RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 ICOSQ9Y6W8 199 aa5.86□□□□□ -1.47
SHKBP1-220ENST00000599716 FAT3Q8TDW7 4589 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 C7orf66A4D0T2 115 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 KRTAP29-1A8MX34 341 aaPredicted RBP5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 SPINK4O60575 86 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 ZNF324O75467 553 aaPredicted RBP5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 CST7O76096 145 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 MBPP02686 304 aaPredicted RBP5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 OR4E1P0C645 316 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 SFTA3P0C7M3 94 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 PYYP10082 97 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 TMBIM6P55061 237 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 AP3S2P59780 193 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 ICAM4Q14773 271 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 GCSAMLQ5JQS6 135 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 NRARPQ7Z6K4 114 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 EXOC3-AS1Q8N2X6 119 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 BLNKQ8WV28 456 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 AGPAT4-IT1Q9H0P7 198 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 PTTG2Q9NZH5 202 aa5.85□□□□□ -1.47
SHKBP1-220ENST00000599716 PIGBOS1A0A0B4J2F0 54 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 EREGO14944 169 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 NDUFB4O95168 129 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 IFNA5P01569 189 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 CAMLGP49069 296 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 CRYBA4P53673 196 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 FHL2Q14192 279 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 BAK1Q16611 211 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 C4orf46Q504U0 113 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 EIF4E3Q8N5X7 224 aaKnown RBP5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 Q8TAT8 98 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 VGLL1Q99990 258 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 LSM5Q9Y4Y9 91 aaKnown RBP5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 PXMP4Q9Y6I8 212 aa5.84□□□□□ -1.47
SHKBP1-220ENST00000599716 LOC100131303A0A0U1RQF7 123 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 UBE2L5PA0A1B0GUS4 154 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 FAM24AA6NFZ4 105 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 KLLNB2CW77 178 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 FNDC10F2Z333 226 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 TSC22D2O75157 780 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 NDUFB6O95139 128 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 SLC25A5P05141 298 aaKnown RBP5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 GCSHP23434 173 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 BTCP35070 178 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 BCAP31P51572 246 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 TCL1AP56279 114 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 MUC21Q5SSG8 566 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 FAM122CQ6P4D5 195 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 S100A7AQ86SG5 101 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 ZFAND2AQ8N6M9 145 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 ZNF680Q8NEM1 530 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 ZNF479Q96JC4 524 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 ST6GAL2Q96JF0 529 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 FAM19A4Q96LR4 140 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 ODF3Q96PU9 254 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 DNAJC4Q9NNZ3 241 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 FAM30AQ9NZY2 134 aa5.83□□□□□ -1.48
SHKBP1-220ENST00000599716 TRBV19A0A075B6N1 114 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 FAM25EA8MYX2 175 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 RGS13O14921 159 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 NOL3O60936 208 aaKnown RBP5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 MPDU1O75352 247 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 GPX1P07203 203 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 CAV2P51636 162 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 ZNF415Q09FC8 603 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 ANXA2RQ3ZCQ2 193 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 PXDC1Q5TGL8 231 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 CDPF1Q6NVV7 123 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 LINC00467Q9BRT7 94 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 SRRQ9GZT4 340 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 MSRB1Q9NZV6 116 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 PRO0255Q9UI72 69 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 HHLA3Q9XRX5 114 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 LY96Q9Y6Y9 160 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
SHKBP1-220ENST00000599716 IGHV1OR15-1A0A075B7D0 117 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 TRGV4A0A0C4DH28 118 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 CCDC160A6NGH7 325 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 K7EQD1 137 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 L7N2F9 121 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 EIF3GO75821 320 aaKnown RBP eCLIP5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 GYPEP15421 78 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 VAMP2P63027 116 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 BAXQ07812 192 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 MRPL23Q16540 153 aaKnown RBP5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 Q6ZRG5 221 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 Q6ZSN1 163 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 NEGR1Q7Z3B1 354 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 SDHCQ99643 169 aaPredicted RBP5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 SLC39A9Q9NUM3 307 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 WDR83OSQ9Y284 106 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 TIMM9Q9Y5J7 89 aa5.81□□□□□ -1.48
SHKBP1-220ENST00000599716 IGLV5-52A0A0A0MRZ9 124 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 IGHV3-16A0A0C4DH30 117 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 IGSF23A1L1A6 192 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 FAM229AH3BQW9 127 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 CRYGDP07320 174 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 SRIP30626 198 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 S100A5P33763 92 aa5.8□□□□□ -1.48
SHKBP1-220ENST00000599716 INPP1P49441 399 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms