RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 SHISA9B4DS77 424 aa13.5□□□□□ -0.25
LHX3-203ENST00000619587 ZNF575Q86XF7 245 aa13.5□□□□□ -0.25
LHX3-203ENST00000619587 TRAV17A0A0B4J275 112 aa13.5□□□□□ -0.25
LHX3-203ENST00000619587 ZNF883P0CG24 379 aa13.5□□□□□ -0.25
LHX3-203ENST00000619587 TMEM8BA6NDV4 472 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 FCER1GP30273 86 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 C12orf74Q32Q52 190 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 IGFL4Q6B9Z1 124 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 C20orf78Q9BR46 151 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 CNOT1A5YKK6 2376 aaKnown RBP13.49□□□□□ -0.25
LHX3-203ENST00000619587 C17orf100A8MU93 164 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 TMEM178BH3BS89 294 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 TMEM155Q4W5P6 130 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 KLF17Q5JT82 389 aaPredicted RBP13.49□□□□□ -0.25
LHX3-203ENST00000619587 TMEM158Q8WZ71 300 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 AAMDCQ9H7C9 122 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 TMEM160Q9NX00 188 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 PRO0461Q9UI25 63 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 FAM215AQ9Y5M1 114 aa13.49□□□□□ -0.25
LHX3-203ENST00000619587 TRAV40A0A0B4J280 105 aa13.48□□□□□ -0.25
LHX3-203ENST00000619587 A0A1B0GWB2 263 aa13.48□□□□□ -0.25
LHX3-203ENST00000619587 VSTM5A8MXK1 200 aa13.48□□□□□ -0.25
LHX3-203ENST00000619587 IGLC6P0CF74 106 aa13.48□□□□□ -0.25
LHX3-203ENST00000619587 SRSF1Q07955 248 aaKnown RBP eCLIP13.48□□□□□ -0.25
LHX3-203ENST00000619587 PRR25Q96S07 402 aa13.48□□□□□ -0.25
LHX3-203ENST00000619587 IGHV1-3A0A0C4DH29 117 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 PRRG2O14669 202 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 TNFRSF6BO95407 300 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 CUL9Q8IWT3 2517 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 DPM2O94777 84 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 APOMO95445 188 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 PPIFP30405 207 aaKnown RBP13.47□□□□□ -0.25
LHX3-203ENST00000619587 PLGLAQ15195 96 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 TTC9CQ8N5M4 171 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 CEACAM4O75871 244 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 HLA-DMBP28068 263 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 ADIPOQQ15848 244 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 C8orf86Q6ZUL3 223 aa13.47□□□□□ -0.25
LHX3-203ENST00000619587 ZNF418Q8TF45 676 aaPredicted RBP13.47□□□□□ -0.25
LHX3-203ENST00000619587 MRPL35Q9NZE8 188 aaKnown RBP13.47□□□□□ -0.25
LHX3-203ENST00000619587 LCNL1Q6ZST4 164 aa13.46□□□□□ -0.25
LHX3-203ENST00000619587 TNFRSF13BO14836 293 aaPredicted RBP13.46□□□□□ -0.26
LHX3-203ENST00000619587 CNIH1O95406 144 aa13.46□□□□□ -0.26
LHX3-203ENST00000619587 RRN3P1Q2M238 152 aa13.46□□□□□ -0.26
LHX3-203ENST00000619587 C3orf36Q3SXR2 165 aa13.46□□□□□ -0.26
LHX3-203ENST00000619587 SYT8Q8NBV8 401 aa13.46□□□□□ -0.26
LHX3-203ENST00000619587 IGFBPL1Q8WX77 278 aa13.46□□□□□ -0.26
LHX3-203ENST00000619587 ORM1P02763 201 aa13.45□□□□□ -0.26
LHX3-203ENST00000619587 THBDP07204 575 aa13.45□□□□□ -0.26
LHX3-203ENST00000619587 SPINK8P0C7L1 97 aa13.45□□□□□ -0.26
LHX3-203ENST00000619587 LINC01546A6NGU7 62 aa13.45□□□□□ -0.26
LHX3-203ENST00000619587 CYSLTR1Q9Y271 337 aa13.45□□□□□ -0.26
LHX3-203ENST00000619587 CDX4O14627 284 aaPredicted RBP13.44□□□□□ -0.26
LHX3-203ENST00000619587 FOXI1Q12951 378 aa13.44□□□□□ -0.26
LHX3-203ENST00000619587 TAL2Q16559 108 aa13.44□□□□□ -0.26
LHX3-203ENST00000619587 HLA-DRB4P13762 266 aa13.44□□□□□ -0.26
LHX3-203ENST00000619587 COX7A1P24310 79 aa13.44□□□□□ -0.26
LHX3-203ENST00000619587 IGFL2Q6UWQ7 119 aa13.44□□□□□ -0.26
LHX3-203ENST00000619587 HIST1H4GQ99525 98 aa13.44□□□□□ -0.26
LHX3-203ENST00000619587 HLA-DRB4X5D2U9 266 aa13.44□□□□□ -0.26
LHX3-203ENST00000619587 IGLV1-47P01700 117 aa13.43□□□□□ -0.26
LHX3-203ENST00000619587 PDE6HQ13956 83 aa13.43□□□□□ -0.26
LHX3-203ENST00000619587 CDIP1Q9H305 208 aa13.43□□□□□ -0.26
LHX3-203ENST00000619587 NXT2Q9NPJ8 142 aaKnown RBP13.43□□□□□ -0.26
LHX3-203ENST00000619587 PSMG3-AS1Q96PY0 264 aa13.43□□□□□ -0.26
LHX3-203ENST00000619587 GFRALQ6UXV0 394 aa13.42□□□□□ -0.26
LHX3-203ENST00000619587 ARHGAP32A7KAX9 2087 aa13.42□□□□□ -0.26
LHX3-203ENST00000619587 BUB1B-PAK6H3BSN5 160 aa13.42□□□□□ -0.26
LHX3-203ENST00000619587 ATP5LO75964 103 aa13.42□□□□□ -0.26
LHX3-203ENST00000619587 KLRD1Q13241 179 aa13.42□□□□□ -0.26
LHX3-203ENST00000619587 NUP37Q8NFH4 326 aa13.42□□□□□ -0.26
LHX3-203ENST00000619587 C1QTNF4Q9BXJ3 329 aa13.42□□□□□ -0.26
LHX3-203ENST00000619587 ATMQ13315 3056 aa13.42□□□□□ -0.26
LHX3-203ENST00000619587 MT-ATP8P03928 68 aa13.41□□□□□ -0.26
LHX3-203ENST00000619587 COX8CQ7Z4L0 72 aa13.41□□□□□ -0.26
LHX3-203ENST00000619587 TMEM190Q8WZ59 177 aa13.41□□□□□ -0.26
LHX3-203ENST00000619587 NDUFA3O95167 84 aa13.41□□□□□ -0.26
LHX3-203ENST00000619587 IGHV3-23P01764 117 aa13.41□□□□□ -0.26
LHX3-203ENST00000619587 IGHG4P01861 327 aa13.41□□□□□ -0.26
LHX3-203ENST00000619587 DTX2Q86UW9 622 aa13.41□□□□□ -0.26
LHX3-203ENST00000619587 CACNA1BQ00975 2339 aa13.4□□□□□ -0.26
LHX3-203ENST00000619587 IGLV2-18A0A075B6J9 118 aa13.4□□□□□ -0.26
LHX3-203ENST00000619587 IGHV3OR16-8A0A075B7F1 116 aa13.4□□□□□ -0.26
LHX3-203ENST00000619587 TSPAN13O95857 204 aa13.4□□□□□ -0.26
LHX3-203ENST00000619587 TRGV3P03979 118 aa13.4□□□□□ -0.26
LHX3-203ENST00000619587 ERCC8Q13216 396 aa13.4□□□□□ -0.26
LHX3-203ENST00000619587 TRAV26-2A0A0B4J265 109 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 EFNA4P52798 201 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 Q8N8P6 123 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 RPEQ96AT9 228 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 DCHS2Q6V1P9 2916 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 BSPH1Q075Z2 132 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 C5orf64Q2M2E5 130 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 DEFB109BQ30KR1 87 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 LINC01559Q495D7 138 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 ATP6V0E2Q8NHE4 81 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 CNFNQ9BYD5 112 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 COLQQ9Y215 455 aaPredicted RBP13.39□□□□□ -0.27
LHX3-203ENST00000619587 GVINP1Q7Z2Y8 2422 aa13.39□□□□□ -0.27
LHX3-203ENST00000619587 TRBV7-3A0A075B6L6 115 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms