□□ -0.44
DDX1-201ENST00000233084 KMT2BQ9UMN6 2715 aaPredicted RBP12.29□□□□□ -0.44
DDX1-201ENST00000233084 M0R1B8 84 aa12.29□□□□□ -0.44
DDX1-201ENST00000233084 MYOZ3Q8TDC0 251 aa12.29□□□□□ -0.44
DDX1-201ENST00000233084 NXT2Q9NPJ8 142 aaKnown RBP12.29□□□□□ -0.44
DDX1-201ENST00000233084 SPTBN1Q01082 2364 aaKnown RBP12.28□□□□□ -0.44
DDX1-201ENST00000233084 TRBV20-1A0A075B6N2 111 aa12.28□□□□□ -0.44
DDX1-201ENST00000233084 IGFL4Q6B9Z1 124 aa12.28□□□□□ -0.44
DDX1-201ENST00000233084 CTSZQ9UBR2 303 aa12.28□□□□□ -0.44
DDX1-201ENST00000233084 HLA-DRB4P13762 266 aa12.28□□□□□ -0.44
DDX1-201ENST00000233084 HLA-DRB4X5D2U9 266 aa12.28□□□□□ -0.44
DDX1-201ENST00000233084 GNLYP22749 145 aa12.27□□□□□ -0.44
DDX1-201ENST00000233084 SMIM20Q8N5G0 67 aa12.27□□□□□ -0.44
DDX1-201ENST00000233084 PPDPFLQ8WWR9 84 aa12.27□□□□□ -0.44
DDX1-201ENST00000233084 KLK15Q9H2R5 256 aa12.27□□□□□ -0.44
DDX1-201ENST00000233084 ANKHD1Q8IWZ3 2542 aaKnown RBP12.27□□□□□ -0.44
DDX1-201ENST00000233084 A6NJY4 79 aa12.27□□□□□ -0.45
DDX1-201ENST00000233084 THBDP07204 575 aa12.27□□□□□ -0.45
DDX1-201ENST00000233084 TNFAIP6P98066 277 aaPredicted RBP12.27□□□□□ -0.45
DDX1-201ENST00000233084 C3orf36Q3SXR2 165 aa12.27□□□□□ -0.45
DDX1-201ENST00000233084 SHANK2-AS3Q9BTD1 123 aa12.27□□□□□ -0.45
DDX1-201ENST00000233084 AAMDCQ9H7C9 122 aa12.27□□□□□ -0.45
DDX1-201ENST00000233084 TRAV26-2A0A0B4J265 109 aa12.26□□□□□ -0.45
DDX1-201ENST00000233084 TRBV7-9A0A0J9YWB2 115 aa12.26□□□□□ -0.45
DDX1-201ENST00000233084 MYMXA0A1B0GTQ4 84 aa12.26□□□□□ -0.45
DDX1-201ENST00000233084 IGKV1-17P01599 117 aa12.26□□□□□ -0.45
DDX1-201ENST00000233084 DLX1P56177 255 aa12.26□□□□□ -0.45
DDX1-201ENST00000233084 LINC00574Q9H8X3 128 aa12.26□□□□□ -0.45
DDX1-201ENST00000233084 PRB1P04280 392 aa12.26□□□□□ -0.45
DDX1-201ENST00000233084 FBXL19-AS1Q494R0 122 aa12.26□□□□□ -0.45
DDX1-201ENST00000233084 ZNF462Q96JM2 2506 aa12.25□□□□□ -0.45
DDX1-201ENST00000233084 TEN1Q86WV5 123 aa12.25□□□□□ -0.45
DDX1-201ENST00000233084 TNFRSF13BO14836 293 aaPredicted RBP12.25□□□□□ -0.45
DDX1-201ENST00000233084 NHLRC4P0CG21 123 aaPredicted RBP12.25□□□□□ -0.45
DDX1-201ENST00000233084 GRNP28799 593 aaKnown RBP12.25□□□□□ -0.45
DDX1-201ENST00000233084 CHD6Q8TD26 2715 aa12.25□□□□□ -0.45
DDX1-201ENST00000233084 A0A087WX48 190 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 SRSF9Q13242 221 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX1-201ENST00000233084 TMEM200BQ69YZ2 307 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 H3BRN7 92 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 ZNF688P0C7X2 276 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 PRTN3P24158 256 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 CCL8P80075 99 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 SCGB1D4Q6XE38 83 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 DTX2Q86UW9 622 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 PRR25Q96S07 402 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 MYO18BQ8IUG5 2567 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 CCDC179H3BU77 68 aa12.24□□□□□ -0.45
DDX1-201ENST00000233084 LGALS1P09382 135 aaKnown RBP12.24□□□□□ -0.45
DDX1-201ENST00000233084 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
DDX1-201ENST00000233084 CD40P25942 277 aa12.23□□□□□ -0.45
DDX1-201ENST00000233084 Q8N8P6 123 aa12.23□□□□□ -0.45
DDX1-201ENST00000233084 RNASE6Q93091 150 aaKnown RBP12.23□□□□□ -0.45
DDX1-201ENST00000233084 TCL1BO95988 128 aa12.23□□□□□ -0.45
DDX1-201ENST00000233084 TMEM78Q5T7P6 136 aa12.23□□□□□ -0.45
DDX1-201ENST00000233084 LYPD1Q8N2G4 141 aa12.23□□□□□ -0.45
DDX1-201ENST00000233084 ANKRD29Q8N6D5 301 aa12.23□□□□□ -0.45
DDX1-201ENST00000233084 RNF125Q96EQ8 232 aa12.23□□□□□ -0.45
DDX1-201ENST00000233084 IGHV1-46P01743 117 aa12.22□□□□□ -0.45
DDX1-201ENST00000233084 TRGV3P03979 118 aa12.22□□□□□ -0.45
DDX1-201ENST00000233084 PLNP26678 52 aa12.22□□□□□ -0.45
DDX1-201ENST00000233084 HLA-DMBP28068 263 aa12.22□□□□□ -0.45
DDX1-201ENST00000233084 PLGLAQ15195 96 aa12.22□□□□□ -0.45
DDX1-201ENST00000233084 ZNF575Q86XF7 245 aa12.22□□□□□ -0.45
DDX1-201ENST00000233084 AJUBAQ96IF1 538 aa12.22□□□□□ -0.45
DDX1-201ENST00000233084 LAGE3Q14657 143 aa12.22□□□□□ -0.45
DDX1-201ENST00000233084 ZNF491Q8N8L2 437 aa12.22□□□□□ -0.45
DDX1-201ENST00000233084 PLEKHB2Q96CS7 222 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms