RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TRAV26-1A0A087WT03 109 aa10.77□□□□□ -0.69
PHGDH-233ENST00000642021 HIST1H1AQ02539 215 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-233ENST00000642021 CTSGP08311 255 aa10.77□□□□□ -0.69
PHGDH-233ENST00000642021 PAX8Q06710 450 aa10.77□□□□□ -0.69
PHGDH-233ENST00000642021 AMMECR1LQ6DCA0 310 aa10.77□□□□□ -0.69
PHGDH-233ENST00000642021 ORMDL3Q8N138 153 aa10.77□□□□□ -0.69
PHGDH-233ENST00000642021 TTC9CQ8N5M4 171 aa10.77□□□□□ -0.69
PHGDH-233ENST00000642021 MSRB1Q9NZV6 116 aa10.77□□□□□ -0.69
PHGDH-233ENST00000642021 FGF6P10767 208 aa10.76□□□□□ -0.69
PHGDH-233ENST00000642021 PRTN3P24158 256 aa10.76□□□□□ -0.69
PHGDH-233ENST00000642021 GAS8-AS1O95177 125 aa10.76□□□□□ -0.69
PHGDH-233ENST00000642021 CEACAM3P40198 252 aa10.76□□□□□ -0.69
PHGDH-233ENST00000642021 TMEM190Q8WZ59 177 aa10.76□□□□□ -0.69
PHGDH-233ENST00000642021 NPYP01303 97 aa10.75□□□□□ -0.69
PHGDH-233ENST00000642021 TRAV8-6A0A0B4J262 113 aa10.75□□□□□ -0.69
PHGDH-233ENST00000642021 CACNG7P62955 275 aa10.75□□□□□ -0.69
PHGDH-233ENST00000642021 PSG9Q00887 426 aa10.75□□□□□ -0.69
PHGDH-233ENST00000642021 TWIST1Q15672 202 aa10.75□□□□□ -0.69
PHGDH-233ENST00000642021 COX8CQ7Z4L0 72 aa10.75□□□□□ -0.69
PHGDH-233ENST00000642021 CD5LO43866 347 aa10.74□□□□□ -0.69
PHGDH-233ENST00000642021 RPL7P18124 248 aaKnown RBP10.74□□□□□ -0.69
PHGDH-233ENST00000642021 WFDC3Q8IUB2 231 aa10.74□□□□□ -0.69
PHGDH-233ENST00000642021 PSMG3-AS1Q96PY0 264 aa10.74□□□□□ -0.69
PHGDH-233ENST00000642021 PRAC2D3DTV9 90 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 K7ENP7 123 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 CKS2P33552 79 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 ERCC8Q13216 396 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 VMO1Q7Z5L0 202 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 Q8N6K4 173 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 FER1L6-AS1Q8NA97 138 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 ATRXP46100 2492 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 IGHV7-81A0A0B4J1V7 117 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 M0R1W7 72 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 IGLC6P0CF74 106 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 PF4V1P10720 104 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 FOXC1Q12948 553 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 RABAC1Q9UI14 185 aa10.73□□□□□ -0.69
PHGDH-233ENST00000642021 ATP6V0BQ99437 205 aa10.72□□□□□ -0.69
PHGDH-233ENST00000642021 CCL21O00585 134 aa10.72□□□□□ -0.69
PHGDH-233ENST00000642021 ZFP36P26651 326 aaKnown RBP10.72□□□□□ -0.69
PHGDH-233ENST00000642021 RAB9AP51151 201 aa10.72□□□□□ -0.69
PHGDH-233ENST00000642021 LGALS9BQ3B8N2 356 aa10.72□□□□□ -0.69
PHGDH-233ENST00000642021 TMEM97Q5BJF2 176 aa10.72□□□□□ -0.69
PHGDH-233ENST00000642021 LGALS9CQ6DKI2 356 aa10.72□□□□□ -0.69
PHGDH-233ENST00000642021 TIMD4Q96H15 378 aa10.72□□□□□ -0.69
PHGDH-233ENST00000642021 SAP30O75446 220 aa10.71□□□□□ -0.69
PHGDH-233ENST00000642021 HBDP02042 147 aa10.71□□□□□ -0.69
PHGDH-233ENST00000642021 ORM1P02763 201 aa10.71□□□□□ -0.69
PHGDH-233ENST00000642021 PPIFP30405 207 aaKnown RBP10.71□□□□□ -0.69
PHGDH-233ENST00000642021 UQCRFS1P47985 274 aa10.71□□□□□ -0.69
PHGDH-233ENST00000642021 RPS20P60866 119 aaKnown RBP10.71□□□□□ -0.69
PHGDH-233ENST00000642021 FBXL19-AS1Q494R0 122 aa10.71□□□□□ -0.69
PHGDH-233ENST00000642021 RNF185Q96GF1 192 aa10.71□□□□□ -0.69
PHGDH-233ENST00000642021 THYN1Q9P016 225 aa10.71□□□□□ -0.69
PHGDH-233ENST00000642021 C7orf71A4D174 169 aa10.71□□□□□ -0.7
PHGDH-233ENST00000642021 NDUFS7O75251 213 aa10.71□□□□□ -0.7
PHGDH-233ENST00000642021 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.7
PHGDH-233ENST00000642021 RNF182Q8N6D2 247 aa10.71□□□□□ -0.7
PHGDH-233ENST00000642021 IFI27L1Q96BM0 104 aa10.71□□□□□ -0.7
PHGDH-233ENST00000642021 DKK2Q9UBU2 259 aa10.71□□□□□ -0.7
PHGDH-233ENST00000642021 MSRB2Q9Y3D2 182 aa10.71□□□□□ -0.7
PHGDH-233ENST00000642021 IGHV3-66A0A0C4DH42 116 aa10.7□□□□□ -0.7
PHGDH-233ENST00000642021 CLEC3BP05452 202 aa10.7□□□□□ -0.7
PHGDH-233ENST00000642021 SELENOKQ9Y6D0 94 aa10.7□□□□□ -0.7
PHGDH-233ENST00000642021 EBI3Q14213 229 aa10.7□□□□□ -0.7
PHGDH-233ENST00000642021 C11orf71Q6IPW1 123 aa10.7□□□□□ -0.7
PHGDH-233ENST00000642021 PCP2Q8IVA1 136 aa10.7□□□□□ -0.7
PHGDH-233ENST00000642021 Q8N9W7 124 aa10.7□□□□□ -0.7
PHGDH-233ENST00000642021 C18orf15Q96N68 181 aa10.7□□□□□ -0.7
PHGDH-233ENST00000642021 IGHV3OR16-13A0A075B7E8 117 aa10.69□□□□□ -0.7
PHGDH-233ENST00000642021 IGHV3-74A0A0B4J1X5 117 aa10.69□□□□□ -0.7
PHGDH-233ENST00000642021 GATA1P15976 413 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-233ENST00000642021 DPF1Q92782 380 aa10.69□□□□□ -0.7
PHGDH-233ENST00000642021 IGF2RP11717 2491 aa10.69□□□□□ -0.7
PHGDH-233ENST00000642021 ADORA2A-AS1P86434 159 aa10.69□□□□□ -0.7
PHGDH-233ENST00000642021 C15orf32Q32M92 178 aa10.69□□□□□ -0.7
PHGDH-233ENST00000642021 CCDC144NLQ6NUI1 221 aa10.69□□□□□ -0.7
PHGDH-233ENST00000642021 OR1N2Q8NGR9 330 aa10.68□□□□□ -0.7
PHGDH-233ENST00000642021 PGPEP1Q9NXJ5 209 aa10.68□□□□□ -0.7
PHGDH-233ENST00000642021 FABP5P3A8MUU1 101 aa10.68□□□□□ -0.7
PHGDH-233ENST00000642021 EVI2AP22794 236 aa10.68□□□□□ -0.7
PHGDH-233ENST00000642021 NBL1P41271 181 aa10.68□□□□□ -0.7
PHGDH-233ENST00000642021 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
PHGDH-233ENST00000642021 NAA38Q9BRA0 125 aaKnown RBP10.68□□□□□ -0.7
PHGDH-233ENST00000642021 HIF1ANQ9NWT6 349 aa10.68□□□□□ -0.7
PHGDH-233ENST00000642021 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
PHGDH-233ENST00000642021 LINC01548A6NM66 108 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 SMAD7O15105 426 aaKnown RBP10.67□□□□□ -0.7
PHGDH-233ENST00000642021 BUB3O43684 328 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 ECSCRQ19T08 205 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 C11orf21Q9P2W6 132 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 SPTBN1Q01082 2364 aaKnown RBP10.67□□□□□ -0.7
PHGDH-233ENST00000642021 A0A1W2PPR1 153 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 SEC11AP67812 179 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 Q6ZQT7 251 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 ZNF502Q8TBZ5 544 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 CNFNQ9BYD5 112 aa10.67□□□□□ -0.7
PHGDH-233ENST00000642021 VPS13CQ709C8 3753 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 IGHV3-49A0A0A0MS15 119 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms