RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 APRG1Q8IVJ8 170 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR51G1Q8NGK1 321 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR1S1Q8NH92 325 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 C16orf74Q96GX8 76 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 TRGV9Q99603 122 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 SDHCQ99643 169 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 C11orf68Q9H3H3 251 aaKnown RBP2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 RBKSQ9H477 322 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 RABAC1Q9UI14 185 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 DYNC2H1Q8NCM8 4307 aaKnown RBP2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 SACSQ9NZJ4 4579 aa2.42□□□□□ -2.02
CKS1BP3-201ENST00000600888 LYSTQ99698 3801 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 PLECQ15149 4684 aaKnown RBP2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGKV3-7A0A075B6H7 116 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGKV1D-37A0A075B6S9 117 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGKV1OR2-108A0A075B7D4 117 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGHV3OR16-13A0A075B7E8 117 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGHV3-74A0A0B4J1X5 117 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 NUPR2A6NF83 97 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 CENPXA8MT69 81 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 ZNF705EA8MWA4 302 aaPredicted RBP2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 SNRPGP15A8MWD9 76 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 H3BTX0 84 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 K7EPK0 472 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 SYNGR2O43760 224 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 IFNA4P05014 189 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 IL4P05112 153 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR4E1P0C645 316 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 IL7P13232 177 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 S100A7P31151 101 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 BTCP35070 178 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 TFPI2P48307 235 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 TCTAP57738 103 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 TAS2R30P59541 319 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 DHRS2Q13268 280 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 SAMD13Q5VXD3 122 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 SPATA31B1PQ5VZV4 182 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 TMEM144Q7Z5S9 345 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 TMED4Q7Z7H5 227 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 FAM24BQ8N5W8 94 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 STXBP6Q8NFX7 210 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR4D5Q8NGN0 318 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 MITD1Q8WV92 249 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 ACY3Q96HD9 319 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 SLC35E1Q96K37 410 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 LINC00167Q96N53 147 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 RARRES2Q99969 163 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 MFFQ9GZY8 342 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 RYR2Q92736 4967 aa2.41□□□□□ -2.02
CKS1BP3-201ENST00000600888 UBR4Q5T4S7 5183 aa2.4□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGHV3-66A0A0C4DH42 116 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 A8MTW9 85 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 E9PLD3 99 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 H3BMM0 161 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 WRBO00258 174 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 ISLRO14498 428 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 PLA2G10O15496 165 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 LYRM1O43325 122 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 IFNA21P01568 189 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF688P0C7X2 276 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 IAPPP10997 89 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 HLA-DRB4P13762 266 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 MIFP14174 115 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 INPP1P49441 399 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 PSMB3P49720 205 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 PLP1P60201 277 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 NUTF2P61970 127 aaKnown RBP2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 SNRPD3P62318 126 aaKnown RBP2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 SELENOTP62341 195 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 RPL32P62910 135 aaKnown RBP2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 EWSR1Q01844 656 aaKnown RBP eCLIP2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF90Q03938 601 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 TRIQKQ629K1 86 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 CEMP1Q6PRD7 247 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 TMEM14EPQ6UXP3 125 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 Q6ZVH6 145 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 Q8NAQ8 132 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 BPIFCQ8NFQ6 507 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR11H2Q8NH07 326 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 COQ8AQ8NI60 647 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 SMIM8Q96KF7 97 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 GPR82Q96P67 336 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 CCDC32Q9BV29 185 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 GGACTQ9BVM4 153 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 Q9H3A6 140 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 NPVFQ9HCQ7 196 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 KLK5Q9Y337 293 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 HLA-DRB4X5D2U9 266 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 NACAE9PAV3 2078 aa2.4□□□□□ -2.03
CKS1BP3-201ENST00000600888 DNAH1Q9P2D7 4330 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 FAM231BA6NCW3 169 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 SMIM9A6NGZ8 99 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF98A6NK75 572 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 KNCNA6PVL3 124 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF705FA8MVS1 300 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 C11orf94C9JXX5 98 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 DEDDO75618 318 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 ADAP1O75689 374 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 CA1P00915 261 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 TCRBP04435 133 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms