RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 GAGE7O76087 117 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 MPC2O95563 127 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 GAGE12FP0CL80 117 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 GAGE12GP0CL81 117 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 GAGE12IP0CL82 117 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 CT45A10P0DMU9 189 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 HOXA5P20719 270 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 CCDC28AQ8IWP9 274 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 GNPNAT1Q96EK6 184 aaPredicted RBP11.32□□□□□ -0.6
MBD3-206ENST00000589901 Q9H8V8 135 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 TIMM9Q9Y5J7 89 aa11.32□□□□□ -0.6
MBD3-206ENST00000589901 RPL12P30050 165 aaKnown RBP11.31□□□□□ -0.6
MBD3-206ENST00000589901 ATP5SQ99766 215 aa11.31□□□□□ -0.6
MBD3-206ENST00000589901 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
MBD3-206ENST00000589901 MED28Q9H204 178 aa11.31□□□□□ -0.6
MBD3-206ENST00000589901 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
MBD3-206ENST00000589901 APOBP04114 4563 aaKnown RBP11.3□□□□□ -0.6
MBD3-206ENST00000589901 TRAV12-3A0A0B4J271 114 aa11.3□□□□□ -0.6
MBD3-206ENST00000589901 M6PRP20645 277 aa11.3□□□□□ -0.6
MBD3-206ENST00000589901 RXFP4Q8TDU9 374 aa11.3□□□□□ -0.6
MBD3-206ENST00000589901 WDR61Q9GZS3 305 aaKnown RBP11.3□□□□□ -0.6
MBD3-206ENST00000589901 AAMDCQ9H7C9 122 aa11.3□□□□□ -0.6
MBD3-206ENST00000589901 ALG5Q9Y673 324 aa11.3□□□□□ -0.6
MBD3-206ENST00000589901 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
MBD3-206ENST00000589901 NPIPB6E9PJ23 425 aa11.29□□□□□ -0.6
MBD3-206ENST00000589901 ZNF253O75346 499 aa11.29□□□□□ -0.6
MBD3-206ENST00000589901 CDK2AP2O75956 126 aa11.29□□□□□ -0.6
MBD3-206ENST00000589901 MRPL32Q9BYC8 188 aaKnown RBP11.29□□□□□ -0.6
MBD3-206ENST00000589901 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
MBD3-206ENST00000589901 TMEM14CQ9P0S9 112 aa11.29□□□□□ -0.6
MBD3-206ENST00000589901 MBD2Q9UBB5 411 aa11.29□□□□□ -0.6
MBD3-206ENST00000589901 HSPB11Q9Y547 144 aa11.29□□□□□ -0.6
MBD3-206ENST00000589901 H0YIZ8 118 aa11.28□□□□□ -0.6
MBD3-206ENST00000589901 HIST1H1EP10412 219 aaKnown RBP11.28□□□□□ -0.6
MBD3-206ENST00000589901 LEPP41159 167 aa11.28□□□□□ -0.6
MBD3-206ENST00000589901 ESRGQ1W209 222 aa11.28□□□□□ -0.6
MBD3-206ENST00000589901 ASB13Q8WXK3 278 aa11.28□□□□□ -0.6
MBD3-206ENST00000589901 ZNF503Q96F45 646 aa11.28□□□□□ -0.6
MBD3-206ENST00000589901 PRELID1Q9Y255 219 aa11.28□□□□□ -0.6
MBD3-206ENST00000589901 TAS2R45P59539 299 aa11.27□□□□□ -0.61
MBD3-206ENST00000589901 PDE6HQ13956 83 aa11.27□□□□□ -0.61
MBD3-206ENST00000589901 RGS21Q2M5E4 152 aa11.27□□□□□ -0.61
MBD3-206ENST00000589901 Q6ZTI0 123 aa11.27□□□□□ -0.61
MBD3-206ENST00000589901 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.61
MBD3-206ENST00000589901 ODF3Q96PU9 254 aa11.27□□□□□ -0.61
MBD3-206ENST00000589901 SMIM3Q9BZL3 60 aa11.27□□□□□ -0.61
MBD3-206ENST00000589901 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
MBD3-206ENST00000589901 M0R3E3 92 aa11.26□□□□□ -0.61
MBD3-206ENST00000589901 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
MBD3-206ENST00000589901 ERCC8Q13216 396 aa11.26□□□□□ -0.61
MBD3-206ENST00000589901 SPATA12Q7Z6I5 190 aa11.26□□□□□ -0.61
MBD3-206ENST00000589901 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
MBD3-206ENST00000589901 PYGO2Q9BRQ0 406 aa11.26□□□□□ -0.61
MBD3-206ENST00000589901 Q9H3A6 140 aa11.26□□□□□ -0.61
MBD3-206ENST00000589901 TRBV19A0A075B6N1 114 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 H3BNG1 76 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 OR7C2O60412 319 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 ZNF266Q14584 549 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 TTC32Q5I0X7 151 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 FFAR4Q5NUL3 377 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 BLNKQ8WV28 456 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 UPK3BQ9BT76 320 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 OR51M1Q9H341 326 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
MBD3-206ENST00000589901 NDUFB4O95168 129 aa11.24□□□□□ -0.61
MBD3-206ENST00000589901 VSIG2Q96IQ7 327 aa11.24□□□□□ -0.61
MBD3-206ENST00000589901 PAXXQ9BUH6 204 aa11.24□□□□□ -0.61
MBD3-206ENST00000589901 GSN-AS1Q9NRJ2 163 aa11.24□□□□□ -0.61
MBD3-206ENST00000589901 MRPS16Q9Y3D3 137 aaKnown RBP11.24□□□□□ -0.61
MBD3-206ENST00000589901 A0A1W2PPV4 95 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 C7orf71A4D174 169 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 ZNF324O75467 553 aaPredicted RBP11.23□□□□□ -0.61
MBD3-206ENST00000589901 SLC25A5P05141 298 aaKnown RBP11.23□□□□□ -0.61
MBD3-206ENST00000589901 PYYP10082 97 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 CSN1S1P47710 185 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 KRTAP10-2P60368 255 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 CD300CQ08708 224 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 BTN1A1Q13410 526 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 ACOT6Q3I5F7 207 aaPredicted RBP11.23□□□□□ -0.61
MBD3-206ENST00000589901 KHDC3LQ587J8 217 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 GCSAMLQ5JQS6 135 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 MIR17HGQ75NE6 70 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 C11orf72Q8NBR9 251 aa11.23□□□□□ -0.61
MBD3-206ENST00000589901 INO80EQ8NBZ0 244 aaPredicted RBP11.23□□□□□ -0.61
MBD3-206ENST00000589901 TRGV2A0A075B6R0 118 aa11.22□□□□□ -0.61
MBD3-206ENST00000589901 A0A096LPF7 62 aa11.22□□□□□ -0.61
MBD3-206ENST00000589901 KLLNB2CW77 178 aa11.22□□□□□ -0.61
MBD3-206ENST00000589901 GIPP09681 153 aaPredicted RBP11.22□□□□□ -0.61
MBD3-206ENST00000589901 NBEAP1P0C6P0 100 aa11.22□□□□□ -0.61
MBD3-206ENST00000589901 EXOC3-AS1Q8N2X6 119 aa11.22□□□□□ -0.61
MBD3-206ENST00000589901 FAM19A4Q96LR4 140 aa11.22□□□□□ -0.61
MBD3-206ENST00000589901 SLC25A2Q9BXI2 301 aa11.22□□□□□ -0.61
MBD3-206ENST00000589901 AGPAT4-IT1Q9H0P7 198 aa11.22□□□□□ -0.61
MBD3-206ENST00000589901 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
MBD3-206ENST00000589901 A0A1W2PPQ1 181 aa11.21□□□□□ -0.61
MBD3-206ENST00000589901 RNASE4P34096 147 aaKnown RBP11.21□□□□□ -0.61
MBD3-206ENST00000589901 UBE2L3P68036 154 aaKnown RBP11.21□□□□□ -0.61
MBD3-206ENST00000589901 FAM74A1Q5RGS3 127 aa11.21□□□□□ -0.61
MBD3-206ENST00000589901 TMEM78Q5T7P6 136 aa11.21□□□□□ -0.61
MBD3-206ENST00000589901 ZNF680Q8NEM1 530 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms