RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	S100A7A	Q86SG5	101 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	LYPD1	Q8N2G4	141 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	GATD1	Q8NB37	220 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	CSMD2	Q7Z408	3487 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614		A0A1B0GW15	77 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	AVP	P01185	164 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	NDP	Q00604	133 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	VAMP3	Q15836	100 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	SCRT2	Q9NQ03	307 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614		S4R3C0	116 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	ABCA1	O95477	2261 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	TRAV8-1	A0A0A6YYK1	113 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	MRPS12	O15235	138 aa	Known RBP	10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	FCGR2B	P31994	310 aa	Predicted RBP	10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	BVES-AS1	Q5T3Y7	98 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	PRNT	Q86SH4	94 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	KRTAP1-3	Q8IUG1	177 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	DEFB125	Q8N687	156 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	WFDC11	Q8NEX6	87 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	C17orf77	Q96MU5	243 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	SH2D7	A6NKC9	451 aa	Predicted RBP	10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	MPV17L2	Q567V2	206 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	SIGLEC15	Q6ZMC9	328 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614		Q8N9W7	124 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	TMEM75	Q8N9X5	138 aa		10.81	□□□□□ -0.68
COPS7B-223	ENST00000611614	VPS13C	Q709C8	3753 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	FASN	P49327	2511 aa	Known RBP	10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	TAX1BP3	O14907	124 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	HIST1H1A	Q02539	215 aa	Predicted RBP	10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	RIG	Q13278	110 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614		Q6ZVH6	145 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	CIART	Q8N365	385 aa	Predicted RBP	10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	ZNF414	Q96IQ9	312 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	CLUHP3	Q96NS8	147 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	FOXC2	Q99958	501 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	C21orf62	Q9NYP8	219 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	THYN1	Q9P016	225 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	GCN1	Q92616	2671 aa	Known RBP	10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614		F8W735	103 aa	Predicted RBP	10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	APOH	P02749	345 aa	Predicted RBP	10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	LINC01545	Q5VT33	79 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	MOB4	Q9Y3A3	225 aa		10.8	□□□□□ -0.68
COPS7B-223	ENST00000611614	hDV102S1	A0JD36	115 aa		10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614		K7EQM0	130 aa		10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614	CD5L	O43866	347 aa		10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614	NUDT3	O95989	172 aa		10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614	LINC00173	Q6ZV60	143 aa		10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614	PRRC2A	P48634	2157 aa	Known RBP	10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614	CCDC168	Q8NDH2	2452 aa		10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614		M0QZ24	198 aa		10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614	PF4V1	P10720	104 aa		10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614	TMEM219	Q86XT9	240 aa		10.79	□□□□□ -0.68
COPS7B-223	ENST00000611614		A0A1B0GUT8	65 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614		H3BUX3	64 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	SMAD7	O15105	426 aa	Known RBP	10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	EGR2	P11161	476 aa	Predicted RBP	10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	PDE6H	Q13956	83 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614		Q6AWC8	147 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	TEX29	Q8N6K0	151 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	DPF1	Q92782	380 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	IGHV7-81	A0A0B4J1V7	117 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	PPBP	P02775	128 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	PSG3	Q16557	428 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	BCL6B	Q8N143	479 aa	Predicted RBP	10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	PSG8	Q9UQ74	426 aa		10.78	□□□□□ -0.68
COPS7B-223	ENST00000611614	SCGB2A1	O75556	95 aa		10.77	□□□□□ -0.69
COPS7B-223	ENST00000611614	LY6E	Q16553	131 aa		10.77	□□□□□ -0.69
COPS7B-223	ENST00000611614	CSPG4	Q6UVK1	2322 aa		10.77	□□□□□ -0.69
COPS7B-223	ENST00000611614	ZNF785	A8K8V0	405 aa		10.77	□□□□□ -0.69
COPS7B-223	ENST00000611614	CSN1S1	P47710	185 aa		10.77	□□□□□ -0.69
COPS7B-223	ENST00000611614		Q71RC1	249 aa	Predicted RBP	10.77	□□□□□ -0.69
COPS7B-223	ENST00000611614	C5orf56	Q8N8D9	126 aa		10.77	□□□□□ -0.69
COPS7B-223	ENST00000611614	ZC2HC1A	Q96GY0	325 aa		10.77	□□□□□ -0.69
COPS7B-223	ENST00000611614	TMUB1	Q9BVT8	246 aa		10.77	□□□□□ -0.69
COPS7B-223	ENST00000611614	IGHV3-23	P01764	117 aa		10.76	□□□□□ -0.69
COPS7B-223	ENST00000611614	COX8A	P10176	69 aa		10.76	□□□□□ -0.69
COPS7B-223	ENST00000611614	PIFO	Q8TCI5	191 aa		10.76	□□□□□ -0.69
COPS7B-223	ENST00000611614	AAMDC	Q9H7C9	122 aa		10.76	□□□□□ -0.69
COPS7B-223	ENST00000611614	AP5S1	Q9NUS5	200 aa		10.76	□□□□□ -0.69
COPS7B-223	ENST00000611614	UNC79	Q9P2D8	2635 aa		10.76	□□□□□ -0.69
COPS7B-223	ENST00000611614	OR10AG1	Q8NH19	301 aa		10.76	□□□□□ -0.69
COPS7B-223	ENST00000611614	MUC21	A0A0G2JKD1	596 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	MUC21	A0A140T8X8	626 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	OR2T8	A6NH00	312 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	CTSG	P08311	255 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	GPR183	P32249	361 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	SEC11A	P67812	179 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	PSG9	Q00887	426 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	DEFB112	Q30KQ8	113 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	MUC21	Q5SSG8	566 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	FA2H	Q7L5A8	372 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	WFDC12	Q8WWY7	111 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614		M0R3E3	92 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	ECSCR	Q19T08	205 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	PEF1	Q9UBV8	284 aa	Known RBP	10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614	CR1	P17927	2039 aa		10.75	□□□□□ -0.69
COPS7B-223	ENST00000611614		A6NDX4	124 aa		10.74	□□□□□ -0.69
COPS7B-223	ENST00000611614	RPL7	P18124	248 aa	Known RBP	10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms