RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PGPA6NDG6 321 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 SMLR1H3BR10 107 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 H7BYZ3 331 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 IGKV2D-40P01614 121 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-227ENST00000591849 SLC25A5P05141 298 aaKnown RBP7.23□□□□□ -1.25
BRCA1-227ENST00000591849 GPX1P07203 203 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 HTN3P15516 51 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 RNASE4P34096 147 aaKnown RBP7.23□□□□□ -1.25
BRCA1-227ENST00000591849 DAD1P61803 113 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 AKR1C8PQ5T2L2 129 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 RAB24Q969Q5 203 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 ODF3Q96PU9 254 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 AGPAT4-IT1Q9H0P7 198 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 OTORQ9NRC9 128 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 STARD9Q9P2P6 4700 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 LYSTQ99698 3801 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 C7orf71A4D174 169 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 PRM2P04554 102 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 TCTAP57738 103 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 GFI1BQ5VTD9 330 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 ZNF493Q6ZR52 646 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 ZNF503Q96F45 646 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 C16orf74Q96GX8 76 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 VGLL1Q99990 258 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 SH3BGRL3Q9H299 93 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 PLA2G2EQ9NZK7 142 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 DKK2Q9UBU2 259 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 BIRC6Q9NR09 4857 aa7.22□□□□□ -1.25
BRCA1-227ENST00000591849 KANTRA0A1W2PQU2 76 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 LYRM9A8MSI8 78 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 CXorf1O96002 111 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 ARL14EPLP0DKL9 152 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 DEFB130BP0DP73 79 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 DEFB130AP0DP74 79 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 AZU1P20160 251 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 ZNF138P52744 262 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 KIR3DS1Q14943 382 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 C9orf47Q6ZRZ4 202 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 ARPC5LQ9BPX5 153 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 TMEM167BQ9NRX6 74 aa7.21□□□□□ -1.26
BRCA1-227ENST00000591849 TIMM8BQ9Y5J9 83 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-227ENST00000591849 A0A0D9SG52 128 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 RBAKDNA6NC62 111 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 SNURFLB1AK76 121 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 RGS13O14921 159 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 PFDN1O60925 122 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 STAG3L2P0CL84 134 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 STAG3L3P0CL85 134 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 GCHFRP30047 84 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 EIF5AP63241 154 aaKnown RBP7.2□□□□□ -1.26
BRCA1-227ENST00000591849 PYGO2Q9BRQ0 406 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
BRCA1-227ENST00000591849 ZNF492Q9P255 531 aa7.2□□□□□ -1.26
BRCA1-227ENST00000591849 DNAH1Q9P2D7 4330 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 IGHV4-4A0A075B6R2 117 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 CBY3A6NI87 242 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 HMSDA8MTL9 139 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 DIRC3C9JPN6 131 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 K7EQM0 130 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 NMBP08949 121 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 CD300CQ08708 224 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 BTN1A1Q13410 526 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 GOLT1AQ6ZVE7 132 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 KCNRGQ8N5I3 272 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 Q8TAT8 98 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 TMEM263Q8WUH6 116 aaKnown RBP7.19□□□□□ -1.26
BRCA1-227ENST00000591849 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 NDUFAF3Q9BU61 184 aa7.19□□□□□ -1.26
BRCA1-227ENST00000591849 ZNF471Q9BX82 626 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-227ENST00000591849 CTXND1A0A1B0GTU2 59 aa7.18□□□□□ -1.26
BRCA1-227ENST00000591849 F5H768 121 aa7.18□□□□□ -1.26
BRCA1-227ENST00000591849 G3V3Q6 166 aa7.18□□□□□ -1.26
BRCA1-227ENST00000591849 CRISP2P16562 243 aa7.18□□□□□ -1.26
BRCA1-227ENST00000591849 SUMO1P63165 101 aaKnown RBP7.18□□□□□ -1.26
BRCA1-227ENST00000591849 EIF4E3Q8N5X7 224 aaKnown RBP7.18□□□□□ -1.26
BRCA1-227ENST00000591849 STOML3Q8TAV4 291 aa7.18□□□□□ -1.26
BRCA1-227ENST00000591849 NDFIP1Q9BT67 221 aa7.18□□□□□ -1.26
BRCA1-227ENST00000591849 TRBV7-9A0A0J9YWB2 115 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 KLLNB2CW77 178 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 IFNA7P01567 189 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 GNG5P63218 68 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 ZNF345Q14585 488 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 LGALS9CQ6DKI2 356 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 Q6ZNX1 250 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 TMUB2Q71RG4 321 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 ARL6IP6Q8N6S5 226 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 C5orf17Q8NAS9 161 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 ZNF680Q8NEM1 530 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 OR11H4Q8NGC9 324 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 ST6GAL2Q96JF0 529 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 FAM210BQ96KR6 192 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 FAM19A4Q96LR4 140 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 CYTL1Q9NRR1 136 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 APLNQ9ULZ1 77 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 LENEPQ9Y5L5 61 aa7.17□□□□□ -1.26
BRCA1-227ENST00000591849 hCG_2014768A0A024R1R8 64 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 IGHV1OR15-1A0A075B7D0 117 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 SERTM2A0A1B0GWG4 89 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 GAGE12BA1L429 117 aa7.16□□□□□ -1.26
BRCA1-227ENST00000591849 BCL2L11O43521 198 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms