RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MPDU1O75352 247 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 BTCP35070 178 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 IBA57Q5T440 356 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 MIC13Q5XKP0 118 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 Q6ZTI0 123 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 TMPRSS5Q9H3S3 457 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 ZNF586Q9NXT0 402 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 TIMM9Q9Y5J7 89 aa12.29□□□□□ -0.44
SHKBP1-227ENST00000602011 A0A096LPF7 62 aa12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 K7EP13 123 aa12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 ZNF324O75467 553 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 TCRBP04435 133 aa12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 SULT1A1P50225 295 aa12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 IFITM3Q01628 133 aa12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 STX12Q86Y82 276 aa12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 C2orf50Q96LR7 162 aa12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 KRTAP1-5Q9BYS1 174 aa12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 AAMDCQ9H7C9 122 aa12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 LSM5Q9Y4Y9 91 aaKnown RBP12.28□□□□□ -0.44
SHKBP1-227ENST00000602011 TRAV5A0A0B4J249 113 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 C5orf51A6NDU8 294 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 J3KRW8 73 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 SIVA1O15304 175 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 CST7O76096 145 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 CRISP2P16562 243 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 C9orf47Q6ZRZ4 202 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 NFE4Q86UQ8 179 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 C11orf72Q8NBR9 251 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 VSIG2Q96IQ7 327 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 FAM19A4Q96LR4 140 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 GSN-AS1Q9NRJ2 163 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 LYRM2Q9NU23 88 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 FUT9Q9Y231 359 aa12.27□□□□□ -0.45
SHKBP1-227ENST00000602011 TRAV9-2A0A087WT02 112 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 TRGV1A0A0A0MS02 117 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 TRBV7-9A0A0J9YWB2 115 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 FAM25EA8MYX2 175 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 SPINK4O60575 86 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 GPX1P07203 203 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 TCL1AP56279 114 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 KRTAP10-2P60368 255 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 ENKURQ8TC29 256 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 C11orf1Q9H5F2 150 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
SHKBP1-227ENST00000602011 FAM24AA6NFZ4 105 aa12.25□□□□□ -0.45
SHKBP1-227ENST00000602011 PAX4O43316 350 aa12.25□□□□□ -0.45
SHKBP1-227ENST00000602011 BAXQ07812 192 aa12.25□□□□□ -0.45
SHKBP1-227ENST00000602011 TMEM78Q5T7P6 136 aa12.25□□□□□ -0.45
SHKBP1-227ENST00000602011 CDPF1Q6NVV7 123 aa12.25□□□□□ -0.45
SHKBP1-227ENST00000602011 ST6GAL2Q96JF0 529 aa12.25□□□□□ -0.45
SHKBP1-227ENST00000602011 AGPAT4-IT1Q9H0P7 198 aa12.25□□□□□ -0.45
SHKBP1-227ENST00000602011 PRO0255Q9UI72 69 aa12.25□□□□□ -0.45
SHKBP1-227ENST00000602011 H2AFB2P0C5Z0 115 aa12.24□□□□□ -0.45
SHKBP1-227ENST00000602011 RNASE4P34096 147 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-227ENST00000602011 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-227ENST00000602011 TMEM252Q8N6L7 170 aa12.24□□□□□ -0.45
SHKBP1-227ENST00000602011 M0R3E3 92 aa12.23□□□□□ -0.45
SHKBP1-227ENST00000602011 CCSO14618 274 aa12.23□□□□□ -0.45
SHKBP1-227ENST00000602011 RGS13O14921 159 aa12.23□□□□□ -0.45
SHKBP1-227ENST00000602011 NDUFB4O95168 129 aa12.23□□□□□ -0.45
SHKBP1-227ENST00000602011 LINC00315P59091 139 aa12.23□□□□□ -0.45
SHKBP1-227ENST00000602011 UBE2L5PA0A1B0GUS4 154 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 FGF7P21781 194 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 ERVFC1-1P60608 527 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 CD300CQ08708 224 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 ERCC8Q13216 396 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 IL15RAQ13261 267 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 VGLL1Q99990 258 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 ARPC5LQ9BPX5 153 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 GPN1Q9HCN4 374 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 NUDT15Q9NV35 164 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 HHLA3Q9XRX5 114 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 KLF12Q9Y4X4 402 aa12.22□□□□□ -0.45
SHKBP1-227ENST00000602011 TRAV6A0A075B6T7 132 aa12.21□□□□□ -0.45
SHKBP1-227ENST00000602011 IGHV1OR15-1A0A075B7D0 117 aa12.21□□□□□ -0.45
SHKBP1-227ENST00000602011 NBEAP1P0C6P0 100 aa12.21□□□□□ -0.45
SHKBP1-227ENST00000602011 BTN1A1Q13410 526 aa12.21□□□□□ -0.45
SHKBP1-227ENST00000602011 Q6ZRN7 208 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-227ENST00000602011 KCNIP2Q9NS61 270 aa12.21□□□□□ -0.45
SHKBP1-227ENST00000602011 ZNF492Q9P255 531 aa12.21□□□□□ -0.45
SHKBP1-227ENST00000602011 NXPH4O95158 308 aa12.2□□□□□ -0.46
SHKBP1-227ENST00000602011 FUSP35637 526 aaKnown RBP eCLIP12.2□□□□□ -0.46
SHKBP1-227ENST00000602011 S100A10P60903 97 aa12.2□□□□□ -0.46
SHKBP1-227ENST00000602011 ICAM4Q14773 271 aa12.2□□□□□ -0.46
SHKBP1-227ENST00000602011 NEGR1Q7Z3B1 354 aa12.2□□□□□ -0.46
SHKBP1-227ENST00000602011 IQCF2Q8IXL9 164 aa12.2□□□□□ -0.46
SHKBP1-227ENST00000602011 BLNKQ8WV28 456 aa12.2□□□□□ -0.46
SHKBP1-227ENST00000602011 NPCDR1Q9BY65 106 aa12.2□□□□□ -0.46
SHKBP1-227ENST00000602011 EPM2AB3EWF7 344 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 PTTG1O95997 202 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 CSN1S1P47710 185 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 ZNF138P52744 262 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 CRYBA4P53673 196 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 LYPD5Q6UWN5 251 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 LYPD1Q8N2G4 141 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 EXOC3-AS1Q8N2X6 119 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 ZFAND2AQ8N6M9 145 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 MARVELD1Q9BSK0 173 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 MRPL32Q9BYC8 188 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms