RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 LYRM9A8MSI8 78 aa11.75□□□□□ -0.53
DNMT1-229ENST00000593049 HMSDA8MTL9 139 aa11.75□□□□□ -0.53
DNMT1-229ENST00000593049 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
DNMT1-229ENST00000593049 STAG3L3P0CL85 134 aa11.75□□□□□ -0.53
DNMT1-229ENST00000593049 RAB24Q969Q5 203 aa11.75□□□□□ -0.53
DNMT1-229ENST00000593049 SH3BGRL3Q9H299 93 aa11.75□□□□□ -0.53
DNMT1-229ENST00000593049 IGKV2-40A0A087WW87 121 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-229ENST00000593049 DEFB131BA0A096LNP1 70 aa11.74□□□□□ -0.53
DNMT1-229ENST00000593049 C7orf71A4D174 169 aa11.74□□□□□ -0.53
DNMT1-229ENST00000593049 IGKV2D-40P01614 121 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-229ENST00000593049 ARL14EPLP0DKL9 152 aa11.74□□□□□ -0.53
DNMT1-229ENST00000593049 CRISP2P16562 243 aa11.74□□□□□ -0.53
DNMT1-229ENST00000593049 CCDC28AQ8IWP9 274 aa11.74□□□□□ -0.53
DNMT1-229ENST00000593049 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
DNMT1-229ENST00000593049 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
DNMT1-229ENST00000593049 ARPC5LQ9BPX5 153 aa11.74□□□□□ -0.53
DNMT1-229ENST00000593049 PYGO2Q9BRQ0 406 aa11.74□□□□□ -0.53
DNMT1-229ENST00000593049 A0A0D9SG52 128 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 PGPA6NDG6 321 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 KLLNB2CW77 178 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 IGLL5B9A064 214 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 CXorf1O96002 111 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 ZNF138P52744 262 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 DAD1P61803 113 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 AKR1C8PQ5T2L2 129 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 ZNF767PQ75MW2 155 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 KCNRGQ8N5I3 272 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 TMEM263Q8WUH6 116 aaKnown RBP11.73□□□□□ -0.53
DNMT1-229ENST00000593049 LINC00476Q8WZB0 136 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 TMEM167BQ9NRX6 74 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 ZNF492Q9P255 531 aa11.73□□□□□ -0.53
DNMT1-229ENST00000593049 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
DNMT1-229ENST00000593049 SMLR1H3BR10 107 aa11.72□□□□□ -0.53
DNMT1-229ENST00000593049 J3KRW8 73 aa11.72□□□□□ -0.53
DNMT1-229ENST00000593049 HMGB3O15347 200 aaKnown RBP11.72□□□□□ -0.53
DNMT1-229ENST00000593049 GPX1P07203 203 aa11.72□□□□□ -0.53
DNMT1-229ENST00000593049 HTN1P15515 57 aa11.72□□□□□ -0.53
DNMT1-229ENST00000593049 KIR3DS1Q14943 382 aa11.72□□□□□ -0.53
DNMT1-229ENST00000593049 VGLL1Q99990 258 aa11.72□□□□□ -0.53
DNMT1-229ENST00000593049 TIMM8BQ9Y5J9 83 aaPredicted RBP11.72□□□□□ -0.53
DNMT1-229ENST00000593049 LENEPQ9Y5L5 61 aa11.72□□□□□ -0.53
DNMT1-229ENST00000593049 DIRC3C9JPN6 131 aa11.71□□□□□ -0.53
DNMT1-229ENST00000593049 EIF3GO75821 320 aaKnown RBP eCLIP11.71□□□□□ -0.53
DNMT1-229ENST00000593049 AZU1P20160 251 aa11.71□□□□□ -0.53
DNMT1-229ENST00000593049 GCHFRP30047 84 aa11.71□□□□□ -0.53
DNMT1-229ENST00000593049 SUN5Q8TC36 379 aa11.71□□□□□ -0.53
DNMT1-229ENST00000593049 RNASE8Q8TDE3 154 aaKnown RBP11.71□□□□□ -0.53
DNMT1-229ENST00000593049 TMED6Q8WW62 240 aa11.71□□□□□ -0.53
DNMT1-229ENST00000593049 FAM210BQ96KR6 192 aa11.71□□□□□ -0.53
DNMT1-229ENST00000593049 HYLS1Q96M11 299 aa11.71□□□□□ -0.53
DNMT1-229ENST00000593049 LYSTQ99698 3801 aa11.71□□□□□ -0.53
DNMT1-229ENST00000593049 CYTL1Q9NRR1 136 aa11.71□□□□□ -0.53
DNMT1-229ENST00000593049 DYNC2H1Q8NCM8 4307 aaKnown RBP11.71□□□□□ -0.54
DNMT1-229ENST00000593049 CTXND1A0A1B0GTU2 59 aa11.7□□□□□ -0.54
DNMT1-229ENST00000593049 SERTM2A0A1B0GWG4 89 aa11.7□□□□□ -0.54
DNMT1-229ENST00000593049 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
DNMT1-229ENST00000593049 LY6G6CO95867 125 aa11.7□□□□□ -0.54
DNMT1-229ENST00000593049 PRM2P04554 102 aa11.7□□□□□ -0.54
DNMT1-229ENST00000593049 LGALS9CQ6DKI2 356 aa11.7□□□□□ -0.54
DNMT1-229ENST00000593049 ST6GAL2Q96JF0 529 aa11.7□□□□□ -0.54
DNMT1-229ENST00000593049 LINC00467Q9BRT7 94 aa11.7□□□□□ -0.54
DNMT1-229ENST00000593049 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
DNMT1-229ENST00000593049 PLAC8L1A1L4L8 177 aa11.69□□□□□ -0.54
DNMT1-229ENST00000593049 ZNF324O75467 553 aaPredicted RBP11.69□□□□□ -0.54
DNMT1-229ENST00000593049 RNASE4P34096 147 aaKnown RBP11.69□□□□□ -0.54
DNMT1-229ENST00000593049 EIF5AP63241 154 aaKnown RBP11.69□□□□□ -0.54
DNMT1-229ENST00000593049 ZFAND2AQ8N6M9 145 aa11.69□□□□□ -0.54
DNMT1-229ENST00000593049 ZNF680Q8NEM1 530 aa11.69□□□□□ -0.54
DNMT1-229ENST00000593049 OR11H4Q8NGC9 324 aa11.69□□□□□ -0.54
DNMT1-229ENST00000593049 NDUFAF3Q9BU61 184 aa11.69□□□□□ -0.54
DNMT1-229ENST00000593049 SNURFLB1AK76 121 aa11.68□□□□□ -0.54
DNMT1-229ENST00000593049 K7EQM0 130 aa11.68□□□□□ -0.54
DNMT1-229ENST00000593049 CD300CQ08708 224 aa11.68□□□□□ -0.54
DNMT1-229ENST00000593049 BTN1A1Q13410 526 aa11.68□□□□□ -0.54
DNMT1-229ENST00000593049 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
DNMT1-229ENST00000593049 APLNQ9ULZ1 77 aa11.68□□□□□ -0.54
DNMT1-229ENST00000593049 BCL2L11O43521 198 aa11.67□□□□□ -0.54
DNMT1-229ENST00000593049 ANXA2RQ3ZCQ2 193 aa11.67□□□□□ -0.54
DNMT1-229ENST00000593049 Q6ZNX1 250 aa11.67□□□□□ -0.54
DNMT1-229ENST00000593049 GOLT1AQ6ZVE7 132 aa11.67□□□□□ -0.54
DNMT1-229ENST00000593049 IQCF2Q8IXL9 164 aa11.67□□□□□ -0.54
DNMT1-229ENST00000593049 EIF4E3Q8N5X7 224 aaKnown RBP11.67□□□□□ -0.54
DNMT1-229ENST00000593049 Q8TAT8 98 aa11.67□□□□□ -0.54
DNMT1-229ENST00000593049 RPH3ALQ9UNE2 315 aa11.67□□□□□ -0.54
DNMT1-229ENST00000593049 A0A1W2PRE2 83 aa11.66□□□□□ -0.54
DNMT1-229ENST00000593049 UMAD1C9J7I0 102 aa11.66□□□□□ -0.54
DNMT1-229ENST00000593049 RGS13O14921 159 aa11.66□□□□□ -0.54
DNMT1-229ENST00000593049 PFDN1O60925 122 aa11.66□□□□□ -0.54
DNMT1-229ENST00000593049 SEC11BP0C7V7 166 aa11.66□□□□□ -0.54
DNMT1-229ENST00000593049 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
DNMT1-229ENST00000593049 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
DNMT1-229ENST00000593049 TCTE3Q8IZS6 198 aa11.66□□□□□ -0.54
DNMT1-229ENST00000593049 ZNF471Q9BX82 626 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-229ENST00000593049 NKX6-2Q9C056 277 aaPredicted RBP11.66□□□□□ -0.54
DNMT1-229ENST00000593049 NOP10Q9NPE3 64 aaKnown RBP11.66□□□□□ -0.54
DNMT1-229ENST00000593049 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
DNMT1-229ENST00000593049 FBLL1A6NHQ2 334 aaKnown RBP11.65□□□□□ -0.54
DNMT1-229ENST00000593049 CBY3A6NI87 242 aa11.65□□□□□ -0.54
DNMT1-229ENST00000593049 HTN3P15516 51 aa11.65□□□□□ -0.54
DNMT1-229ENST00000593049 DAZ2Q13117 558 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms