RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 RPH3ALQ9UNE2 315 aa9.44□□□□□ -0.9
SRRM1-223ENST00000600523 IGKV2-40A0A087WW87 121 aaPredicted RBP9.43□□□□□ -0.9
SRRM1-223ENST00000600523 TEX48A0A1B0GUV7 120 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 A0A1W2PRE2 83 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 CXorf65A6NEN9 183 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 H7BYZ3 331 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 IGKV2D-40P01614 121 aaPredicted RBP9.43□□□□□ -0.9
SRRM1-223ENST00000600523 GPX1P07203 203 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 NMBP08949 121 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 CT45A10P0DMU9 189 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 PRB4P10163 310 aaPredicted RBP9.43□□□□□ -0.9
SRRM1-223ENST00000600523 ZNF138P52744 262 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 Q8NAQ8 132 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 C5orf17Q8NAS9 161 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 FAM213BQ8TBF2 198 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 AGPAT4-IT1Q9H0P7 198 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 X6R8D5 127 aa9.43□□□□□ -0.9
SRRM1-223ENST00000600523 TRBV7-9A0A0J9YWB2 115 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 FBLL1A6NHQ2 334 aaKnown RBP9.42□□□□□ -0.9
SRRM1-223ENST00000600523 DIRC3C9JPN6 131 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 J3KRW8 73 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 DEFB4AO15263 64 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 IFNA7P01567 189 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 HTN1P15515 57 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 TAS2R60P59551 318 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 ERCC8Q13216 396 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 CCDC28AQ8IWP9 274 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 SUN5Q8TC36 379 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 SFT2D1Q8WV19 159 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 NDFIP1Q9BT67 221 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 STAB2Q8WWQ8 2551 aa9.42□□□□□ -0.9
SRRM1-223ENST00000600523 HUWE1Q7Z6Z7 4374 aaKnown RBP9.41□□□□□ -0.9
SRRM1-223ENST00000600523 LOC102723971A0A1B0GUV8 181 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 A0A1B0GVG6 124 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 CRXO43186 299 aaPredicted RBP9.41□□□□□ -0.9
SRRM1-223ENST00000600523 H2AFB1P0C5Y9 115 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 SPART-AS1P0CW21 52 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 PPT1P50897 306 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 EMP1P54849 157 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 FGF8P55075 233 aaPredicted RBP9.41□□□□□ -0.9
SRRM1-223ENST00000600523 SUMO1P63165 101 aaKnown RBP9.41□□□□□ -0.9
SRRM1-223ENST00000600523 ZNF726P1Q15940 193 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 GFI1BQ5VTD9 330 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 VGLL1Q99990 258 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 ZNF492Q9P255 531 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 LENEPQ9Y5L5 61 aa9.41□□□□□ -0.9
SRRM1-223ENST00000600523 TRAV12-3A0A0B4J271 114 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 C7orf71A4D174 169 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 NUPR2A6NF83 97 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 F6UZH7 168 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 RBMY1A1P0DJD3 496 aaKnown RBP9.4□□□□□ -0.9
SRRM1-223ENST00000600523 RBMY1CP0DJD4 496 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 RNASE4P34096 147 aaKnown RBP9.4□□□□□ -0.9
SRRM1-223ENST00000600523 PMS2P11Q13670 270 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 RBMY1FQ15415 496 aaKnown RBP9.4□□□□□ -0.9
SRRM1-223ENST00000600523 ZFAND6Q6FIF0 208 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 ZNF493Q6ZR52 646 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 GOLT1AQ6ZVE7 132 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 SSX7Q7RTT5 188 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 C16orf74Q96GX8 76 aa9.4□□□□□ -0.9
SRRM1-223ENST00000600523 TCRAP04437 139 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 CRISP2P16562 243 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 FHITP49789 147 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 UBE2G2P60604 165 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 CASC10Q5T4H9 136 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 CST9LP1Q5W188 147 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 C9orf62Q8N4C0 152 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 CYB561D1Q8N8Q1 229 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 MBD3L1Q8WWY6 194 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 PYGO2Q9BRQ0 406 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 TCEAL7Q9BRU2 100 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 ATG101Q9BSB4 218 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 EPDR1Q9UM22 224 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 KLK5Q9Y337 293 aaPredicted RBP9.39□□□□□ -0.91
SRRM1-223ENST00000600523 ARL2-SNX15V9GYD0 113 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 TENM3Q9P273 2699 aa9.39□□□□□ -0.91
SRRM1-223ENST00000600523 ZNF705GA8MUZ8 300 aaPredicted RBP9.38□□□□□ -0.91
SRRM1-223ENST00000600523 KLLNB2CW77 178 aa9.38□□□□□ -0.91
SRRM1-223ENST00000600523 C11orf94C9JXX5 98 aa9.38□□□□□ -0.91
SRRM1-223ENST00000600523 Q8TAT8 98 aa9.38□□□□□ -0.91
SRRM1-223ENST00000600523 HIST1H2BAQ96A08 127 aa9.38□□□□□ -0.91
SRRM1-223ENST00000600523 TMPRSS5Q9H3S3 457 aa9.38□□□□□ -0.91
SRRM1-223ENST00000600523 FAM74A7A6NL05 159 aa9.37□□□□□ -0.91
SRRM1-223ENST00000600523 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
SRRM1-223ENST00000600523 RGS13O14921 159 aa9.37□□□□□ -0.91
SRRM1-223ENST00000600523 SULT1A2P50226 295 aa9.37□□□□□ -0.91
SRRM1-223ENST00000600523 NANOS2P60321 138 aaKnown RBP9.37□□□□□ -0.91
SRRM1-223ENST00000600523 GNG5P63218 68 aa9.37□□□□□ -0.91
SRRM1-223ENST00000600523 CD300CQ08708 224 aa9.37□□□□□ -0.91
SRRM1-223ENST00000600523 TMEM263Q8WUH6 116 aaKnown RBP9.37□□□□□ -0.91
SRRM1-223ENST00000600523 FAM19A4Q96LR4 140 aa9.37□□□□□ -0.91
SRRM1-223ENST00000600523 TREM1Q9NP99 234 aa9.37□□□□□ -0.91
SRRM1-223ENST00000600523 YTHDF2Q9Y5A9 579 aaKnown RBP9.37□□□□□ -0.91
SRRM1-223ENST00000600523 A0A1B0GV50 99 aa9.36□□□□□ -0.91
SRRM1-223ENST00000600523 LYRM9A8MSI8 78 aa9.36□□□□□ -0.91
SRRM1-223ENST00000600523 SNURFLB1AK76 121 aa9.36□□□□□ -0.91
SRRM1-223ENST00000600523 IFNA1P01562 189 aa9.36□□□□□ -0.91
SRRM1-223ENST00000600523 BTN1A1Q13410 526 aa9.36□□□□□ -0.91
SRRM1-223ENST00000600523 SAPCD1Q5SSQ6 148 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms