RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 MAXP61244 160 aa1.45□□□□□ -2.18
CCDC7-212ENST00000639041 CITO14578 2027 aa1.45□□□□□ -2.18
CCDC7-212ENST00000639041 DLC1Q96QB1 1528 aa1.45□□□□□ -2.18
CCDC7-212ENST00000639041 PRB4P10163 310 aaPredicted RBP1.44□□□□□ -2.18
CCDC7-212ENST00000639041 POLR2HP52434 150 aaKnown RBP1.44□□□□□ -2.18
CCDC7-212ENST00000639041 MED12Q93074 2177 aa1.43□□□□□ -2.18
CCDC7-212ENST00000639041 TRAV13-1A0A0B4J241 112 aa1.43□□□□□ -2.18
CCDC7-212ENST00000639041 FAM107AO95990 144 aa1.43□□□□□ -2.18
CCDC7-212ENST00000639041 LINC00299Q6ZSB3 139 aa1.43□□□□□ -2.18
CCDC7-212ENST00000639041 SMIM15Q7Z3B0 74 aa1.43□□□□□ -2.18
CCDC7-212ENST00000639041 LXNQ9BS40 222 aa1.43□□□□□ -2.18
CCDC7-212ENST00000639041 FBN2P35556 2912 aa1.43□□□□□ -2.18
CCDC7-212ENST00000639041 TCOF1Q13428 1488 aaKnown RBP1.43□□□□□ -2.18
CCDC7-212ENST00000639041 NOTCH1P46531 2555 aa1.42□□□□□ -2.18
CCDC7-212ENST00000639041 ZCCHC11Q5TAX3 1644 aaKnown RBP1.42□□□□□ -2.18
CCDC7-212ENST00000639041 LOC107984156A0A0G2JMH3 177 aa1.42□□□□□ -2.18
CCDC7-212ENST00000639041 TFAMQ00059 246 aaKnown RBP1.42□□□□□ -2.18
CCDC7-212ENST00000639041 SAMD13Q5VXD3 122 aa1.42□□□□□ -2.18
CCDC7-212ENST00000639041 ARL17AQ8IVW1 177 aa1.42□□□□□ -2.18
CCDC7-212ENST00000639041 BOKQ9UMX3 212 aaPredicted RBP1.42□□□□□ -2.18
CCDC7-212ENST00000639041 FANCMQ8IYD8 2048 aa1.42□□□□□ -2.18
CCDC7-212ENST00000639041 TRBV27A0A0K0K1C4 114 aa1.41□□□□□ -2.18
CCDC7-212ENST00000639041 TMEM128Q5BJH2 165 aa1.41□□□□□ -2.18
CCDC7-212ENST00000639041 Q86TA4 180 aa1.41□□□□□ -2.18
CCDC7-212ENST00000639041 BCL9O00512 1426 aa1.4□□□□□ -2.18
CCDC7-212ENST00000639041 ASCC3Q8N3C0 2202 aaKnown RBP1.4□□□□□ -2.18
CCDC7-212ENST00000639041 H3BMG7 143 aa1.4□□□□□ -2.19
CCDC7-212ENST00000639041 M0QZK8 103 aa1.4□□□□□ -2.19
CCDC7-212ENST00000639041 S100GP29377 79 aa1.4□□□□□ -2.19
CCDC7-212ENST00000639041 RPL37AP61513 92 aaKnown RBP1.4□□□□□ -2.19
CCDC7-212ENST00000639041 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.4□□□□□ -2.19
CCDC7-212ENST00000639041 PTPRDP23468 1912 aa1.4□□□□□ -2.19
CCDC7-212ENST00000639041 LOC107984640A0A0U1RRK4 108 aa1.39□□□□□ -2.19
CCDC7-212ENST00000639041 ZNF727A8MUV8 499 aa1.39□□□□□ -2.19
CCDC7-212ENST00000639041 FOXA3P55318 350 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-212ENST00000639041 CCDC115Q96NT0 180 aa1.39□□□□□ -2.19
CCDC7-212ENST00000639041 NABP2Q9BQ15 211 aa1.39□□□□□ -2.19
CCDC7-212ENST00000639041 ZNF469Q96JG9 3925 aaPredicted RBP1.38□□□□□ -2.19
CCDC7-212ENST00000639041 TRBV30A0A0K0K1B3 111 aa1.38□□□□□ -2.19
CCDC7-212ENST00000639041 SAA1P0DJI8 122 aaPredicted RBP1.38□□□□□ -2.19
CCDC7-212ENST00000639041 CRYGSP22914 178 aa1.38□□□□□ -2.19
CCDC7-212ENST00000639041 C5orf17Q8NAS9 161 aa1.38□□□□□ -2.19
CCDC7-212ENST00000639041 MORN4Q8NDC4 146 aa1.38□□□□□ -2.19
CCDC7-212ENST00000639041 BRK1Q8WUW1 75 aa1.38□□□□□ -2.19
CCDC7-212ENST00000639041 LPAR5Q9H1C0 372 aa1.38□□□□□ -2.19
CCDC7-212ENST00000639041 CBLN4Q9NTU7 201 aa1.38□□□□□ -2.19
CCDC7-212ENST00000639041 A0A0J9YY99 117 aa1.37□□□□□ -2.19
CCDC7-212ENST00000639041 RPS3P23396 243 aaKnown RBP eCLIP1.37□□□□□ -2.19
CCDC7-212ENST00000639041 CIB3Q96Q77 187 aaPredicted RBP1.37□□□□□ -2.19
CCDC7-212ENST00000639041 FAM135BQ49AJ0 1406 aa1.37□□□□□ -2.19
CCDC7-212ENST00000639041 TRBV7-6A0A0J9YX20 115 aa1.36□□□□□ -2.19
CCDC7-212ENST00000639041 H0YJX3 145 aa1.36□□□□□ -2.19
CCDC7-212ENST00000639041 PDE6GP18545 87 aa1.36□□□□□ -2.19
CCDC7-212ENST00000639041 Q6ZQY7 126 aa1.36□□□□□ -2.19
CCDC7-212ENST00000639041 OR51A4Q8NGJ6 313 aa1.36□□□□□ -2.19
CCDC7-212ENST00000639041 OR9Q1Q8NGQ5 310 aa1.36□□□□□ -2.19
CCDC7-212ENST00000639041 AP1S3Q96PC3 154 aa1.36□□□□□ -2.19
CCDC7-212ENST00000639041 DDA1Q9BW61 102 aa1.36□□□□□ -2.19
CCDC7-212ENST00000639041 NDUFAF1Q9Y375 327 aa1.36□□□□□ -2.19
CCDC7-212ENST00000639041 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.35□□□□□ -2.19
CCDC7-212ENST00000639041 LOC107986453A0A1B0GWG9 222 aa1.35□□□□□ -2.19
CCDC7-212ENST00000639041 TOMM20LQ6UXN7 152 aa1.35□□□□□ -2.19
CCDC7-212ENST00000639041 TMEM35BQ8NCS4 154 aa1.35□□□□□ -2.19
CCDC7-212ENST00000639041 MRPL40Q9NQ50 206 aaKnown RBP1.35□□□□□ -2.19
CCDC7-212ENST00000639041 FGD6Q6ZV73 1430 aa1.34□□□□□ -2.19
CCDC7-212ENST00000639041 USP54Q70EL1 1684 aa1.34□□□□□ -2.19
CCDC7-212ENST00000639041 ZGRF1Q86YA3 2104 aa1.34□□□□□ -2.2
CCDC7-212ENST00000639041 ZFC3H1O60293 1989 aaKnown RBP1.34□□□□□ -2.2
CCDC7-212ENST00000639041 A2MP01023 1474 aa1.33□□□□□ -2.2
CCDC7-212ENST00000639041 BBIP1A8MTZ0 92 aa1.33□□□□□ -2.2
CCDC7-212ENST00000639041 SLC25A4P12235 298 aa1.33□□□□□ -2.2
CCDC7-212ENST00000639041 CSAG1Q6PB30 78 aa1.33□□□□□ -2.2
CCDC7-212ENST00000639041 CCL19Q99731 98 aa1.33□□□□□ -2.2
CCDC7-212ENST00000639041 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
CCDC7-212ENST00000639041 HMCN1Q96RW7 5635 aa1.33□□□□□ -2.2
CCDC7-212ENST00000639041 PRORSD1PA6NEY8 169 aa1.32□□□□□ -2.2
CCDC7-212ENST00000639041 SULT1C4O75897 302 aa1.32□□□□□ -2.2
CCDC7-212ENST00000639041 SRP9P49458 86 aaKnown RBP1.32□□□□□ -2.2
CCDC7-212ENST00000639041 BLCAPP62952 87 aa1.32□□□□□ -2.2
CCDC7-212ENST00000639041 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
CCDC7-212ENST00000639041 ARL5CA6NH57 179 aa1.31□□□□□ -2.2
CCDC7-212ENST00000639041 TSTD3H0UI37 97 aa1.31□□□□□ -2.2
CCDC7-212ENST00000639041 TMEM229BQ8NBD8 167 aa1.31□□□□□ -2.2
CCDC7-212ENST00000639041 GNG14A0A1W2PPG7 69 aa1.3□□□□□ -2.2
CCDC7-212ENST00000639041 K7EIL1 84 aa1.3□□□□□ -2.2
CCDC7-212ENST00000639041 EDF1O60869 148 aaKnown RBP1.3□□□□□ -2.2
CCDC7-212ENST00000639041 SPINT3P49223 89 aa1.3□□□□□ -2.2
CCDC7-212ENST00000639041 B2MP61769 119 aa1.3□□□□□ -2.2
CCDC7-212ENST00000639041 SNRPD3P62318 126 aaKnown RBP1.3□□□□□ -2.2
CCDC7-212ENST00000639041 QRFPP83859 136 aa1.3□□□□□ -2.2
CCDC7-212ENST00000639041 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
CCDC7-212ENST00000639041 IZUMO2Q6UXV1 221 aa1.3□□□□□ -2.2
CCDC7-212ENST00000639041 C3orf62Q6ZUJ4 267 aa1.3□□□□□ -2.2
CCDC7-212ENST00000639041 TCTEX1D1Q8N7M0 179 aa1.3□□□□□ -2.2
CCDC7-212ENST00000639041 SPINK9Q5DT21 86 aa1.29□□□□□ -2.2
CCDC7-212ENST00000639041 MPC1Q9Y5U8 109 aa1.29□□□□□ -2.2
CCDC7-212ENST00000639041 DSPPQ9NZW4 1301 aa1.29□□□□□ -2.2
CCDC7-212ENST00000639041 FER1L6Q2WGJ9 1857 aa1.29□□□□□ -2.2
CCDC7-212ENST00000639041 TANC2Q9HCD6 1990 aa1.28□□□□□ -2.2
CCDC7-212ENST00000639041 A0A1W2PPB8 328 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms