RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 DNAH6Q9C0G6 4158 aa12.19□□□□□ -0.46
HERC3-214ENST00000601319 TRBV7-9A0A0J9YWB2 115 aa12.18□□□□□ -0.46
HERC3-214ENST00000601319 ERCC8Q13216 396 aa12.18□□□□□ -0.46
HERC3-214ENST00000601319 Q5BKY6 102 aa12.18□□□□□ -0.46
HERC3-214ENST00000601319 FAM122CQ6P4D5 195 aa12.18□□□□□ -0.46
HERC3-214ENST00000601319 PQLC2Q6ZP29 291 aa12.18□□□□□ -0.46
HERC3-214ENST00000601319 PYGO2Q9BRQ0 406 aa12.18□□□□□ -0.46
HERC3-214ENST00000601319 AGPAT4-IT1Q9H0P7 198 aa12.18□□□□□ -0.46
HERC3-214ENST00000601319 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
HERC3-214ENST00000601319 IGKV2-40A0A087WW87 121 aaPredicted RBP12.17□□□□□ -0.46
HERC3-214ENST00000601319 C7orf71A4D174 169 aa12.17□□□□□ -0.46
HERC3-214ENST00000601319 RBAKDNA6NC62 111 aa12.17□□□□□ -0.46
HERC3-214ENST00000601319 IGKV2D-40P01614 121 aaPredicted RBP12.17□□□□□ -0.46
HERC3-214ENST00000601319 RAB2AP61019 212 aa12.17□□□□□ -0.46
HERC3-214ENST00000601319 TMEM78Q5T7P6 136 aa12.17□□□□□ -0.46
HERC3-214ENST00000601319 Q9H3A6 140 aa12.17□□□□□ -0.46
HERC3-214ENST00000601319 TRAV12-3A0A0B4J271 114 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 RNF222A6NCQ9 220 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 P0DMU3 169 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 FAM231AP0DMU4 169 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 FAM231CP0DMU5 169 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 HTN1P15515 57 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 CCDC28AQ8IWP9 274 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 HSD17B11Q8NBQ5 300 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 INO80EQ8NBZ0 244 aaPredicted RBP12.16□□□□□ -0.46
HERC3-214ENST00000601319 OR2T35Q8NGX2 323 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 LINC00467Q9BRT7 94 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 TNFSF18Q9UNG2 199 aa12.16□□□□□ -0.46
HERC3-214ENST00000601319 EPPK1P58107 5090 aaKnown RBP12.16□□□□□ -0.46
HERC3-214ENST00000601319 A0A1W2PPV4 95 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 CSN1S1P47710 185 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 ZNF138P52744 262 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 RANP62826 216 aaKnown RBP12.15□□□□□ -0.46
HERC3-214ENST00000601319 SERF2P84101 59 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 ZFAND2AQ8N6M9 145 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 LINC00612Q8N6U2 182 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 OR10G4Q8NGN3 311 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 OR10G9Q8NGN4 311 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 OR10G7Q8NGN6 311 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 VGLL1Q99990 258 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 ZNF492Q9P255 531 aa12.15□□□□□ -0.46
HERC3-214ENST00000601319 CBY3A6NI87 242 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 G3V3Q6 166 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 J3KRW8 73 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 ZNF324O75467 553 aaPredicted RBP12.14□□□□□ -0.47
HERC3-214ENST00000601319 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 HTN3P15516 51 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 ATP6V0CP27449 155 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 BTN1A1Q13410 526 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 ARL6IP6Q8N6S5 226 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 RXFP4Q8TDU9 374 aa12.14□□□□□ -0.47
HERC3-214ENST00000601319 FXYD6-FXYD2A0A087WZ82 144 aa12.13□□□□□ -0.47
HERC3-214ENST00000601319 MBP02144 154 aa12.13□□□□□ -0.47
HERC3-214ENST00000601319 ATP5G1P05496 136 aa12.13□□□□□ -0.47
HERC3-214ENST00000601319 ATP5G3P48201 142 aa12.13□□□□□ -0.47
HERC3-214ENST00000601319 CDC34P49427 236 aaPredicted RBP12.13□□□□□ -0.47
HERC3-214ENST00000601319 CD300CQ08708 224 aa12.13□□□□□ -0.47
HERC3-214ENST00000601319 TMEM88Q6PEY1 159 aa12.13□□□□□ -0.47
HERC3-214ENST00000601319 ZNF680Q8NEM1 530 aa12.13□□□□□ -0.47
HERC3-214ENST00000601319 NOP10Q9NPE3 64 aaKnown RBP12.13□□□□□ -0.47
HERC3-214ENST00000601319 OTORQ9NRC9 128 aa12.13□□□□□ -0.47
HERC3-214ENST00000601319 FRAS1Q86XX4 4008 aa12.13□□□□□ -0.47
HERC3-214ENST00000601319 SNURFLB1AK76 121 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 DIRC3C9JPN6 131 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 GPX1P07203 203 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 STAG3L2P0CL84 134 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 STAG3L3P0CL85 134 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 DAZ2Q13117 558 aaKnown RBP12.12□□□□□ -0.47
HERC3-214ENST00000601319 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 POM121L12Q8N7R1 296 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 C15orf53Q8NAA6 179 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 TMED6Q8WW62 240 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 GNPNAT1Q96EK6 184 aaPredicted RBP12.12□□□□□ -0.47
HERC3-214ENST00000601319 LENEPQ9Y5L5 61 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
HERC3-214ENST00000601319 BORCS7-ASMTA0A0B4J1R7 106 aa12.11□□□□□ -0.47
HERC3-214ENST00000601319 EIF3GO75821 320 aaKnown RBP eCLIP12.11□□□□□ -0.47
HERC3-214ENST00000601319 ARL14EPLP0DKL9 152 aa12.11□□□□□ -0.47
HERC3-214ENST00000601319 ANXA2RQ3ZCQ2 193 aa12.11□□□□□ -0.47
HERC3-214ENST00000601319 PRR9Q5T870 116 aa12.11□□□□□ -0.47
HERC3-214ENST00000601319 EIF4E3Q8N5X7 224 aaKnown RBP12.11□□□□□ -0.47
HERC3-214ENST00000601319 Q8TAT8 98 aa12.11□□□□□ -0.47
HERC3-214ENST00000601319 SUN5Q8TC36 379 aa12.11□□□□□ -0.47
HERC3-214ENST00000601319 SH3BGRL3Q9H299 93 aa12.11□□□□□ -0.47
HERC3-214ENST00000601319 RNASE4P34096 147 aaKnown RBP12.1□□□□□ -0.47
HERC3-214ENST00000601319 RPL7L1Q6DKI1 246 aaKnown RBP12.1□□□□□ -0.47
HERC3-214ENST00000601319 C11orf72Q8NBR9 251 aa12.1□□□□□ -0.47
HERC3-214ENST00000601319 CMTM2Q8TAZ6 248 aa12.1□□□□□ -0.47
HERC3-214ENST00000601319 RNF212Q495C1 297 aa12.09□□□□□ -0.47
HERC3-214ENST00000601319 IBA57Q5T440 356 aaKnown RBP12.09□□□□□ -0.47
HERC3-214ENST00000601319 RAB24Q969Q5 203 aa12.09□□□□□ -0.47
HERC3-214ENST00000601319 PGPA6NDG6 321 aa12.08□□□□□ -0.48
HERC3-214ENST00000601319 F5H768 121 aa12.08□□□□□ -0.48
HERC3-214ENST00000601319 TAAR5O14804 337 aa12.08□□□□□ -0.48
HERC3-214ENST00000601319 HMGB3O15347 200 aaKnown RBP12.08□□□□□ -0.48
HERC3-214ENST00000601319 ST6GAL2Q96JF0 529 aa12.08□□□□□ -0.48
HERC3-214ENST00000601319 C18orf15Q96N68 181 aa12.08□□□□□ -0.48
HERC3-214ENST00000601319 RGS13O14921 159 aa12.07□□□□□ -0.48
HERC3-214ENST00000601319 ARPC5O15511 151 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms