RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 PPIFP30405 207 aaKnown RBP11.79□□□□□ -0.52
SRRT-217ENST00000618411 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
SRRT-217ENST00000618411 DLX6P56179 175 aa11.79□□□□□ -0.52
SRRT-217ENST00000618411 CCL8P80075 99 aa11.79□□□□□ -0.52
SRRT-217ENST00000618411 C5orf64Q2M2E5 130 aa11.79□□□□□ -0.52
SRRT-217ENST00000618411 DLX4Q92988 240 aaPredicted RBP11.79□□□□□ -0.52
SRRT-217ENST00000618411 NDUFB3O43676 98 aa11.78□□□□□ -0.52
SRRT-217ENST00000618411 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
SRRT-217ENST00000618411 Q6ZUT4 128 aa11.78□□□□□ -0.52
SRRT-217ENST00000618411 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
SRRT-217ENST00000618411 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
SRRT-217ENST00000618411 VCX2Q9H322 139 aa11.77□□□□□ -0.52
SRRT-217ENST00000618411 COLQQ9Y215 455 aaPredicted RBP11.77□□□□□ -0.52
SRRT-217ENST00000618411 IGHV1-8P0DP01 117 aa11.77□□□□□ -0.53
SRRT-217ENST00000618411 GATA1P15976 413 aaPredicted RBP11.77□□□□□ -0.53
SRRT-217ENST00000618411 NFE4Q86UQ8 179 aa11.77□□□□□ -0.53
SRRT-217ENST00000618411 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.53
SRRT-217ENST00000618411 ERG28Q9UKR5 140 aa11.77□□□□□ -0.53
SRRT-217ENST00000618411 MYMXA0A1B0GTQ4 84 aa11.77□□□□□ -0.53
SRRT-217ENST00000618411 ORM1P02763 201 aa11.77□□□□□ -0.53
SRRT-217ENST00000618411 LAGE3Q14657 143 aa11.77□□□□□ -0.53
SRRT-217ENST00000618411 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
SRRT-217ENST00000618411 DTX2Q86UW9 622 aa11.77□□□□□ -0.53
SRRT-217ENST00000618411 PGPEP1Q9NXJ5 209 aa11.77□□□□□ -0.53
SRRT-217ENST00000618411 XGP55808 180 aa11.76□□□□□ -0.53
SRRT-217ENST00000618411 TMEM155Q4W5P6 130 aa11.76□□□□□ -0.53
SRRT-217ENST00000618411 FBXL15Q9H469 300 aa11.76□□□□□ -0.53
SRRT-217ENST00000618411 MBD3L4A6NDZ8 208 aaPredicted RBP11.76□□□□□ -0.53
SRRT-217ENST00000618411 MBD3L3A6NE82 208 aaPredicted RBP11.76□□□□□ -0.53
SRRT-217ENST00000618411 MBD3L5A6NJ08 208 aaPredicted RBP11.76□□□□□ -0.53
SRRT-217ENST00000618411 FABP5P3A8MUU1 101 aa11.76□□□□□ -0.53
SRRT-217ENST00000618411 MBD3L2Q8NHZ7 208 aaPredicted RBP11.76□□□□□ -0.53
SRRT-217ENST00000618411 NDUFA3O95167 84 aa11.75□□□□□ -0.53
SRRT-217ENST00000618411 LOXP28300 417 aaPredicted RBP11.75□□□□□ -0.53
SRRT-217ENST00000618411 SEM1Q6ZVN7 128 aa11.75□□□□□ -0.53
SRRT-217ENST00000618411 PPDPFLQ8WWR9 84 aa11.75□□□□□ -0.53
SRRT-217ENST00000618411 RAB1BQ9H0U4 201 aa11.75□□□□□ -0.53
SRRT-217ENST00000618411 MALRD1Q5VYJ5 2156 aa11.75□□□□□ -0.53
SRRT-217ENST00000618411 TNFRSF13BO14836 293 aaPredicted RBP11.75□□□□□ -0.53
SRRT-217ENST00000618411 Q8TAT8 98 aa11.75□□□□□ -0.53
SRRT-217ENST00000618411 TRAV12-1A0A0B4J245 112 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 A6NJY4 79 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 H7C1H1 209 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 ZNF883P0CG24 379 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 FHL3Q13643 280 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 LYPD2Q6UXB3 125 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 IGHV1-3A0A0C4DH29 117 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 F8VRH5 84 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 ASCL5Q7RTU5 278 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 RNF183Q96D59 192 aa11.74□□□□□ -0.53
SRRT-217ENST00000618411 C17orf100A8MU93 164 aa11.73□□□□□ -0.53
SRRT-217ENST00000618411 TMEM178BH3BS89 294 aa11.73□□□□□ -0.53
SRRT-217ENST00000618411 RPL7P18124 248 aaKnown RBP11.73□□□□□ -0.53
SRRT-217ENST00000618411 TEN1Q86WV5 123 aa11.73□□□□□ -0.53
SRRT-217ENST00000618411 IGLV1-47P01700 117 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 ZNF672Q499Z4 452 aaPredicted RBP11.72□□□□□ -0.53
SRRT-217ENST00000618411 LYRM7Q5U5X0 104 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 NUP37Q8NFH4 326 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 RNF5Q99942 180 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 TRAV17A0A0B4J275 112 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 CNIH1O95406 144 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 LGALS1P09382 135 aaKnown RBP11.72□□□□□ -0.53
SRRT-217ENST00000618411 UBE2D1P51668 147 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 NRACQ8N912 160 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 GLMPQ8WWB7 406 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 CTSZQ9UBR2 303 aa11.72□□□□□ -0.53
SRRT-217ENST00000618411 LINC01549A6NIU2 74 aa11.71□□□□□ -0.53
SRRT-217ENST00000618411 LAMTOR5O43504 91 aa11.71□□□□□ -0.53
SRRT-217ENST00000618411 PSMB2P49721 201 aa11.71□□□□□ -0.53
SRRT-217ENST00000618411 TDHQ8IZJ6 230 aa11.71□□□□□ -0.53
SRRT-217ENST00000618411 PRSS33Q8NF86 280 aa11.71□□□□□ -0.53
SRRT-217ENST00000618411 CARD19Q96LW7 228 aa11.71□□□□□ -0.53
SRRT-217ENST00000618411 UBE2D3P61077 147 aa11.71□□□□□ -0.54
SRRT-217ENST00000618411 UBE2D2P62837 147 aa11.71□□□□□ -0.54
SRRT-217ENST00000618411 IL17RELQ6ZVW7 336 aa11.71□□□□□ -0.54
SRRT-217ENST00000618411 IGHG4P01861 327 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 GFRALQ6UXV0 394 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 KAAG1Q9UBP8 84 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 LOC107984156A0A0G2JMH3 177 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 GATA3P23771 443 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 EFNA4P52798 201 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 ARL17AQ8IVW1 177 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 FDCSPQ8NFU4 85 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 ANAPC13Q9BS18 74 aa11.7□□□□□ -0.54
SRRT-217ENST00000618411 BUB1B-PAK6H3BSN5 160 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 GAGE5Q13069 117 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 GAGE6Q13070 117 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 CCL17Q92583 94 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 RAXQ9Y2V3 346 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 ZNF318Q5VUA4 2279 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 MFAP4P55083 255 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 IGFL2Q6UWQ7 119 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 OR11H6Q8NGC7 330 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 ZFP2Q6ZN57 461 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 SBSPONQ8IVN8 264 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 PTH2Q96A98 100 aa11.69□□□□□ -0.54
SRRT-217ENST00000618411 PRSS29PA6NIE9 313 aa11.68□□□□□ -0.54
SRRT-217ENST00000618411 TMEM262E9PQX1 116 aa11.68□□□□□ -0.54
SRRT-217ENST00000618411 ZFAND6Q6FIF0 208 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms