RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 ATP6V0CP27449 155 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 RAB2AP61019 212 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 RANP62826 216 aaKnown RBP9.93□□□□□ -0.82
GGA3-215ENST00000582821 UBE2L3P68036 154 aaKnown RBP9.93□□□□□ -0.82
GGA3-215ENST00000582821 ERCC8Q13216 396 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 FAM122CQ6P4D5 195 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 HSD17B11Q8NBQ5 300 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 OR10G9Q8NGN4 311 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 OR10G7Q8NGN6 311 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 C16orf74Q96GX8 76 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 FAM210BQ96KR6 192 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 PLA2G2EQ9NZK7 142 aa9.93□□□□□ -0.82
GGA3-215ENST00000582821 RBAKDNA6NC62 111 aa9.92□□□□□ -0.82
GGA3-215ENST00000582821 ARL6IP6Q8N6S5 226 aa9.92□□□□□ -0.82
GGA3-215ENST00000582821 RNASE8Q8TDE3 154 aaKnown RBP9.92□□□□□ -0.82
GGA3-215ENST00000582821 RXFP4Q8TDU9 374 aa9.92□□□□□ -0.82
GGA3-215ENST00000582821 TMEM263Q8WUH6 116 aaKnown RBP9.92□□□□□ -0.82
GGA3-215ENST00000582821 VGLL1Q99990 258 aa9.92□□□□□ -0.82
GGA3-215ENST00000582821 Q9H3A6 140 aa9.92□□□□□ -0.82
GGA3-215ENST00000582821 ZNF492Q9P255 531 aa9.92□□□□□ -0.82
GGA3-215ENST00000582821 ZNF324O75467 553 aaPredicted RBP9.91□□□□□ -0.82
GGA3-215ENST00000582821 CSN1S1P47710 185 aa9.91□□□□□ -0.82
GGA3-215ENST00000582821 DAD1P61803 113 aa9.91□□□□□ -0.82
GGA3-215ENST00000582821 TMEM78Q5T7P6 136 aa9.91□□□□□ -0.82
GGA3-215ENST00000582821 CCDC28AQ8IWP9 274 aa9.91□□□□□ -0.82
GGA3-215ENST00000582821 GNPNAT1Q96EK6 184 aaPredicted RBP9.91□□□□□ -0.82
GGA3-215ENST00000582821 PYGO2Q9BRQ0 406 aa9.91□□□□□ -0.82
GGA3-215ENST00000582821 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
GGA3-215ENST00000582821 OTORQ9NRC9 128 aa9.91□□□□□ -0.82
GGA3-215ENST00000582821 TIMM8BQ9Y5J9 83 aaPredicted RBP9.91□□□□□ -0.82
GGA3-215ENST00000582821 IGKV2-40A0A087WW87 121 aaPredicted RBP9.9□□□□□ -0.82
GGA3-215ENST00000582821 BORCS7-ASMTA0A0B4J1R7 106 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 TRAV12-3A0A0B4J271 114 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 C7orf71A4D174 169 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 TAAR5O14804 337 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 IGKV2D-40P01614 121 aaPredicted RBP9.9□□□□□ -0.82
GGA3-215ENST00000582821 STAG3L2P0CL84 134 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 STAG3L3P0CL85 134 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 HTN1P15515 57 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 CDC34P49427 236 aaPredicted RBP9.9□□□□□ -0.82
GGA3-215ENST00000582821 RPL7L1Q6DKI1 246 aaKnown RBP9.9□□□□□ -0.82
GGA3-215ENST00000582821 ZFAND2AQ8N6M9 145 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 SUN5Q8TC36 379 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 NDUFAF3Q9BU61 184 aa9.9□□□□□ -0.82
GGA3-215ENST00000582821 DIRC3C9JPN6 131 aa9.89□□□□□ -0.83
GGA3-215ENST00000582821 J3KRW8 73 aa9.89□□□□□ -0.83
GGA3-215ENST00000582821 EIF3GO75821 320 aaKnown RBP eCLIP9.89□□□□□ -0.83
GGA3-215ENST00000582821 GPX1P07203 203 aa9.89□□□□□ -0.83
GGA3-215ENST00000582821 ZNF138P52744 262 aa9.89□□□□□ -0.83
GGA3-215ENST00000582821 FAM74A1Q5RGS3 127 aa9.89□□□□□ -0.83
GGA3-215ENST00000582821 TMED6Q8WW62 240 aa9.89□□□□□ -0.83
GGA3-215ENST00000582821 RAB24Q969Q5 203 aa9.89□□□□□ -0.83
GGA3-215ENST00000582821 SH3BGRL3Q9H299 93 aa9.89□□□□□ -0.83
GGA3-215ENST00000582821 PGPA6NDG6 321 aa9.88□□□□□ -0.83
GGA3-215ENST00000582821 CBY3A6NI87 242 aa9.88□□□□□ -0.83
GGA3-215ENST00000582821 CD300CQ08708 224 aa9.88□□□□□ -0.83
GGA3-215ENST00000582821 ANXA2RQ3ZCQ2 193 aa9.88□□□□□ -0.83
GGA3-215ENST00000582821 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
GGA3-215ENST00000582821 LENEPQ9Y5L5 61 aa9.88□□□□□ -0.83
GGA3-215ENST00000582821 DNAH6Q9C0G6 4158 aa9.88□□□□□ -0.83
GGA3-215ENST00000582821 ARPC5O15511 151 aa9.87□□□□□ -0.83
GGA3-215ENST00000582821 ARL14EPLP0DKL9 152 aa9.87□□□□□ -0.83
GGA3-215ENST00000582821 RNASE4P34096 147 aaKnown RBP9.87□□□□□ -0.83
GGA3-215ENST00000582821 BTN1A1Q13410 526 aa9.87□□□□□ -0.83
GGA3-215ENST00000582821 ACTR3CQ9C0K3 210 aaPredicted RBP9.87□□□□□ -0.83
GGA3-215ENST00000582821 NOP10Q9NPE3 64 aaKnown RBP9.87□□□□□ -0.83
GGA3-215ENST00000582821 CYTL1Q9NRR1 136 aa9.87□□□□□ -0.83
GGA3-215ENST00000582821 HMSDA8MTL9 139 aa9.86□□□□□ -0.83
GGA3-215ENST00000582821 HMGB3O15347 200 aaKnown RBP9.86□□□□□ -0.83
GGA3-215ENST00000582821 DEFB130BP0DP73 79 aa9.86□□□□□ -0.83
GGA3-215ENST00000582821 DEFB130AP0DP74 79 aa9.86□□□□□ -0.83
GGA3-215ENST00000582821 GCHFRP30047 84 aa9.86□□□□□ -0.83
GGA3-215ENST00000582821 DAZ2Q13117 558 aaKnown RBP9.86□□□□□ -0.83
GGA3-215ENST00000582821 ZNF345Q14585 488 aa9.86□□□□□ -0.83
GGA3-215ENST00000582821 EIF4E3Q8N5X7 224 aaKnown RBP9.86□□□□□ -0.83
GGA3-215ENST00000582821 CMTM2Q8TAZ6 248 aa9.86□□□□□ -0.83
GGA3-215ENST00000582821 ST6GAL2Q96JF0 529 aa9.86□□□□□ -0.83
GGA3-215ENST00000582821 SNURFLB1AK76 121 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 CXorf1O96002 111 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 ATP5G1P05496 136 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 P0DMU3 169 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 HTN3P15516 51 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 ATP5G3P48201 142 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 PRR9Q5T870 116 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 KCNRGQ8N5I3 272 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 ZNF680Q8NEM1 530 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 HYLS1Q96M11 299 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 TMEM167BQ9NRX6 74 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 MUC4Q99102 2169 aa9.85□□□□□ -0.83
GGA3-215ENST00000582821 IGHV1OR15-1A0A075B7D0 117 aa9.84□□□□□ -0.83
GGA3-215ENST00000582821 SERTM2A0A1B0GWG4 89 aa9.84□□□□□ -0.83
GGA3-215ENST00000582821 SMLR1H3BR10 107 aa9.84□□□□□ -0.83
GGA3-215ENST00000582821 Q6AWC8 147 aa9.84□□□□□ -0.83
GGA3-215ENST00000582821 C11orf72Q8NBR9 251 aa9.84□□□□□ -0.83
GGA3-215ENST00000582821 OR11H4Q8NGC9 324 aa9.84□□□□□ -0.83
GGA3-215ENST00000582821 Q8TAT8 98 aa9.84□□□□□ -0.83
GGA3-215ENST00000582821 CTXND1A0A1B0GTU2 59 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms