RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
IRF3-230ENST00000601809 ATP6V0CP27449 155 aa12.38□□□□□ -0.43
IRF3-230ENST00000601809 UBE2L3P68036 154 aaKnown RBP12.38□□□□□ -0.43
IRF3-230ENST00000601809 ACOT6Q3I5F7 207 aaPredicted RBP12.38□□□□□ -0.43
IRF3-230ENST00000601809 FAM122CQ6P4D5 195 aa12.38□□□□□ -0.43
IRF3-230ENST00000601809 ZFAND2AQ8N6M9 145 aa12.38□□□□□ -0.43
IRF3-230ENST00000601809 OR2T35Q8NGX2 323 aa12.38□□□□□ -0.43
IRF3-230ENST00000601809 BIRC6Q9NR09 4857 aa12.37□□□□□ -0.43
IRF3-230ENST00000601809 TAS2R45P59539 299 aa12.37□□□□□ -0.43
IRF3-230ENST00000601809 PRR9Q5T870 116 aa12.37□□□□□ -0.43
IRF3-230ENST00000601809 ZNF493Q6ZR52 646 aa12.37□□□□□ -0.43
IRF3-230ENST00000601809 HSD17B11Q8NBQ5 300 aa12.37□□□□□ -0.43
IRF3-230ENST00000601809 TMEM263Q8WUH6 116 aaKnown RBP12.37□□□□□ -0.43
IRF3-230ENST00000601809 C16orf74Q96GX8 76 aa12.37□□□□□ -0.43
IRF3-230ENST00000601809 Q9H3A6 140 aa12.37□□□□□ -0.43
IRF3-230ENST00000601809 SLC25A5P05141 298 aaKnown RBP12.36□□□□□ -0.43
IRF3-230ENST00000601809 NMBP08949 121 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 RANP62826 216 aaKnown RBP12.36□□□□□ -0.43
IRF3-230ENST00000601809 PQLC2Q6ZP29 291 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 LINC00612Q8N6U2 182 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 OR10G4Q8NGN3 311 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 SUN5Q8TC36 379 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 FAM210BQ96KR6 192 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 LINC00467Q9BRT7 94 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 SH3BGRL3Q9H299 93 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 ZNF492Q9P255 531 aa12.36□□□□□ -0.43
IRF3-230ENST00000601809 FXYD6-FXYD2A0A087WZ82 144 aa12.35□□□□□ -0.43
IRF3-230ENST00000601809 TRAV12-3A0A0B4J271 114 aa12.35□□□□□ -0.43
IRF3-230ENST00000601809 C7orf71A4D174 169 aa12.35□□□□□ -0.43
IRF3-230ENST00000601809 RBAKDNA6NC62 111 aa12.35□□□□□ -0.43
IRF3-230ENST00000601809 J3KRW8 73 aa12.35□□□□□ -0.43
IRF3-230ENST00000601809 STAG3L2P0CL84 134 aa12.35□□□□□ -0.43
IRF3-230ENST00000601809 STAG3L3P0CL85 134 aa12.35□□□□□ -0.43
IRF3-230ENST00000601809 DAD1P61803 113 aa12.35□□□□□ -0.43
IRF3-230ENST00000601809 CD300CQ08708 224 aa12.35□□□□□ -0.43
IRF3-230ENST00000601809 RPL7L1Q6DKI1 246 aaKnown RBP12.35□□□□□ -0.43
IRF3-230ENST00000601809 TRBV7-9A0A0J9YWB2 115 aa12.34□□□□□ -0.43
IRF3-230ENST00000601809 SERF2P84101 59 aa12.34□□□□□ -0.43
IRF3-230ENST00000601809 BTN1A1Q13410 526 aa12.34□□□□□ -0.43
IRF3-230ENST00000601809 PYGO2Q9BRQ0 406 aa12.34□□□□□ -0.43
IRF3-230ENST00000601809 TIMM8BQ9Y5J9 83 aaPredicted RBP12.34□□□□□ -0.43
IRF3-230ENST00000601809 DNAH17Q9UFH2 4485 aa12.33□□□□□ -0.43
IRF3-230ENST00000601809 DIRC3C9JPN6 131 aa12.33□□□□□ -0.44
IRF3-230ENST00000601809 HTN1P15515 57 aa12.33□□□□□ -0.44
IRF3-230ENST00000601809 CDC34P49427 236 aaPredicted RBP12.33□□□□□ -0.44
IRF3-230ENST00000601809 ZNF138P52744 262 aa12.33□□□□□ -0.44
IRF3-230ENST00000601809 Q6ZQT7 251 aa12.33□□□□□ -0.44
IRF3-230ENST00000601809 SSX7Q7RTT5 188 aa12.33□□□□□ -0.44
IRF3-230ENST00000601809 ARL6IP6Q8N6S5 226 aa12.33□□□□□ -0.44
IRF3-230ENST00000601809 INO80EQ8NBZ0 244 aaPredicted RBP12.33□□□□□ -0.44
IRF3-230ENST00000601809 NDUFAF3Q9BU61 184 aa12.33□□□□□ -0.44
IRF3-230ENST00000601809 OTORQ9NRC9 128 aa12.33□□□□□ -0.44
IRF3-230ENST00000601809 CYTL1Q9NRR1 136 aa12.33□□□□□ -0.44
IRF3-230ENST00000601809 A0A1W2PPV4 95 aa12.32□□□□□ -0.44
IRF3-230ENST00000601809 HMGB3O15347 200 aaKnown RBP12.32□□□□□ -0.44
IRF3-230ENST00000601809 TMEM78Q5T7P6 136 aa12.32□□□□□ -0.44
IRF3-230ENST00000601809 C11orf72Q8NBR9 251 aa12.32□□□□□ -0.44
IRF3-230ENST00000601809 Q8TAT8 98 aa12.32□□□□□ -0.44
IRF3-230ENST00000601809 RAB24Q969Q5 203 aa12.32□□□□□ -0.44
IRF3-230ENST00000601809 NOP10Q9NPE3 64 aaKnown RBP12.32□□□□□ -0.44
IRF3-230ENST00000601809 FAT2Q9NYQ8 4349 aa12.32□□□□□ -0.44
IRF3-230ENST00000601809 CBY3A6NI87 242 aa12.31□□□□□ -0.44
IRF3-230ENST00000601809 SMLR1H3BR10 107 aa12.31□□□□□ -0.44
IRF3-230ENST00000601809 ARL14EPLP0DKL9 152 aa12.31□□□□□ -0.44
IRF3-230ENST00000601809 DEFB130BP0DP73 79 aa12.31□□□□□ -0.44
IRF3-230ENST00000601809 DEFB130AP0DP74 79 aa12.31□□□□□ -0.44
IRF3-230ENST00000601809 ANXA2RQ3ZCQ2 193 aa12.31□□□□□ -0.44
IRF3-230ENST00000601809 PGPA6NDG6 321 aa12.3□□□□□ -0.44
IRF3-230ENST00000601809 MBP02144 154 aa12.3□□□□□ -0.44
IRF3-230ENST00000601809 DAZ2Q13117 558 aaKnown RBP12.3□□□□□ -0.44
IRF3-230ENST00000601809 ZNF726P1Q15940 193 aa12.3□□□□□ -0.44
IRF3-230ENST00000601809 TMEM88Q6PEY1 159 aa12.3□□□□□ -0.44
IRF3-230ENST00000601809 RXFP4Q8TDU9 374 aa12.3□□□□□ -0.44
IRF3-230ENST00000601809 TMED6Q8WW62 240 aa12.3□□□□□ -0.44
IRF3-230ENST00000601809 GNPNAT1Q96EK6 184 aaPredicted RBP12.3□□□□□ -0.44
IRF3-230ENST00000601809 LENEPQ9Y5L5 61 aa12.3□□□□□ -0.44
IRF3-230ENST00000601809 HECTD4Q9Y4D8 3996 aa12.29□□□□□ -0.44
IRF3-230ENST00000601809 GPX1P07203 203 aa12.29□□□□□ -0.44
IRF3-230ENST00000601809 HTN3P15516 51 aa12.29□□□□□ -0.44
IRF3-230ENST00000601809 GCHFRP30047 84 aa12.29□□□□□ -0.44
IRF3-230ENST00000601809 RNASE4P34096 147 aaKnown RBP12.29□□□□□ -0.44
IRF3-230ENST00000601809 CSN1S1P47710 185 aa12.29□□□□□ -0.44
IRF3-230ENST00000601809 OR11H4Q8NGC9 324 aa12.29□□□□□ -0.44
IRF3-230ENST00000601809 ARPC5O15511 151 aa12.28□□□□□ -0.44
IRF3-230ENST00000601809 CCDC28AQ8IWP9 274 aa12.28□□□□□ -0.44
IRF3-230ENST00000601809 EIF4E3Q8N5X7 224 aaKnown RBP12.28□□□□□ -0.44
IRF3-230ENST00000601809 TVP23CQ96ET8 276 aa12.28□□□□□ -0.44
IRF3-230ENST00000601809 NACAE9PAV3 2078 aa12.27□□□□□ -0.45
IRF3-230ENST00000601809 BORCS7-ASMTA0A0B4J1R7 106 aa12.27□□□□□ -0.45
IRF3-230ENST00000601809 TAAR5O14804 337 aa12.27□□□□□ -0.45
IRF3-230ENST00000601809 ATP5G1P05496 136 aa12.27□□□□□ -0.45
IRF3-230ENST00000601809 ATP5G3P48201 142 aa12.27□□□□□ -0.45
IRF3-230ENST00000601809 Q6AWC8 147 aa12.27□□□□□ -0.45
IRF3-230ENST00000601809 ST6GAL2Q96JF0 529 aa12.27□□□□□ -0.45
IRF3-230ENST00000601809 HYLS1Q96M11 299 aa12.27□□□□□ -0.45
IRF3-230ENST00000601809 TP53TG3Q9ULZ0 132 aa12.27□□□□□ -0.45
IRF3-230ENST00000601809 P0DMU3 169 aa12.26□□□□□ -0.45
IRF3-230ENST00000601809 FAM231AP0DMU4 169 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms