RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 GCHFRP30047 84 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 RAB5CP51148 216 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 ZNF138P52744 262 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 TAS2R60P59551 318 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 ZFP69Q49AA0 526 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 CASC10Q5T4H9 136 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 C9orf47Q6ZRZ4 202 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 Q8NAQ8 132 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 OR11H4Q8NGC9 324 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 NDFIP1Q9BT67 221 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 CYTL1Q9NRR1 136 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 LENEPQ9Y5L5 61 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 X6R8D5 127 aa5.66□□□□□ -1.5
NR1I3-235ENST00000628566 TRAV12-2A0A075B6T6 113 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 MAP1LC3B2A6NCE7 125 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 FBLL1A6NHQ2 334 aaKnown RBP5.65□□□□□ -1.5
NR1I3-235ENST00000628566 DIRC3C9JPN6 131 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 PRAC2D3DTV9 90 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 F6UZH7 168 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 DEFB4AO15263 64 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 GPX1P07203 203 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 CT45A10P0DMU9 189 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 PPT1P50897 306 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 PMS2P11Q13670 270 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 LGALSLQ3ZCW2 172 aaPredicted RBP5.65□□□□□ -1.5
NR1I3-235ENST00000628566 ZFAND6Q6FIF0 208 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 SLC51BQ86UW2 128 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 C5orf17Q8NAS9 161 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 TMED6Q8WW62 240 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 ZNF503Q96F45 646 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 PYGO2Q9BRQ0 406 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 MAP1LC3BQ9GZQ8 125 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 ZNF492Q9P255 531 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 RPH3ALQ9UNE2 315 aa5.65□□□□□ -1.5
NR1I3-235ENST00000628566 AGRNO00468 2067 aa5.65□□□□□ -1.51
NR1I3-235ENST00000628566 DNAH9Q9NYC9 4486 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 IGKV2-40A0A087WW87 121 aaPredicted RBP5.64□□□□□ -1.51
NR1I3-235ENST00000628566 A0A1W2PRE2 83 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 C7orf71A4D174 169 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 IFNA7P01567 189 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 IGKV2D-40P01614 121 aaPredicted RBP5.64□□□□□ -1.51
NR1I3-235ENST00000628566 HTN1P15515 57 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 EMP1P54849 157 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 ERCC8Q13216 396 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 GFI1BQ5VTD9 330 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 ZNF493Q6ZR52 646 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 C1orf158Q8N1D5 194 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 FAM213BQ8TBF2 198 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 SUN5Q8TC36 379 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 SFT2D1Q8WV19 159 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 C16orf74Q96GX8 76 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 TCEAL7Q9BRU2 100 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 AGPAT4-IT1Q9H0P7 198 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 ARL2-SNX15V9GYD0 113 aa5.64□□□□□ -1.51
NR1I3-235ENST00000628566 RYR3Q15413 4870 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 TRAV10A0A0B4J240 114 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 TRAV12-3A0A0B4J271 114 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 LYRM9A8MSI8 78 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 SNURFLB1AK76 121 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 J3KRW8 73 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 RGS13O14921 159 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 CRXO43186 299 aaPredicted RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 EIF3GO75821 320 aaKnown RBP eCLIP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 H2AFB1P0C5Y9 115 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 RBMY1A1P0DJD3 496 aaKnown RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 RBMY1CP0DJD4 496 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 CRISP2P16562 243 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 TCTAP57738 103 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 NANOS2P60321 138 aaKnown RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 SUMO1P63165 101 aaKnown RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 RBMY1FQ15415 496 aaKnown RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 CEMP1Q6PRD7 247 aaPredicted RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 GOLT1AQ6ZVE7 132 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 CYB561D1Q8N8Q1 229 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 ZNF680Q8NEM1 530 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 TMEM263Q8WUH6 116 aaKnown RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 PHLDA1Q8WV24 401 aaPredicted RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 VGLL1Q99990 258 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 ATG101Q9BSB4 218 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 YTHDF2Q9Y5A9 579 aaKnown RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 TIMM8BQ9Y5J9 83 aaPredicted RBP5.63□□□□□ -1.51
NR1I3-235ENST00000628566 STAB2Q8WWQ8 2551 aa5.63□□□□□ -1.51
NR1I3-235ENST00000628566 CBY3A6NI87 242 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 ZNF705GA8MUZ8 300 aaPredicted RBP5.62□□□□□ -1.51
NR1I3-235ENST00000628566 KLLNB2CW77 178 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 TCRAP04437 139 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 RNASE4P34096 147 aaKnown RBP5.62□□□□□ -1.51
NR1I3-235ENST00000628566 FHITP49789 147 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 FGF8P55075 233 aaPredicted RBP5.62□□□□□ -1.51
NR1I3-235ENST00000628566 UBE2G2P60604 165 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 DAD1P61803 113 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 ZNF726P1Q15940 193 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 SAPCD1Q5SSQ6 148 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 FAM222AQ5U5X8 452 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 C2CD4CQ8TF44 421 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 HIST1H2BAQ96A08 127 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 FAM19A4Q96LR4 140 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 DKK2Q9UBU2 259 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 EPDR1Q9UM22 224 aa5.62□□□□□ -1.51
NR1I3-235ENST00000628566 TENM3Q9P273 2699 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms