RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ANKRD39Q53RE8 183 aa13.1□□□□□ -0.31
PRKCSH-205ENST00000587327 OR1N2Q8NGR9 330 aa13.1□□□□□ -0.31
PRKCSH-205ENST00000587327 FXYD7P58549 80 aa13.09□□□□□ -0.31
PRKCSH-205ENST00000587327 DTX2Q86UW9 622 aa13.09□□□□□ -0.31
PRKCSH-205ENST00000587327 IGHV7-81A0A0B4J1V7 117 aa13.08□□□□□ -0.31
PRKCSH-205ENST00000587327 NPYP01303 97 aa13.08□□□□□ -0.31
PRKCSH-205ENST00000587327 HLA-DMBP28068 263 aa13.08□□□□□ -0.31
PRKCSH-205ENST00000587327 PCP4P48539 62 aa13.08□□□□□ -0.31
PRKCSH-205ENST00000587327 SRSF2Q01130 221 aaKnown RBP13.08□□□□□ -0.31
PRKCSH-205ENST00000587327 AMMECR1LQ6DCA0 310 aa13.08□□□□□ -0.31
PRKCSH-205ENST00000587327 SPTBN1Q01082 2364 aaKnown RBP13.08□□□□□ -0.32
PRKCSH-205ENST00000587327 SMKR1H3BMG3 65 aa13.08□□□□□ -0.32
PRKCSH-205ENST00000587327 TMEM11P17152 192 aa13.08□□□□□ -0.32
PRKCSH-205ENST00000587327 CACNG7P62955 275 aa13.08□□□□□ -0.32
PRKCSH-205ENST00000587327 TMEM97Q5BJF2 176 aa13.08□□□□□ -0.32
PRKCSH-205ENST00000587327 MINOS1Q5TGZ0 78 aa13.08□□□□□ -0.32
PRKCSH-205ENST00000587327 MINOS1-NBL1R4GNA1 71 aa13.08□□□□□ -0.32
PRKCSH-205ENST00000587327 S100A7P31151 101 aa13.07□□□□□ -0.32
PRKCSH-205ENST00000587327 IFI27L1Q96BM0 104 aa13.07□□□□□ -0.32
PRKCSH-205ENST00000587327 IGHV3OR16-8A0A075B7F1 116 aa13.07□□□□□ -0.32
PRKCSH-205ENST00000587327 SEC11AP67812 179 aa13.07□□□□□ -0.32
PRKCSH-205ENST00000587327 BOD1L2Q8IYS8 172 aa13.07□□□□□ -0.32
PRKCSH-205ENST00000587327 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
PRKCSH-205ENST00000587327 CNFNQ9BYD5 112 aa13.07□□□□□ -0.32
PRKCSH-205ENST00000587327 IGHV3-35A0A0C4DH35 117 aa13.06□□□□□ -0.32
PRKCSH-205ENST00000587327 FABP5P3A8MUU1 101 aa13.06□□□□□ -0.32
PRKCSH-205ENST00000587327 ORM1P02763 201 aa13.06□□□□□ -0.32
PRKCSH-205ENST00000587327 NPFFR1Q9GZQ6 430 aa13.06□□□□□ -0.32
PRKCSH-205ENST00000587327 MSRB1Q9NZV6 116 aa13.06□□□□□ -0.32
PRKCSH-205ENST00000587327 C7orf71A4D174 169 aa13.05□□□□□ -0.32
PRKCSH-205ENST00000587327 CDKN1BP46527 198 aa13.05□□□□□ -0.32
PRKCSH-205ENST00000587327 RNF185Q96GF1 192 aa13.05□□□□□ -0.32
PRKCSH-205ENST00000587327 PEF1Q9UBV8 284 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-205ENST00000587327 UQCRFS1P47985 274 aa13.05□□□□□ -0.32
PRKCSH-205ENST00000587327 PRSS57Q6UWY2 283 aa13.05□□□□□ -0.32
PRKCSH-205ENST00000587327 Q8N9W7 124 aa13.05□□□□□ -0.32
PRKCSH-205ENST00000587327 TRAV8-6A0A0B4J262 113 aa13.04□□□□□ -0.32
PRKCSH-205ENST00000587327 NDUFS7O75251 213 aa13.04□□□□□ -0.32
PRKCSH-205ENST00000587327 PPBPP02775 128 aa13.04□□□□□ -0.32
PRKCSH-205ENST00000587327 ZFP36P26651 326 aaKnown RBP13.04□□□□□ -0.32
PRKCSH-205ENST00000587327 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
PRKCSH-205ENST00000587327 SVEP1Q4LDE5 3571 aa13.04□□□□□ -0.32
PRKCSH-205ENST00000587327 ERCC8Q13216 396 aa13.04□□□□□ -0.32
PRKCSH-205ENST00000587327 ZNF502Q8TBZ5 544 aa13.04□□□□□ -0.32
PRKCSH-205ENST00000587327 WNK2Q9Y3S1 2297 aa13.04□□□□□ -0.32
PRKCSH-205ENST00000587327 LINC01546A6NGU7 62 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 PRAC2D3DTV9 90 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 BUB3O43684 328 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 RAB9AP51151 201 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 ITLN2Q8WWU7 325 aaPredicted RBP13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 MAP1LC3AQ9H492 121 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 SMAD7O15105 426 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 CLEC3BP05452 202 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 C21orf62-AS1Q17RA5 79 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 LINC01559Q495D7 138 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 OR9G4Q8NGQ1 327 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 FAM110DQ8TAY7 271 aaPredicted RBP13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 ZFAND3Q9H8U3 227 aa13.03□□□□□ -0.32
PRKCSH-205ENST00000587327 RBAKDNA6NC62 111 aa13.02□□□□□ -0.33
PRKCSH-205ENST00000587327 SIVA1O15304 175 aa13.02□□□□□ -0.33
PRKCSH-205ENST00000587327 CST9LQ9H4G1 147 aa13.02□□□□□ -0.33
PRKCSH-205ENST00000587327 ASH1LQ9NR48 2969 aaKnown RBP13.02□□□□□ -0.33
PRKCSH-205ENST00000587327 A1L4Q6 167 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 TCTAP57738 103 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 KLK9Q2XQG4 91 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 SIRPDQ9H106 197 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 KLK9Q9UKQ9 250 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 RNF182Q8N6D2 247 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 UBTD1Q9HAC8 227 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 DKK2Q9UBU2 259 aa13.01□□□□□ -0.33
PRKCSH-205ENST00000587327 C19orf84I3L1E1 186 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 GNLYP22749 145 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 ADAMTSL5Q6ZMM2 481 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 IL17RELQ6ZVW7 336 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 WFDC3Q8IUB2 231 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 A6NDN8 102 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 GOSR1O95249 250 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 TNFRSF6BO95407 300 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 HSD52Q0P140 79 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 ECSCRQ19T08 205 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 C18orf15Q96N68 181 aa13□□□□□ -0.33
PRKCSH-205ENST00000587327 NXT2Q9NPJ8 142 aaKnown RBP13□□□□□ -0.33
PRKCSH-205ENST00000587327 PKD1L2Q7Z442 2459 aa12.99□□□□□ -0.33
PRKCSH-205ENST00000587327 GAGE12BA1L429 117 aa12.99□□□□□ -0.33
PRKCSH-205ENST00000587327 CLPSL1A2RUU4 121 aa12.99□□□□□ -0.33
PRKCSH-205ENST00000587327 FCER1GP30273 86 aa12.99□□□□□ -0.33
PRKCSH-205ENST00000587327 LEPP41159 167 aa12.99□□□□□ -0.33
PRKCSH-205ENST00000587327 AJUBAQ96IF1 538 aa12.99□□□□□ -0.33
PRKCSH-205ENST00000587327 SLC50A1Q9BRV3 221 aa12.99□□□□□ -0.33
PRKCSH-205ENST00000587327 H3BRM9 83 aa12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 ATP6V0E1O15342 81 aa12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 PPIFP30405 207 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 NMUP48645 174 aa12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 OCIAD2Q56VL3 154 aa12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 PCP2Q8IVA1 136 aa12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 OR4X2Q8NGF9 303 aa12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 IGKV3D-20A0A0C4DH25 116 aa12.98□□□□□ -0.33
PRKCSH-205ENST00000587327 IGHV3-66A0A0C4DH42 116 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms