RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 C17orf112F2Z3M2 114 aa12.01□□□□□ -0.49
RETREG3-210ENST00000590541 SSNA1O43805 119 aa12.01□□□□□ -0.49
RETREG3-210ENST00000590541 SNRPCP09234 159 aaKnown RBP12.01□□□□□ -0.49
RETREG3-210ENST00000590541 LEPP41159 167 aa12.01□□□□□ -0.49
RETREG3-210ENST00000590541 CLINT1Q14677 625 aa12.01□□□□□ -0.49
RETREG3-210ENST00000590541 TTC32Q5I0X7 151 aa12.01□□□□□ -0.49
RETREG3-210ENST00000590541 Q5VSD8 79 aa12.01□□□□□ -0.49
RETREG3-210ENST00000590541 PPP1R1CQ8WVI7 109 aa12.01□□□□□ -0.49
RETREG3-210ENST00000590541 TIMM9Q9Y5J7 89 aa12.01□□□□□ -0.49
RETREG3-210ENST00000590541 TIMM8BQ9Y5J9 83 aaPredicted RBP12.01□□□□□ -0.49
RETREG3-210ENST00000590541 CBY3A6NI87 242 aa12□□□□□ -0.49
RETREG3-210ENST00000590541 NPIPB6E9PJ23 425 aa12□□□□□ -0.49
RETREG3-210ENST00000590541 H0YIZ8 118 aa12□□□□□ -0.49
RETREG3-210ENST00000590541 H3BTX0 84 aa12□□□□□ -0.49
RETREG3-210ENST00000590541 AZU1P20160 251 aa12□□□□□ -0.49
RETREG3-210ENST00000590541 H2BFSP57053 126 aa12□□□□□ -0.49
RETREG3-210ENST00000590541 THAP6Q8TBB0 222 aa12□□□□□ -0.49
RETREG3-210ENST00000590541 TMEM263Q8WUH6 116 aaKnown RBP12□□□□□ -0.49
RETREG3-210ENST00000590541 MRPL32Q9BYC8 188 aaKnown RBP12□□□□□ -0.49
RETREG3-210ENST00000590541 WDR61Q9GZS3 305 aaKnown RBP12□□□□□ -0.49
RETREG3-210ENST00000590541 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
RETREG3-210ENST00000590541 PRAC2D3DTV9 90 aa11.99□□□□□ -0.49
RETREG3-210ENST00000590541 CCDC28AQ8IWP9 274 aa11.99□□□□□ -0.49
RETREG3-210ENST00000590541 VPS13BQ7Z7G8 4022 aa11.98□□□□□ -0.49
RETREG3-210ENST00000590541 A0A1W2PPQ1 181 aa11.98□□□□□ -0.49
RETREG3-210ENST00000590541 MPC2O95563 127 aa11.98□□□□□ -0.49
RETREG3-210ENST00000590541 HTN1P15515 57 aa11.98□□□□□ -0.49
RETREG3-210ENST00000590541 RNASE8Q8TDE3 154 aaKnown RBP11.98□□□□□ -0.49
RETREG3-210ENST00000590541 LINC00477Q96M19 166 aa11.98□□□□□ -0.49
RETREG3-210ENST00000590541 ATP5SQ99766 215 aa11.98□□□□□ -0.49
RETREG3-210ENST00000590541 NDUFB4O95168 129 aa11.97□□□□□ -0.49
RETREG3-210ENST00000590541 SLC25A5P05141 298 aaKnown RBP11.97□□□□□ -0.49
RETREG3-210ENST00000590541 CT45A10P0DMU9 189 aa11.97□□□□□ -0.49
RETREG3-210ENST00000590541 FUSP35637 526 aaKnown RBP eCLIP11.97□□□□□ -0.49
RETREG3-210ENST00000590541 GFI1BQ5VTD9 330 aa11.97□□□□□ -0.49
RETREG3-210ENST00000590541 UPK3BQ9BT76 320 aa11.97□□□□□ -0.49
RETREG3-210ENST00000590541 OR51M1Q9H341 326 aa11.97□□□□□ -0.49
RETREG3-210ENST00000590541 HSPB11Q9Y547 144 aa11.97□□□□□ -0.49
RETREG3-210ENST00000590541 IFNA5P01569 189 aa11.96□□□□□ -0.49
RETREG3-210ENST00000590541 NBEAP1P0C6P0 100 aa11.96□□□□□ -0.49
RETREG3-210ENST00000590541 PYYP10082 97 aa11.96□□□□□ -0.49
RETREG3-210ENST00000590541 GCSAMLQ5JQS6 135 aa11.96□□□□□ -0.49
RETREG3-210ENST00000590541 FRZBQ92765 325 aa11.96□□□□□ -0.49
RETREG3-210ENST00000590541 FAM167A-AS1Q96KT0 104 aa11.96□□□□□ -0.49
RETREG3-210ENST00000590541 PYGO2Q9BRQ0 406 aa11.96□□□□□ -0.49
RETREG3-210ENST00000590541 SLC25A2Q9BXI2 301 aa11.96□□□□□ -0.49
RETREG3-210ENST00000590541 FUT9Q9Y231 359 aa11.96□□□□□ -0.49
RETREG3-210ENST00000590541 NMBP08949 121 aa11.95□□□□□ -0.5
RETREG3-210ENST00000590541 RPL12P30050 165 aaKnown RBP11.95□□□□□ -0.5
RETREG3-210ENST00000590541 Q6ZRN7 208 aaPredicted RBP11.95□□□□□ -0.5
RETREG3-210ENST00000590541 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
RETREG3-210ENST00000590541 BLNKQ8WV28 456 aa11.95□□□□□ -0.5
RETREG3-210ENST00000590541 PARD6GQ9BYG4 376 aaPredicted RBP11.95□□□□□ -0.5
RETREG3-210ENST00000590541 PGPEP1Q9NXJ5 209 aa11.95□□□□□ -0.5
RETREG3-210ENST00000590541 M0R3E3 92 aa11.94□□□□□ -0.5
RETREG3-210ENST00000590541 ESRGQ1W209 222 aa11.94□□□□□ -0.5
RETREG3-210ENST00000590541 C9orf47Q6ZRZ4 202 aa11.94□□□□□ -0.5
RETREG3-210ENST00000590541 MIR17HGQ75NE6 70 aa11.94□□□□□ -0.5
RETREG3-210ENST00000590541 PAXXQ9BUH6 204 aa11.94□□□□□ -0.5
RETREG3-210ENST00000590541 NOP10Q9NPE3 64 aaKnown RBP11.94□□□□□ -0.5
RETREG3-210ENST00000590541 SNURFLB1AK76 121 aa11.93□□□□□ -0.5
RETREG3-210ENST00000590541 PRB4P10163 310 aaPredicted RBP11.93□□□□□ -0.5
RETREG3-210ENST00000590541 LINC00315P59091 139 aa11.93□□□□□ -0.5
RETREG3-210ENST00000590541 TAS2R45P59539 299 aa11.93□□□□□ -0.5
RETREG3-210ENST00000590541 ICAM4Q14773 271 aa11.93□□□□□ -0.5
RETREG3-210ENST00000590541 KIR3DS1Q14943 382 aa11.93□□□□□ -0.5
RETREG3-210ENST00000590541 TMEM78Q5T7P6 136 aa11.93□□□□□ -0.5
RETREG3-210ENST00000590541 RXFP4Q8TDU9 374 aa11.93□□□□□ -0.5
RETREG3-210ENST00000590541 GNPNAT1Q96EK6 184 aaPredicted RBP11.93□□□□□ -0.5
RETREG3-210ENST00000590541 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
RETREG3-210ENST00000590541 LINC00467Q9BRT7 94 aa11.93□□□□□ -0.5
RETREG3-210ENST00000590541 MRPS16Q9Y3D3 137 aaKnown RBP11.93□□□□□ -0.5
RETREG3-210ENST00000590541 FLG2Q5D862 2391 aaPredicted RBP11.93□□□□□ -0.5
RETREG3-210ENST00000590541 TRAV26-1A0A087WT03 109 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 TRAV12-3A0A0B4J271 114 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 TRBV7-9A0A0J9YWB2 115 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 C7orf71A4D174 169 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 KLLNB2CW77 178 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 PTTG1O95997 202 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 CRISP2P16562 243 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 OR5I1Q13606 314 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 EXOC3-AS1Q8N2X6 119 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 LINC00612Q8N6U2 182 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 ZNF503Q96F45 646 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 FAM19A4Q96LR4 140 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 AGPAT4-IT1Q9H0P7 198 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 MBD2Q9UBB5 411 aa11.92□□□□□ -0.5
RETREG3-210ENST00000590541 A0A0J9YY99 117 aa11.91□□□□□ -0.5
RETREG3-210ENST00000590541 J3KRW8 73 aa11.91□□□□□ -0.5
RETREG3-210ENST00000590541 OR7C2O60412 319 aa11.91□□□□□ -0.5
RETREG3-210ENST00000590541 CSN1S1P47710 185 aa11.91□□□□□ -0.5
RETREG3-210ENST00000590541 DAZ2Q13117 558 aaKnown RBP11.91□□□□□ -0.5
RETREG3-210ENST00000590541 KHDC3LQ587J8 217 aa11.91□□□□□ -0.5
RETREG3-210ENST00000590541 FFAR4Q5NUL3 377 aa11.91□□□□□ -0.5
RETREG3-210ENST00000590541 ZNF680Q8NEM1 530 aa11.91□□□□□ -0.5
RETREG3-210ENST00000590541 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
RETREG3-210ENST00000590541 MDFICQ9P1T7 246 aa11.91□□□□□ -0.5
RETREG3-210ENST00000590541 RBAKDNA6NC62 111 aa11.9□□□□□ -0.5
RETREG3-210ENST00000590541 GPX1P07203 203 aa11.9□□□□□ -0.5
RETREG3-210ENST00000590541 M6PRP20645 277 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms