RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 IGHV3-53P01767 116 aa12.26□□□□□ -0.45
SMN2-213ENST00000614240 S100A10P60903 97 aa12.26□□□□□ -0.45
SMN2-213ENST00000614240 ANXA2RQ3ZCQ2 193 aa12.26□□□□□ -0.45
SMN2-213ENST00000614240 BLNKQ8WV28 456 aa12.26□□□□□ -0.45
SMN2-213ENST00000614240 AGPAT4-IT1Q9H0P7 198 aa12.26□□□□□ -0.45
SMN2-213ENST00000614240 PGPEP1Q9NXJ5 209 aa12.26□□□□□ -0.45
SMN2-213ENST00000614240 KLF12Q9Y4X4 402 aa12.26□□□□□ -0.45
SMN2-213ENST00000614240 KLLNB2CW77 178 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 EPM2AB3EWF7 344 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 ZNF324O75467 553 aaPredicted RBP12.25□□□□□ -0.45
SMN2-213ENST00000614240 HIST1H1EP10412 219 aaKnown RBP12.25□□□□□ -0.45
SMN2-213ENST00000614240 IL7P13232 177 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 S100A11P31949 105 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 SULT1A1P50225 295 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 ERVFC1-1P60608 527 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 HBG1P69891 147 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 HBG2P69892 147 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 SDHCQ99643 169 aaPredicted RBP12.25□□□□□ -0.45
SMN2-213ENST00000614240 LINC00467Q9BRT7 94 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 AAMDCQ9H7C9 122 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 TMEM14CQ9P0S9 112 aa12.25□□□□□ -0.45
SMN2-213ENST00000614240 SPINK4O60575 86 aa12.24□□□□□ -0.45
SMN2-213ENST00000614240 PYYP10082 97 aa12.24□□□□□ -0.45
SMN2-213ENST00000614240 FGF7P21781 194 aa12.24□□□□□ -0.45
SMN2-213ENST00000614240 TCL1AP56279 114 aa12.24□□□□□ -0.45
SMN2-213ENST00000614240 VWC2Q2TAL6 325 aa12.24□□□□□ -0.45
SMN2-213ENST00000614240 TMEM78Q5T7P6 136 aa12.24□□□□□ -0.45
SMN2-213ENST00000614240 STX12Q86Y82 276 aa12.24□□□□□ -0.45
SMN2-213ENST00000614240 EXOC3-AS1Q8N2X6 119 aa12.24□□□□□ -0.45
SMN2-213ENST00000614240 C2orf50Q96LR7 162 aa12.24□□□□□ -0.45
SMN2-213ENST00000614240 MRPL16Q9NX20 251 aaKnown RBP12.24□□□□□ -0.45
SMN2-213ENST00000614240 TRAV6A0A075B6T7 132 aa12.23□□□□□ -0.45
SMN2-213ENST00000614240 NDUFB4O95168 129 aa12.23□□□□□ -0.45
SMN2-213ENST00000614240 PDE6HQ13956 83 aa12.23□□□□□ -0.45
SMN2-213ENST00000614240 Q6ZRN7 208 aaPredicted RBP12.23□□□□□ -0.45
SMN2-213ENST00000614240 ST6GAL2Q96JF0 529 aa12.23□□□□□ -0.45
SMN2-213ENST00000614240 FAM19A4Q96LR4 140 aa12.23□□□□□ -0.45
SMN2-213ENST00000614240 ARPC5LQ9BPX5 153 aa12.23□□□□□ -0.45
SMN2-213ENST00000614240 SEC22CQ9BRL7 303 aa12.23□□□□□ -0.45
SMN2-213ENST00000614240 RBM38Q9H0Z9 239 aaKnown RBP12.23□□□□□ -0.45
SMN2-213ENST00000614240 GPN1Q9HCN4 374 aaPredicted RBP12.23□□□□□ -0.45
SMN2-213ENST00000614240 PRO0255Q9UI72 69 aa12.23□□□□□ -0.45
SMN2-213ENST00000614240 IGKV2-40A0A087WW87 121 aaPredicted RBP12.22□□□□□ -0.45
SMN2-213ENST00000614240 IGKV2D-40P01614 121 aaPredicted RBP12.22□□□□□ -0.45
SMN2-213ENST00000614240 FUSP35637 526 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMN2-213ENST00000614240 SLAQ13239 276 aa12.22□□□□□ -0.45
SMN2-213ENST00000614240 ICAM4Q14773 271 aa12.22□□□□□ -0.45
SMN2-213ENST00000614240 IBA57Q5T440 356 aaKnown RBP12.22□□□□□ -0.45
SMN2-213ENST00000614240 FAM122CQ6P4D5 195 aa12.22□□□□□ -0.45
SMN2-213ENST00000614240 TMEM252Q8N6L7 170 aa12.22□□□□□ -0.45
SMN2-213ENST00000614240 C8orf49Q96NF6 230 aa12.22□□□□□ -0.45
SMN2-213ENST00000614240 LYRM2Q9NU23 88 aaPredicted RBP12.22□□□□□ -0.45
SMN2-213ENST00000614240 TP53TG3Q9ULZ0 132 aa12.22□□□□□ -0.45
SMN2-213ENST00000614240 IGHV1OR15-1A0A075B7D0 117 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 TRAV9-2A0A087WT02 112 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 IGSF23A1L1A6 192 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 LYRM1O43325 122 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 TCRBP04435 133 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 NMBP08949 121 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 CRISP2P16562 243 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 MRPL23Q16540 153 aaKnown RBP12.21□□□□□ -0.45
SMN2-213ENST00000614240 ATP6V1FQ16864 119 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 C9orf47Q6ZRZ4 202 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 NFE4Q86UQ8 179 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 CHAC2Q8WUX2 184 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 C11orf1Q9H5F2 150 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 HHLA3Q9XRX5 114 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 TNFRSF18Q9Y5U5 241 aa12.21□□□□□ -0.45
SMN2-213ENST00000614240 PLA2G10O15496 165 aa12.2□□□□□ -0.46
SMN2-213ENST00000614240 PRAF2O60831 178 aa12.2□□□□□ -0.46
SMN2-213ENST00000614240 IFNA5P01569 189 aa12.2□□□□□ -0.46
SMN2-213ENST00000614240 CDPF1Q6NVV7 123 aa12.2□□□□□ -0.46
SMN2-213ENST00000614240 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
SMN2-213ENST00000614240 ZFAND2AQ8N6M9 145 aa12.2□□□□□ -0.46
SMN2-213ENST00000614240 VGLL1Q99990 258 aa12.2□□□□□ -0.46
SMN2-213ENST00000614240 NUDT15Q9NV35 164 aa12.2□□□□□ -0.46
SMN2-213ENST00000614240 HSPG2P98160 4391 aa12.19□□□□□ -0.46
SMN2-213ENST00000614240 TRGV4A0A0C4DH28 118 aa12.19□□□□□ -0.46
SMN2-213ENST00000614240 CRYBA4P53673 196 aa12.19□□□□□ -0.46
SMN2-213ENST00000614240 RAB32Q13637 225 aa12.19□□□□□ -0.46
SMN2-213ENST00000614240 GCSAMLQ5JQS6 135 aa12.19□□□□□ -0.46
SMN2-213ENST00000614240 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
SMN2-213ENST00000614240 SLC25A2Q9BXI2 301 aa12.19□□□□□ -0.46
SMN2-213ENST00000614240 NBEAP1P0C6P0 100 aa12.18□□□□□ -0.46
SMN2-213ENST00000614240 INAFM2P0DMQ5 153 aa12.18□□□□□ -0.46
SMN2-213ENST00000614240 ZNF415Q09FC8 603 aa12.18□□□□□ -0.46
SMN2-213ENST00000614240 PRR9Q5T870 116 aa12.18□□□□□ -0.46
SMN2-213ENST00000614240 Q6ZQT7 251 aa12.18□□□□□ -0.46
SMN2-213ENST00000614240 NPCDR1Q9BY65 106 aa12.18□□□□□ -0.46
SMN2-213ENST00000614240 ZNF492Q9P255 531 aa12.18□□□□□ -0.46
SMN2-213ENST00000614240 LY96Q9Y6Y9 160 aa12.18□□□□□ -0.46
SMN2-213ENST00000614240 E5RGE8 158 aa12.17□□□□□ -0.46
SMN2-213ENST00000614240 ZNF138P52744 262 aa12.17□□□□□ -0.46
SMN2-213ENST00000614240 FHL2Q14192 279 aa12.17□□□□□ -0.46
SMN2-213ENST00000614240 LYPD1Q8N2G4 141 aa12.17□□□□□ -0.46
SMN2-213ENST00000614240 THAP6Q8TBB0 222 aa12.17□□□□□ -0.46
SMN2-213ENST00000614240 PCNPQ8WW12 178 aaKnown RBP12.17□□□□□ -0.46
SMN2-213ENST00000614240 OR51M1Q9H341 326 aa12.17□□□□□ -0.46
SMN2-213ENST00000614240 H2AFB2P0C5Z0 115 aa12.16□□□□□ -0.46
SMN2-213ENST00000614240 OR10J4P0C629 311 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms