RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 IL36BQ9NZH7 164 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 TEX43Q6ZNM6 134 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 C12orf57Q99622 126 aa4.91□□□□□ -1.62
SMAD4-212ENST00000591126 CCL25O15444 150 aa4.9□□□□□ -1.62
SMAD4-212ENST00000591126 RAB37Q96AX2 223 aa4.9□□□□□ -1.62
SMAD4-212ENST00000591126 ZNF492Q9P255 531 aa4.9□□□□□ -1.62
SMAD4-212ENST00000591126 ZNF106Q9H2Y7 1883 aaKnown RBP4.9□□□□□ -1.62
SMAD4-212ENST00000591126 ACACBO00763 2458 aa4.9□□□□□ -1.62
SMAD4-212ENST00000591126 K7EMI3 77 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 PAX9P55771 341 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 CD300EQ496F6 205 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-212ENST00000591126 CT83Q5H943 113 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 GPHA2Q96T91 129 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 AURKAIP1Q9NWT8 199 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-212ENST00000591126 IGLC7A0M8Q6 106 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 H3BTX0 84 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 PLP1P60201 277 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 PMCHL1Q16048 86 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 SPINK13Q1W4C9 94 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 NUP210LQ5VU65 1888 aa4.9□□□□□ -1.63
SMAD4-212ENST00000591126 NCR2O95944 276 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 RPP25LQ8N5L8 163 aaKnown RBP4.89□□□□□ -1.63
SMAD4-212ENST00000591126 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 PARLQ9H300 379 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 ELF5Q9UKW6 265 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-212ENST00000591126 SPTBN1Q01082 2364 aaKnown RBP4.89□□□□□ -1.63
SMAD4-212ENST00000591126 CDK2AP2O75956 126 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 MED14OSP0DP75 135 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 PSMB2P49721 201 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 DAZ2Q13117 558 aaKnown RBP4.89□□□□□ -1.63
SMAD4-212ENST00000591126 KLF5Q13887 457 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-212ENST00000591126 DAZ4Q86SG3 579 aaKnown RBP4.89□□□□□ -1.63
SMAD4-212ENST00000591126 TMEM263Q8WUH6 116 aaKnown RBP4.89□□□□□ -1.63
SMAD4-212ENST00000591126 ZNF702PQ9H963 129 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 DAZ3Q9NR90 486 aaKnown RBP4.89□□□□□ -1.63
SMAD4-212ENST00000591126 TRAV8-3A0A0A6YYJ7 113 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 H3BVH4 76 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 IGLL1P15814 213 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 LRP4O75096 1905 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 ADAMTS20P59510 1910 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 C7orf77A4D0Y5 90 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 C6orf226Q5I0X4 101 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 DUX4L9Q6RFH8 374 aaPredicted RBP4.89□□□□□ -1.63
SMAD4-212ENST00000591126 MGST2Q99735 147 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 FAM110AQ9BQ89 295 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 OVOL2Q9BRP0 275 aa4.89□□□□□ -1.63
SMAD4-212ENST00000591126 A0A087X0K7 114 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 KNCNA6PVL3 124 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 I3L3M4 83 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 SPINK4O60575 86 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 MRPL18Q9H0U6 180 aaKnown RBP4.88□□□□□ -1.63
SMAD4-212ENST00000591126 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
SMAD4-212ENST00000591126 PRO0255Q9UI72 69 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 MMP23AO75900 390 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 DNAL4O96015 105 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 HIST2H2BCQ6DN03 193 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 RNF182Q8N6D2 247 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 OR11H7Q8NGC8 314 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 ATP6V0E2Q8NHE4 81 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 VAMP8Q9BV40 100 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 IGKV1D-8A0A087WSZ0 117 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 IFITM10A6NMD0 228 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 IGLL5B9A064 214 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 H3BMM0 161 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 WT1-ASQ06250 92 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 DEFB114Q30KQ6 69 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 TMEM141Q96I45 108 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 TOMM7Q9P0U1 55 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 TP53TG1Q9Y2A0 90 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 KIF26BQ2KJY2 2108 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 GTF3C1Q12789 2109 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 GRIFINA4D1Z8 144 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 LEPROTL1O95214 131 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 HLA-DRB4P13762 266 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 ZNF124Q15973 351 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 NKAPP1Q8N9T2 125 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 AGMATQ9BSE5 352 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 HLA-DRB4X5D2U9 266 aa4.88□□□□□ -1.63
SMAD4-212ENST00000591126 LAMA2P24043 3122 aaKnown RBP4.87□□□□□ -1.63
SMAD4-212ENST00000591126 IGKV2-40A0A087WW87 121 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-212ENST00000591126 IGKV1-6A0A0C4DH72 117 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 TRBV10-1A0A0K0K1A3 114 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 A6NDN8 102 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 IGKV2D-40P01614 121 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-212ENST00000591126 CXCL1P09341 107 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 C1orf147Q96MC9 270 aaPredicted RBP4.87□□□□□ -1.63
SMAD4-212ENST00000591126 GFI1Q99684 422 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 ZNF407Q9C0G0 2248 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 LOC389332A0A1B0GUA5 103 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 A8MWP6 167 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 PYYP10082 97 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 FXYD7P58549 80 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 RPL24P83731 157 aaKnown RBP4.87□□□□□ -1.63
SMAD4-212ENST00000591126 PAX2Q02962 417 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 LGALS9BQ3B8N2 356 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 PDZD11Q5EBL8 140 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 OR13C6PQ8NH95 151 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 MRPL16Q9NX20 251 aaKnown RBP4.87□□□□□ -1.63
SMAD4-212ENST00000591126 PLXNB3Q9ULL4 1909 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 LRRK1Q38SD2 2015 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms