RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 LINC00477Q96M19 166 aa10.26□□□□□ -0.77
TUBE1-204ENST00000603621 ODF3Q96PU9 254 aa10.26□□□□□ -0.77
TUBE1-204ENST00000603621 VGLL1Q99990 258 aa10.26□□□□□ -0.77
TUBE1-204ENST00000603621 Q9H3A6 140 aa10.26□□□□□ -0.77
TUBE1-204ENST00000603621 VPS13DQ5THJ4 4388 aa10.26□□□□□ -0.77
TUBE1-204ENST00000603621 DEFB130BP0DP73 79 aa10.25□□□□□ -0.77
TUBE1-204ENST00000603621 DEFB130AP0DP74 79 aa10.25□□□□□ -0.77
TUBE1-204ENST00000603621 CSN1S1P47710 185 aa10.25□□□□□ -0.77
TUBE1-204ENST00000603621 TMEM78Q5T7P6 136 aa10.25□□□□□ -0.77
TUBE1-204ENST00000603621 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
TUBE1-204ENST00000603621 HYLS1Q96M11 299 aa10.25□□□□□ -0.77
TUBE1-204ENST00000603621 C20orf144Q9BQM9 153 aa10.25□□□□□ -0.77
TUBE1-204ENST00000603621 TNFSF18Q9UNG2 199 aa10.25□□□□□ -0.77
TUBE1-204ENST00000603621 PLAC8L1A1L4L8 177 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 RNF222A6NCQ9 220 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 LYRM9A8MSI8 78 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 SMLR1H3BR10 107 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 RNASE4P34096 147 aaKnown RBP10.24□□□□□ -0.77
TUBE1-204ENST00000603621 CDC34P49427 236 aaPredicted RBP10.24□□□□□ -0.77
TUBE1-204ENST00000603621 BTN1A1Q13410 526 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 RPL7L1Q6DKI1 246 aaKnown RBP10.24□□□□□ -0.77
TUBE1-204ENST00000603621 C9orf47Q6ZRZ4 202 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 CCDC28AQ8IWP9 274 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 NDUFAF3Q9BU61 184 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 SH3BGRL3Q9H299 93 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 RPH3ALQ9UNE2 315 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 KMT2AQ03164 3969 aa10.24□□□□□ -0.77
TUBE1-204ENST00000603621 BORCS7-ASMTA0A0B4J1R7 106 aa10.23□□□□□ -0.77
TUBE1-204ENST00000603621 C7orf71A4D174 169 aa10.23□□□□□ -0.77
TUBE1-204ENST00000603621 PGPA6NDG6 321 aa10.23□□□□□ -0.77
TUBE1-204ENST00000603621 SLC25A5P05141 298 aaKnown RBP10.23□□□□□ -0.77
TUBE1-204ENST00000603621 GPX1P07203 203 aa10.23□□□□□ -0.77
TUBE1-204ENST00000603621 CD300CQ08708 224 aa10.23□□□□□ -0.77
TUBE1-204ENST00000603621 PQLC2Q6ZP29 291 aa10.23□□□□□ -0.77
TUBE1-204ENST00000603621 LYPD1Q8N2G4 141 aa10.23□□□□□ -0.77
TUBE1-204ENST00000603621 OR2G3Q8NGZ4 309 aa10.23□□□□□ -0.77
TUBE1-204ENST00000603621 Q8TAT8 98 aa10.23□□□□□ -0.77
TUBE1-204ENST00000603621 TMEM263Q8WUH6 116 aaKnown RBP10.23□□□□□ -0.77
TUBE1-204ENST00000603621 PSMG3Q9BT73 122 aaPredicted RBP10.23□□□□□ -0.77
TUBE1-204ENST00000603621 NOP10Q9NPE3 64 aaKnown RBP10.23□□□□□ -0.77
TUBE1-204ENST00000603621 TIMM8BQ9Y5J9 83 aaPredicted RBP10.23□□□□□ -0.77
TUBE1-204ENST00000603621 G3V3Q6 166 aa10.22□□□□□ -0.77
TUBE1-204ENST00000603621 ARPC5O15511 151 aa10.22□□□□□ -0.77
TUBE1-204ENST00000603621 ARL14EPLP0DKL9 152 aa10.22□□□□□ -0.77
TUBE1-204ENST00000603621 ZNF493Q6ZR52 646 aa10.22□□□□□ -0.77
TUBE1-204ENST00000603621 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
TUBE1-204ENST00000603621 FAM19A4Q96LR4 140 aa10.22□□□□□ -0.77
TUBE1-204ENST00000603621 ZNF492Q9P255 531 aa10.22□□□□□ -0.77
TUBE1-204ENST00000603621 KLLNB2CW77 178 aa10.21□□□□□ -0.77
TUBE1-204ENST00000603621 MBP02144 154 aa10.21□□□□□ -0.77
TUBE1-204ENST00000603621 ZNF138P52744 262 aa10.21□□□□□ -0.77
TUBE1-204ENST00000603621 SERF2P84101 59 aa10.21□□□□□ -0.77
TUBE1-204ENST00000603621 FAM74A1Q5RGS3 127 aa10.21□□□□□ -0.77
TUBE1-204ENST00000603621 CMTM2Q8TAZ6 248 aa10.21□□□□□ -0.77
TUBE1-204ENST00000603621 RAB24Q969Q5 203 aa10.21□□□□□ -0.77
TUBE1-204ENST00000603621 PYGO2Q9BRQ0 406 aa10.21□□□□□ -0.77
TUBE1-204ENST00000603621 OTORQ9NRC9 128 aa10.21□□□□□ -0.77
TUBE1-204ENST00000603621 SNURFLB1AK76 121 aa10.2□□□□□ -0.78
TUBE1-204ENST00000603621 DIRC3C9JPN6 131 aa10.2□□□□□ -0.78
TUBE1-204ENST00000603621 F5H768 121 aa10.2□□□□□ -0.78
TUBE1-204ENST00000603621 STAG3L2P0CL84 134 aa10.2□□□□□ -0.78
TUBE1-204ENST00000603621 STAG3L3P0CL85 134 aa10.2□□□□□ -0.78
TUBE1-204ENST00000603621 CRISP2P16562 243 aa10.2□□□□□ -0.78
TUBE1-204ENST00000603621 PRR9Q5T870 116 aa10.2□□□□□ -0.78
TUBE1-204ENST00000603621 Q6ZQT7 251 aa10.2□□□□□ -0.78
TUBE1-204ENST00000603621 RXFP4Q8TDU9 374 aa10.2□□□□□ -0.78
TUBE1-204ENST00000603621 GNPNAT1Q96EK6 184 aaPredicted RBP10.2□□□□□ -0.78
TUBE1-204ENST00000603621 ACTR3CQ9C0K3 210 aaPredicted RBP10.2□□□□□ -0.78
TUBE1-204ENST00000603621 CBY3A6NI87 242 aa10.19□□□□□ -0.78
TUBE1-204ENST00000603621 ZNF324O75467 553 aaPredicted RBP10.19□□□□□ -0.78
TUBE1-204ENST00000603621 GNG5P63218 68 aa10.19□□□□□ -0.78
TUBE1-204ENST00000603621 TMEM88Q6PEY1 159 aa10.19□□□□□ -0.78
TUBE1-204ENST00000603621 IQCF2Q8IXL9 164 aa10.19□□□□□ -0.78
TUBE1-204ENST00000603621 ZFAND2AQ8N6M9 145 aa10.19□□□□□ -0.78
TUBE1-204ENST00000603621 DNAH6Q9C0G6 4158 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 RBAKDNA6NC62 111 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 RGS13O14921 159 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 GAGE7O76087 117 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 ATP5G1P05496 136 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 NMBP08949 121 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 GCHFRP30047 84 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 ATP5G3P48201 142 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 GOLT1AQ6ZVE7 132 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 SSX7Q7RTT5 188 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 EIF4E3Q8N5X7 224 aaKnown RBP10.18□□□□□ -0.78
TUBE1-204ENST00000603621 FAM210BQ96KR6 192 aa10.18□□□□□ -0.78
TUBE1-204ENST00000603621 EPPK1P58107 5090 aaKnown RBP10.17□□□□□ -0.78
TUBE1-204ENST00000603621 TAAR5O14804 337 aa10.17□□□□□ -0.78
TUBE1-204ENST00000603621 UBE2DNLQ8IWF7 75 aa10.17□□□□□ -0.78
TUBE1-204ENST00000603621 GSN-AS1Q9NRJ2 163 aa10.17□□□□□ -0.78
TUBE1-204ENST00000603621 TP53TG3Q9ULZ0 132 aa10.17□□□□□ -0.78
TUBE1-204ENST00000603621 IGHV1OR15-1A0A075B7D0 117 aa10.16□□□□□ -0.78
TUBE1-204ENST00000603621 CXorf1O96002 111 aa10.16□□□□□ -0.78
TUBE1-204ENST00000603621 P0DMU3 169 aa10.16□□□□□ -0.78
TUBE1-204ENST00000603621 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
TUBE1-204ENST00000603621 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms