RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 KRTAP27-1Q3LI81 207 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 MDP1Q86V88 176 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 IFI27L1Q96BM0 104 aa4.49□□□□□ -1.69
RFX4-201ENST00000229387 SPTAN1Q13813 2472 aaKnown RBP4.49□□□□□ -1.69
RFX4-201ENST00000229387 IGHV3OR15-7A0A075B7D8 119 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 EPM2AB3EWF7 344 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 J3QQQ9 107 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 WNT9BO14905 357 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 ENSAO43768 121 aaKnown RBP4.48□□□□□ -1.69
RFX4-201ENST00000229387 FCGR3BO75015 233 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 TCL1BO95988 128 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 DEFB109BQ30KR1 87 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 DEFB121Q5J5C9 76 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 PCSK4Q6UW60 755 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 Q71RC1 249 aaPredicted RBP4.48□□□□□ -1.69
RFX4-201ENST00000229387 C11orf53Q8IXP5 236 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 OR8A1Q8NGG7 326 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 HIST1H4GQ99525 98 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 C7orf69Q9H7B7 122 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 LSM4Q9Y4Z0 139 aaKnown RBP4.48□□□□□ -1.69
RFX4-201ENST00000229387 ZZEF1O43149 2961 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 ABCA1O95477 2261 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 A0A0A0MQY5 61 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 A0A0G2JNJ9 132 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 SLC25A20O43772 301 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 GYPEP15421 78 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 EDDM3BP56851 147 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 ZNF816Q0VGE8 651 aaPredicted RBP4.48□□□□□ -1.69
RFX4-201ENST00000229387 FOXF2Q12947 444 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 DAZAP2Q15038 168 aaPredicted RBP4.48□□□□□ -1.69
RFX4-201ENST00000229387 ZFP2Q6ZN57 461 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 EXOC3-AS1Q8N2X6 119 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 FGFRL1Q8N441 504 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 TMEM190Q8WZ59 177 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 Q9UFV3 132 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 ZNF318Q5VUA4 2279 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 ATRXP46100 2492 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 TRGV5A0A0B4J1U4 118 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 WI2-2373I1.2A0A1W2PRP0 233 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 DEFB108AA8MXU0 73 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 P0C879 139 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 FKBP2P26885 142 aaKnown RBP4.48□□□□□ -1.69
RFX4-201ENST00000229387 ZNF138P52744 262 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 PRSS22Q9GZN4 317 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 PKIGQ9Y2B9 76 aa4.48□□□□□ -1.69
RFX4-201ENST00000229387 TRGV11A0A075B6L2 103 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 FAM90A10PA6NDY2 464 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 IGKCP01834 107 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 HBDP02042 147 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 PRDX2P32119 198 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 PFN2P35080 140 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 NBL1P41271 181 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 CXCL5P42830 114 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 PCBD1P61457 104 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 FAM19A4Q96LR4 140 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 MRPL20Q9BYC9 149 aaKnown RBP4.47□□□□□ -1.69
RFX4-201ENST00000229387 AGPAT4-IT1Q9H0P7 198 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 ANKRD11Q6UB99 2663 aaPredicted RBP4.47□□□□□ -1.69
RFX4-201ENST00000229387 IGHV3-43A0A0B4J1X8 118 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 IGKV1-6A0A0C4DH72 117 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 F8W735 103 aaPredicted RBP4.47□□□□□ -1.69
RFX4-201ENST00000229387 IGHV3-43DP0DP04 118 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 COL8A2P25067 703 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 EFNA4P52798 201 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 FAM19A1Q7Z5A9 133 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 PRSS3P2Q8NHM4 247 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 MED13LQ71F56 2210 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 LINC01546A6NGU7 62 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 FOXL2NBQ6ZUU3 175 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 DCTN5Q9BTE1 182 aa4.47□□□□□ -1.69
RFX4-201ENST00000229387 IGF2RP11717 2491 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 AKAP6Q13023 2319 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 TRAV17A0A0B4J275 112 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 ACYP1P07311 99 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 FAM201AQ5SY85 155 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 MGST2Q99735 147 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 ZNF492Q9P255 531 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 U3KQK5 164 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 COL6A6A6NMZ7 2263 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 LOC107984156A0A0G2JMH3 177 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 FAM236DA0A1B0GTK5 79 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 TMEM89A2RUT3 159 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 LINC01549A6NIU2 74 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 SRRM4A7MD48 611 aaKnown RBP4.46□□□□□ -1.7
RFX4-201ENST00000229387 NDUFC2-KCTD14E9PQ53 114 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 GFRA3O60609 400 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 FAM236CP0DP71 79 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 LOXL3P58215 753 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 HIST1H4AP62805 103 aaKnown RBP4.46□□□□□ -1.7
RFX4-201ENST00000229387 TMEM170BQ5T4T1 132 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 WDR86Q86TI4 376 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 ARL17AQ8IVW1 177 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 SHANK2-AS3Q9BTD1 123 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 RPP21Q9H633 154 aaKnown RBP4.46□□□□□ -1.7
RFX4-201ENST00000229387 DKK2Q9UBU2 259 aa4.46□□□□□ -1.7
RFX4-201ENST00000229387 K7EMI3 77 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 IGHV1-2P23083 117 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 FGF12P61328 243 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 DRAM1Q8N682 238 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms