RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 FAM208BQ5VWN6 2430 aa6.38□□□□□ -1.39
PNKP-231ENST00000640501 LGALS9O00182 355 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 ZNF324O75467 553 aaPredicted RBP6.37□□□□□ -1.39
PNKP-231ENST00000640501 APOHP02749 345 aaPredicted RBP6.37□□□□□ -1.39
PNKP-231ENST00000640501 SNRPD3P62318 126 aaKnown RBP6.37□□□□□ -1.39
PNKP-231ENST00000640501 KIAA1644Q3SXP7 199 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 LINC01559Q495D7 138 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 ZNF493Q6ZR52 646 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 IL17RELQ6ZVW7 336 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 REC114Q7Z4M0 266 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 MAPK1IP1LQ8NDC0 245 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 C18orf32Q8TCD1 76 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 FOXC2Q99958 501 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 VGLL1Q99990 258 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 ALKBH7Q9BT30 221 aaPredicted RBP6.37□□□□□ -1.39
PNKP-231ENST00000640501 KLK15Q9H2R5 256 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 GSN-AS1Q9NRJ2 163 aa6.37□□□□□ -1.39
PNKP-231ENST00000640501 PRRC2AP48634 2157 aaKnown RBP6.37□□□□□ -1.39
PNKP-231ENST00000640501 ZFYVE26Q68DK2 2539 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 IGHV3OR16-13A0A075B7E8 117 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 IGHV3-49A0A0A0MS15 119 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 IGHV3-74A0A0B4J1X5 117 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 ZNF705FA8MVS1 300 aaPredicted RBP6.36□□□□□ -1.39
PNKP-231ENST00000640501 PPBPP02775 128 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 OR5AL1P0C617 328 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 ARMS2P0C7Q2 107 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 GZMBP10144 247 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 CTRLP40313 264 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 CRIP1P50238 77 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 CACNG7P62955 275 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 LYZL1Q6UWQ5 148 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 UNQ9165/PRO28630Q6UXU0 137 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 Q8N2B8 174 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 RNF182Q8N6D2 247 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 RNF152Q8N8N0 203 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 Q8TAT8 98 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 NAGKQ9UJ70 344 aa6.36□□□□□ -1.39
PNKP-231ENST00000640501 CR1P17927 2039 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 TMSB15BA0A087X1C1 80 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 TRAV8-2A0A0B4J237 113 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 TRAV21A0A0B4J279 112 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 C20orf202A1L168 122 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 M0R2Z0 102 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 TRBV12-3P01733 135 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 ZNF705DP0CH99 300 aaPredicted RBP6.35□□□□□ -1.39
PNKP-231ENST00000640501 ZNF705BP0CI00 300 aaPredicted RBP6.35□□□□□ -1.39
PNKP-231ENST00000640501 TWIST1Q15672 202 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 TM4SF20Q53R12 229 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 RNASEKQ6P5S7 137 aaKnown RBP6.35□□□□□ -1.39
PNKP-231ENST00000640501 WFDC12Q8WWY7 111 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 DPF1Q92782 380 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 SSBP4Q9BWG4 385 aaPredicted RBP6.35□□□□□ -1.39
PNKP-231ENST00000640501 AGPAT4-IT1Q9H0P7 198 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 ZNF702PQ9H963 129 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 PEMTQ9UBM1 199 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 LAMTOR2Q9Y2Q5 125 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 ABCA1O95477 2261 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 EPG5Q9HCE0 2579 aa6.35□□□□□ -1.39
PNKP-231ENST00000640501 MED13LQ71F56 2210 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 SPG11Q96JI7 2443 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 RPLP1P05386 114 aaKnown RBP6.34□□□□□ -1.39
PNKP-231ENST00000640501 FRMD6-AS1P0C7T7 363 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 LINC00614P0C842 121 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 IGLC6P0CF74 106 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 NTF3P20783 257 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 HLA-DMBP28068 263 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 ERCC8Q13216 396 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 PMCHL1Q16048 86 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 IGFL4Q6B9Z1 124 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 Q6ZS46 218 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 FA2HQ7L5A8 372 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 ORMDL3Q8N138 153 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 PRSS3P2Q8NHM4 247 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 MYOZ3Q8TDC0 251 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 CNFNQ9BYD5 112 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 TMEM191AQ9H0A3 160 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 TP53TG3Q9ULZ0 132 aa6.34□□□□□ -1.39
PNKP-231ENST00000640501 UTP20O75691 2785 aaKnown RBP6.34□□□□□ -1.4
PNKP-231ENST00000640501 COL12A1Q99715 3063 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 PRAC2D3DTV9 90 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 SOCS3O14543 225 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 SMAD7O15105 426 aaKnown RBP6.33□□□□□ -1.4
PNKP-231ENST00000640501 CD5LO43866 347 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 DUSP14O95147 198 aaKnown RBP6.33□□□□□ -1.4
PNKP-231ENST00000640501 MED14OSP0DP75 135 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 TSPOP30536 169 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 LEPP41159 167 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 KRTDAPP60985 99 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 DEFA6Q01524 100 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 TMEM95Q3KNT9 176 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 FAM104BQ5XKR9 115 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 EBLN2Q6P2I7 272 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 NIT1Q86X76 327 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 KLHDC1Q8N7A1 406 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 OR8A1Q8NGG7 326 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 ODF3Q96PU9 254 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 JMJD8Q96S16 334 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 VAMP8Q9BV40 100 aa6.33□□□□□ -1.4
PNKP-231ENST00000640501 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms