RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ZNF256Q9Y2P7 627 aaPredicted RBP8.53□□□□□ -1.04
SLIRP-212ENST00000613856 LY96Q9Y6Y9 160 aa8.53□□□□□ -1.04
SLIRP-212ENST00000613856 DYNC2H1Q8NCM8 4307 aaKnown RBP8.53□□□□□ -1.04
SLIRP-212ENST00000613856 TRBV20OR9-2A0A075B6H5 130 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 IZUMO1RA6ND01 250 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 ZNF705FA8MVS1 300 aaPredicted RBP8.52□□□□□ -1.05
SLIRP-212ENST00000613856 IGLV2-11P01706 119 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 ZNF688P0C7X2 276 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 CD33P20138 364 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 TFPI2P48307 235 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 UBE2G1P62253 170 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 CENPWQ5EE01 88 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 Q86TA4 180 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 WFDC3Q8IUB2 231 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 SMIM12Q96EX1 92 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 NAT8Q9UHE5 227 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 SORL1Q92673 2214 aa8.52□□□□□ -1.05
SLIRP-212ENST00000613856 IGKV2-40A0A087WW87 121 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-212ENST00000613856 PRAC2D3DTV9 90 aa8.51□□□□□ -1.05
SLIRP-212ENST00000613856 LTAP01374 205 aa8.51□□□□□ -1.05
SLIRP-212ENST00000613856 IGKV2D-40P01614 121 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-212ENST00000613856 GNG4P50150 75 aa8.51□□□□□ -1.05
SLIRP-212ENST00000613856 FLI1Q01543 452 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-212ENST00000613856 PNRC1Q12796 327 aaPredicted RBP8.51□□□□□ -1.05
SLIRP-212ENST00000613856 PSMG4Q5JS54 123 aa8.51□□□□□ -1.05
SLIRP-212ENST00000613856 C9orf47Q6ZRZ4 202 aa8.51□□□□□ -1.05
SLIRP-212ENST00000613856 LINC00479Q96M42 142 aa8.51□□□□□ -1.05
SLIRP-212ENST00000613856 FAM110AQ9BQ89 295 aa8.51□□□□□ -1.05
SLIRP-212ENST00000613856 GPR61Q9BZJ8 451 aa8.51□□□□□ -1.05
SLIRP-212ENST00000613856 PPP1R14DQ9NXH3 145 aa8.51□□□□□ -1.05
SLIRP-212ENST00000613856 TRAV8-1A0A0A6YYK1 113 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 TRAV34A0A0B4J273 112 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 APOC3P02656 99 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 CMC4P56277 68 aaPredicted RBP8.5□□□□□ -1.05
SLIRP-212ENST00000613856 GUCA2BQ16661 112 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 TMEM241Q24JQ0 296 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 FOXI2Q6ZQN5 318 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 SVBPQ8N300 66 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 OR8A1Q8NGG7 326 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 OR10J6PQ8NGY7 276 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 TVP23CQ96ET8 276 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 SDF2L1Q9HCN8 221 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 PSG8Q9UQ74 426 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 ZFP30Q9Y2G7 519 aa8.5□□□□□ -1.05
SLIRP-212ENST00000613856 TRBV7-9A0A0J9YWB2 115 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 IGLV2-8P01709 118 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 RPL23P62829 140 aaKnown RBP8.49□□□□□ -1.05
SLIRP-212ENST00000613856 ODF3L2Q3SX64 289 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 COX8CQ7Z4L0 72 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 LINC00477Q96M19 166 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 VGLL1Q99990 258 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 B9D2Q9BPU9 175 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 MLST8Q9BVC4 326 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 SAV1Q9H4B6 383 aaPredicted RBP8.49□□□□□ -1.05
SLIRP-212ENST00000613856 LENEPQ9Y5L5 61 aa8.49□□□□□ -1.05
SLIRP-212ENST00000613856 A0A0J9YX75 114 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 A8MTW9 85 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 SNAPINO95295 136 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 ZNF138P52744 262 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 DEFB131AP59861 70 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 SAPCD1Q5SSQ6 148 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 TMEM78Q5T7P6 136 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 EBLN2Q6P2I7 272 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 PRNTQ86SH4 94 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 BAGE2Q86Y30 109 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 TMEM183AQ8IXX5 376 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 ODF3Q96PU9 254 aa8.48□□□□□ -1.05
SLIRP-212ENST00000613856 PGPEP1LA6NFU8 196 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 B4DEV8 164 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 F6UB75 175 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 DUSP14O95147 198 aaKnown RBP8.47□□□□□ -1.05
SLIRP-212ENST00000613856 HLA-DRB4P13762 266 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 HIST1H1AQ02539 215 aaPredicted RBP8.47□□□□□ -1.05
SLIRP-212ENST00000613856 ERCC8Q13216 396 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 CLRN3Q8NCR9 226 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 OCC1Q8TAD7 63 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 FAM19A4Q96LR4 140 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 SGK494Q96LW2 274 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 PRR25Q96S07 402 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 NDFIP1Q9BT67 221 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 AGPAT4-IT1Q9H0P7 198 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 BIN3Q9NQY0 253 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 ZNF492Q9P255 531 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 HLA-DRB4X5D2U9 266 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 AGRNO00468 2067 aa8.47□□□□□ -1.05
SLIRP-212ENST00000613856 OR11H12B2RN74 326 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 K7EN84 100 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 GCGP01275 180 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
SLIRP-212ENST00000613856 DEFB1P60022 68 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 RHEBQ15382 184 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 ADIRFQ15847 76 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 Q8TAT8 98 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 ISOC2Q96AB3 205 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 CLUHP3Q96NS8 147 aa8.46□□□□□ -1.06
SLIRP-212ENST00000613856 C19orf73Q9NVV2 129 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms