RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 C17orf77Q96MU5 243 aa15.97■□□□□ 0.15
SNX3-201ENST00000230085 JMJD8Q96S16 334 aa15.97■□□□□ 0.15
SNX3-201ENST00000230085 TLN2Q9Y4G6 2542 aa15.97■□□□□ 0.15
SNX3-201ENST00000230085 A0A0G2JLM5 398 aa15.96■□□□□ 0.15
SNX3-201ENST00000230085 SH2D1AO60880 128 aa15.96■□□□□ 0.15
SNX3-201ENST00000230085 LINC01356Q8N9X3 169 aa15.96■□□□□ 0.15
SNX3-201ENST00000230085 OR8A1Q8NGG7 326 aa15.96■□□□□ 0.15
SNX3-201ENST00000230085 FBXL15Q9H469 300 aa15.96■□□□□ 0.15
SNX3-201ENST00000230085 TGFAP01135 160 aa15.95■□□□□ 0.14
SNX3-201ENST00000230085 MSMBP08118 114 aa15.95■□□□□ 0.14
SNX3-201ENST00000230085 CACNG7P62955 275 aa15.95■□□□□ 0.14
SNX3-201ENST00000230085 KRTAP1-1Q07627 177 aa15.95■□□□□ 0.14
SNX3-201ENST00000230085 NPBQ8NG41 125 aa15.95■□□□□ 0.14
SNX3-201ENST00000230085 NDUFA3O95167 84 aa15.95■□□□□ 0.14
SNX3-201ENST00000230085 BMI1P35226 326 aa15.95■□□□□ 0.14
SNX3-201ENST00000230085 AMN1Q8IY45 258 aa15.95■□□□□ 0.14
SNX3-201ENST00000230085 MEGF9Q9H1U4 602 aa15.95■□□□□ 0.14
SNX3-201ENST00000230085 A0A1W2PPM0 123 aa15.94■□□□□ 0.14
SNX3-201ENST00000230085 C8orf49Q96NF6 230 aa15.94■□□□□ 0.14
SNX3-201ENST00000230085 SMPXQ9UHP9 88 aa15.94■□□□□ 0.14
SNX3-201ENST00000230085 TMEM213A2RRL7 107 aa15.93■□□□□ 0.14
SNX3-201ENST00000230085 NPIPB5A8MRT5 1133 aa15.93■□□□□ 0.14
SNX3-201ENST00000230085 IL4P05112 153 aa15.93■□□□□ 0.14
SNX3-201ENST00000230085 RPEQ96AT9 228 aa15.93■□□□□ 0.14
SNX3-201ENST00000230085 PRR25Q96S07 402 aa15.93■□□□□ 0.14
SNX3-201ENST00000230085 HIF1ANQ9NWT6 349 aa15.93■□□□□ 0.14
SNX3-201ENST00000230085 LY6G6DO95868 133 aa15.92■□□□□ 0.14
SNX3-201ENST00000230085 RPL7P18124 248 aaKnown RBP15.92■□□□□ 0.14
SNX3-201ENST00000230085 NXT2Q9NPJ8 142 aaKnown RBP15.92■□□□□ 0.14
SNX3-201ENST00000230085 THYN1Q9P016 225 aa15.92■□□□□ 0.14
SNX3-201ENST00000230085 IGLV11-55A0A075B6I3 123 aa15.91■□□□□ 0.14
SNX3-201ENST00000230085 H3BUT2 72 aa15.91■□□□□ 0.14
SNX3-201ENST00000230085 M0R3E3 92 aa15.91■□□□□ 0.14
SNX3-201ENST00000230085 APELAP0DMC3 54 aa15.91■□□□□ 0.14
SNX3-201ENST00000230085 S100A7P31151 101 aa15.91■□□□□ 0.14
SNX3-201ENST00000230085 PRSS47A8MTI9 375 aa15.9■□□□□ 0.14
SNX3-201ENST00000230085 NPYP01303 97 aa15.9■□□□□ 0.14
SNX3-201ENST00000230085 EVI2AP22794 236 aa15.9■□□□□ 0.14
SNX3-201ENST00000230085 FCGR2BP31994 310 aaPredicted RBP15.9■□□□□ 0.14
SNX3-201ENST00000230085 CKS2P33552 79 aa15.9■□□□□ 0.14
SNX3-201ENST00000230085 FCER1GP30273 86 aa15.9■□□□□ 0.14
SNX3-201ENST00000230085 MFAP4P55083 255 aa15.9■□□□□ 0.14
SNX3-201ENST00000230085 ZNF575Q86XF7 245 aa15.9■□□□□ 0.14
SNX3-201ENST00000230085 LY6G5BQ8NDX9 201 aa15.9■□□□□ 0.14
SNX3-201ENST00000230085 MAP1LC3AQ9H492 121 aa15.9■□□□□ 0.14
SNX3-201ENST00000230085 NBR2O15453 112 aa15.89■□□□□ 0.13
SNX3-201ENST00000230085 SNAI2O43623 268 aa15.89■□□□□ 0.13
SNX3-201ENST00000230085 RNF185Q96GF1 192 aa15.89■□□□□ 0.13
SNX3-201ENST00000230085 HHLA3Q9XRX5 114 aa15.89■□□□□ 0.13
SNX3-201ENST00000230085 ZFHX3Q15911 3703 aa15.89■□□□□ 0.13
SNX3-201ENST00000230085 PPIAL4CA0A0B4J2A2 164 aa15.88■□□□□ 0.13
SNX3-201ENST00000230085 LOC389332A0A1B0GUA5 103 aa15.88■□□□□ 0.13
SNX3-201ENST00000230085 PPIAL4GP0DN37 164 aa15.88■□□□□ 0.13
SNX3-201ENST00000230085 EGR2P11161 476 aaPredicted RBP15.88■□□□□ 0.13
SNX3-201ENST00000230085 ODF1Q14990 250 aa15.88■□□□□ 0.13
SNX3-201ENST00000230085 OR11H6Q8NGC7 330 aa15.88■□□□□ 0.13
SNX3-201ENST00000230085 CFHR4Q92496 578 aa15.88■□□□□ 0.13
SNX3-201ENST00000230085 F8W735 103 aaPredicted RBP15.87■□□□□ 0.13
SNX3-201ENST00000230085 SAP30O75446 220 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 KLK9Q2XQG4 91 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 FANCD2OSQ96PS1 177 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 TM2D2Q9BX73 214 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 KLK9Q9UKQ9 250 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 TIMM8BQ9Y5J9 83 aaPredicted RBP15.87■□□□□ 0.13
SNX3-201ENST00000230085 SONP18583 2426 aaKnown RBP15.87■□□□□ 0.13
SNX3-201ENST00000230085 GNG7O60262 68 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 ATP5LO75964 103 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 CNIH1O95406 144 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 FABP2P12104 132 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 TPPP3Q9BW30 176 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 YAE1D1Q9NRH1 226 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 SPCS1Q9Y6A9 102 aa15.87■□□□□ 0.13
SNX3-201ENST00000230085 RBAKDNA6NC62 111 aa15.86■□□□□ 0.13
SNX3-201ENST00000230085 SCGB2A1O75556 95 aa15.86■□□□□ 0.13
SNX3-201ENST00000230085 SMIM13P0DJ93 91 aa15.86■□□□□ 0.13
SNX3-201ENST00000230085 TAL2Q16559 108 aa15.86■□□□□ 0.13
SNX3-201ENST00000230085 PCP2Q8IVA1 136 aa15.86■□□□□ 0.13
SNX3-201ENST00000230085 TTC9CQ8N5M4 171 aa15.86■□□□□ 0.13
SNX3-201ENST00000230085 ANK3Q12955 4377 aaKnown RBP15.86■□□□□ 0.13
SNX3-201ENST00000230085 TMEM238C9JI98 176 aa15.85■□□□□ 0.13
SNX3-201ENST00000230085 AVPP01185 164 aa15.85■□□□□ 0.13
SNX3-201ENST00000230085 GATA3P23771 443 aa15.85■□□□□ 0.13
SNX3-201ENST00000230085 ZNF562Q6V9R5 426 aa15.85■□□□□ 0.13
SNX3-201ENST00000230085 PHLDA1Q8WV24 401 aaPredicted RBP15.85■□□□□ 0.13
SNX3-201ENST00000230085 ONECUT1Q9UBC0 465 aa15.85■□□□□ 0.13
SNX3-201ENST00000230085 TIMM23O14925 209 aa15.84■□□□□ 0.13
SNX3-201ENST00000230085 IGHG4P01861 327 aa15.84■□□□□ 0.13
SNX3-201ENST00000230085 DKK2Q9UBU2 259 aa15.84■□□□□ 0.13
SNX3-201ENST00000230085 TEP1Q99973 2627 aaKnown RBP15.84■□□□□ 0.13
SNX3-201ENST00000230085 HIVEP2P31629 2446 aa15.84■□□□□ 0.13
SNX3-201ENST00000230085 LINC01619G3V211 115 aa15.83■□□□□ 0.12
SNX3-201ENST00000230085 SCGB1A1P11684 91 aa15.83■□□□□ 0.12
SNX3-201ENST00000230085 RAB9AP51151 201 aa15.83■□□□□ 0.12
SNX3-201ENST00000230085 TWIST1Q15672 202 aa15.83■□□□□ 0.12
SNX3-201ENST00000230085 C5orf64Q2M2E5 130 aa15.83■□□□□ 0.12
SNX3-201ENST00000230085 SAMD5Q5TGI4 173 aa15.83■□□□□ 0.12
SNX3-201ENST00000230085 DPM3Q9P2X0 92 aa15.83■□□□□ 0.12
SNX3-201ENST00000230085 FABP5P3A8MUU1 101 aa15.82■□□□□ 0.12
SNX3-201ENST00000230085 DLX1P56177 255 aa15.82■□□□□ 0.12
SNX3-201ENST00000230085 Q8N8P6 123 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms