RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 FXYD5Q96DB9 178 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 FAM19A4Q96LR4 140 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 ATG101Q9BSB4 218 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 MARVELD1Q9BSK0 173 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 WFDC1Q9HC57 220 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 GSN-AS1Q9NRJ2 163 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 TP53TG3Q9ULZ0 132 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 LINC00588Q9Y4M8 146 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 KIAA1109Q2LD37 5005 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 C7orf71A4D174 169 aa11.41□□□□□ -0.58
COLCA2-207ENST00000639470 RLN2P04090 185 aa11.41□□□□□ -0.58
COLCA2-207ENST00000639470 RNASE4P34096 147 aaKnown RBP11.41□□□□□ -0.58
COLCA2-207ENST00000639470 ZNF493Q6ZR52 646 aa11.41□□□□□ -0.58
COLCA2-207ENST00000639470 ODF3Q96PU9 254 aa11.41□□□□□ -0.58
COLCA2-207ENST00000639470 SLC25A31Q9H0C2 315 aa11.41□□□□□ -0.58
COLCA2-207ENST00000639470 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
COLCA2-207ENST00000639470 TRAV26-1A0A087WT03 109 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 SSNA1O43805 119 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 PRAF2O60831 178 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 MPDU1O75352 247 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 ZNF324O75467 553 aaPredicted RBP11.4□□□□□ -0.58
COLCA2-207ENST00000639470 NBEAP1P0C6P0 100 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 ZNF575Q86XF7 245 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 ZFAND2AQ8N6M9 145 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 MRPL53Q96EL3 112 aaKnown RBP11.4□□□□□ -0.58
COLCA2-207ENST00000639470 C20orf144Q9BQM9 153 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 OR51M1Q9H341 326 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 MBD2Q9UBB5 411 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 KLF12Q9Y4X4 402 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 HSPB11Q9Y547 144 aa11.4□□□□□ -0.58
COLCA2-207ENST00000639470 KLLNB2CW77 178 aa11.39□□□□□ -0.59
COLCA2-207ENST00000639470 MPC2O95563 127 aa11.39□□□□□ -0.59
COLCA2-207ENST00000639470 CCDC28AQ8IWP9 274 aa11.39□□□□□ -0.59
COLCA2-207ENST00000639470 ATP5SQ99766 215 aa11.39□□□□□ -0.59
COLCA2-207ENST00000639470 PAXXQ9BUH6 204 aa11.39□□□□□ -0.59
COLCA2-207ENST00000639470 DNAH17Q9UFH2 4485 aa11.39□□□□□ -0.59
COLCA2-207ENST00000639470 SNURFLB1AK76 121 aa11.38□□□□□ -0.59
COLCA2-207ENST00000639470 SLC25A5P05141 298 aaKnown RBP11.38□□□□□ -0.59
COLCA2-207ENST00000639470 PDE6HQ13956 83 aa11.38□□□□□ -0.59
COLCA2-207ENST00000639470 FFAR4Q5NUL3 377 aa11.38□□□□□ -0.59
COLCA2-207ENST00000639470 KRTAP1-5Q9BYS1 174 aa11.38□□□□□ -0.59
COLCA2-207ENST00000639470 FUT9Q9Y231 359 aa11.38□□□□□ -0.59
COLCA2-207ENST00000639470 OR7C2O60412 319 aa11.37□□□□□ -0.59
COLCA2-207ENST00000639470 TNP2Q05952 138 aa11.37□□□□□ -0.59
COLCA2-207ENST00000639470 C1orf134Q5TEV5 83 aa11.37□□□□□ -0.59
COLCA2-207ENST00000639470 C9orf47Q6ZRZ4 202 aa11.37□□□□□ -0.59
COLCA2-207ENST00000639470 SSX7Q7RTT5 188 aa11.37□□□□□ -0.59
COLCA2-207ENST00000639470 PYGO2Q9BRQ0 406 aa11.37□□□□□ -0.59
COLCA2-207ENST00000639470 AAMDCQ9H7C9 122 aa11.37□□□□□ -0.59
COLCA2-207ENST00000639470 PRELID1Q9Y255 219 aa11.37□□□□□ -0.59
COLCA2-207ENST00000639470 NBDYA0A0U1RRE5 68 aa11.36□□□□□ -0.59
COLCA2-207ENST00000639470 IGHV3-53P01767 116 aa11.36□□□□□ -0.59
COLCA2-207ENST00000639470 RPL12P30050 165 aaKnown RBP11.36□□□□□ -0.59
COLCA2-207ENST00000639470 RANP62826 216 aaKnown RBP11.36□□□□□ -0.59
COLCA2-207ENST00000639470 CYCSP99999 105 aaKnown RBP11.36□□□□□ -0.59
COLCA2-207ENST00000639470 GNPNAT1Q96EK6 184 aaPredicted RBP11.36□□□□□ -0.59
COLCA2-207ENST00000639470 LINC00477Q96M19 166 aa11.36□□□□□ -0.59
COLCA2-207ENST00000639470 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
COLCA2-207ENST00000639470 TRGV1A0A0A0MS02 117 aa11.35□□□□□ -0.59
COLCA2-207ENST00000639470 HMGB3O15347 200 aaKnown RBP11.35□□□□□ -0.59
COLCA2-207ENST00000639470 GPX1P07203 203 aa11.35□□□□□ -0.59
COLCA2-207ENST00000639470 CRISP2P16562 243 aa11.35□□□□□ -0.59
COLCA2-207ENST00000639470 M6PRP20645 277 aa11.35□□□□□ -0.59
COLCA2-207ENST00000639470 UBE2L3P68036 154 aaKnown RBP11.35□□□□□ -0.59
COLCA2-207ENST00000639470 DAZ2Q13117 558 aaKnown RBP11.35□□□□□ -0.59
COLCA2-207ENST00000639470 VSIG2Q96IQ7 327 aa11.35□□□□□ -0.59
COLCA2-207ENST00000639470 MRPL32Q9BYC8 188 aaKnown RBP11.35□□□□□ -0.59
COLCA2-207ENST00000639470 Q9H3A6 140 aa11.35□□□□□ -0.59
COLCA2-207ENST00000639470 ZNF492Q9P255 531 aa11.35□□□□□ -0.59
COLCA2-207ENST00000639470 ALG5Q9Y673 324 aa11.35□□□□□ -0.59
COLCA2-207ENST00000639470 RAB2AP61019 212 aa11.34□□□□□ -0.59
COLCA2-207ENST00000639470 ESRGQ1W209 222 aa11.34□□□□□ -0.59
COLCA2-207ENST00000639470 MUC21Q5SSG8 566 aa11.34□□□□□ -0.59
COLCA2-207ENST00000639470 TMEM78Q5T7P6 136 aa11.34□□□□□ -0.59
COLCA2-207ENST00000639470 EIF4E3Q8N5X7 224 aaKnown RBP11.34□□□□□ -0.59
COLCA2-207ENST00000639470 RXFP4Q8TDU9 374 aa11.34□□□□□ -0.59
COLCA2-207ENST00000639470 CCL18P55774 89 aa11.33□□□□□ -0.6
COLCA2-207ENST00000639470 DEFA1P59665 94 aa11.33□□□□□ -0.6
COLCA2-207ENST00000639470 DEFA3P59666 94 aa11.33□□□□□ -0.6
COLCA2-207ENST00000639470 HYLS1Q96M11 299 aa11.33□□□□□ -0.6
COLCA2-207ENST00000639470 RPH3ALQ9UNE2 315 aa11.33□□□□□ -0.6
COLCA2-207ENST00000639470 PKHD1P08F94 4074 aa11.33□□□□□ -0.6
COLCA2-207ENST00000639470 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
COLCA2-207ENST00000639470 C17orf112F2Z3M2 114 aa11.32□□□□□ -0.6
COLCA2-207ENST00000639470 ZNF138P52744 262 aa11.32□□□□□ -0.6
COLCA2-207ENST00000639470 TCL1AP56279 114 aa11.32□□□□□ -0.6
COLCA2-207ENST00000639470 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
COLCA2-207ENST00000639470 Q5BKY6 102 aa11.32□□□□□ -0.6
COLCA2-207ENST00000639470 IGHV1OR15-1A0A075B7D0 117 aa11.31□□□□□ -0.6
COLCA2-207ENST00000639470 A0A096LPF7 62 aa11.31□□□□□ -0.6
COLCA2-207ENST00000639470 RGS13O14921 159 aa11.31□□□□□ -0.6
COLCA2-207ENST00000639470 SPINK4O60575 86 aa11.31□□□□□ -0.6
COLCA2-207ENST00000639470 IFNA5P01569 189 aa11.31□□□□□ -0.6
COLCA2-207ENST00000639470 FAM3BP58499 235 aaPredicted RBP11.31□□□□□ -0.6
COLCA2-207ENST00000639470 SCGB1C1Q8TD33 95 aa11.31□□□□□ -0.6
COLCA2-207ENST00000639470 LINC00467Q9BRT7 94 aa11.31□□□□□ -0.6
COLCA2-207ENST00000639470 KCNIP2Q9NS61 270 aa11.31□□□□□ -0.6
COLCA2-207ENST00000639470 MDFICQ9P1T7 246 aa11.31□□□□□ -0.6
COLCA2-207ENST00000639470 PKD1P98161 4303 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms