RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 GCGP01275 180 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 LTAP01374 205 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 IGKV2D-40P01614 121 aaPredicted RBP9.48□□□□□ -0.89
SRSF1-204ENST00000581979 PF4P02776 101 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 IGLL1P15814 213 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 ERVFC1-1P60608 527 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 FLI1Q01543 452 aaPredicted RBP9.48□□□□□ -0.89
SRSF1-204ENST00000581979 C15orf54Q8N8G6 183 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 OR10G8Q8NGN5 311 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 DLX4Q92988 240 aaPredicted RBP9.48□□□□□ -0.89
SRSF1-204ENST00000581979 SMIM12Q96EX1 92 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 CCL24O00175 119 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 IGLV2-11P01706 119 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 FOLR2P14207 255 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 OR9G4Q8NGQ1 327 aa9.48□□□□□ -0.89
SRSF1-204ENST00000581979 MRPL53Q96EL3 112 aaKnown RBP9.48□□□□□ -0.89
SRSF1-204ENST00000581979 DNAH3Q8TD57 4116 aa9.47□□□□□ -0.89
SRSF1-204ENST00000581979 SOCS3O14543 225 aa9.47□□□□□ -0.89
SRSF1-204ENST00000581979 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
SRSF1-204ENST00000581979 GBGT1Q8N5D6 347 aa9.47□□□□□ -0.89
SRSF1-204ENST00000581979 LINC00482Q8N8I6 264 aa9.47□□□□□ -0.89
SRSF1-204ENST00000581979 ZNF738Q8NE65 137 aa9.47□□□□□ -0.89
SRSF1-204ENST00000581979 URGCP-MRPS24S4R325 110 aa9.47□□□□□ -0.89
SRSF1-204ENST00000581979 FBLL1A6NHQ2 334 aaKnown RBP9.46□□□□□ -0.89
SRSF1-204ENST00000581979 PRAC2D3DTV9 90 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 FHL3Q13643 280 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 IBA57Q5T440 356 aaKnown RBP9.46□□□□□ -0.89
SRSF1-204ENST00000581979 SAMD13Q5VXD3 122 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 WFDC3Q8IUB2 231 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 TMEM183AQ8IXX5 376 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 FAM24BQ8N5W8 94 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 MRAPQ8TCY5 172 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 RNASE7Q9H1E1 156 aaKnown RBP9.46□□□□□ -0.89
SRSF1-204ENST00000581979 BIN3Q9NQY0 253 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 MLXQ9UH92 298 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 ZFP30Q9Y2G7 519 aa9.46□□□□□ -0.89
SRSF1-204ENST00000581979 S100PP25815 95 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 ID1P41134 155 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 C20orf173Q96LM9 149 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 ASCL2Q99929 193 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 VGLL1Q99990 258 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 MLST8Q9BVC4 326 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 OSTCQ9NRP0 149 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 RBAKDNA6NC62 111 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 COLCA2A8K830 154 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 TFPI2P48307 235 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 ERCC8Q13216 396 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 ADAMTSL5Q6ZMM2 481 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 DYNLRB2Q8TF09 96 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 MS4A6AQ9H2W1 248 aa9.45□□□□□ -0.9
SRSF1-204ENST00000581979 OVOL1O14753 267 aa9.44□□□□□ -0.9
SRSF1-204ENST00000581979 CSN3P07498 182 aa9.44□□□□□ -0.9
SRSF1-204ENST00000581979 PAFAH1B2P68402 229 aa9.44□□□□□ -0.9
SRSF1-204ENST00000581979 EGFEM1PQ0D2K5 195 aa9.44□□□□□ -0.9
SRSF1-204ENST00000581979 ELOBQ15370 118 aa9.44□□□□□ -0.9
SRSF1-204ENST00000581979 KCNIP4Q6PIL6 250 aa9.44□□□□□ -0.9
SRSF1-204ENST00000581979 FAM231DQ6ZW35 169 aa9.44□□□□□ -0.9
SRSF1-204ENST00000581979 ZNF705GA8MUZ8 300 aaPredicted RBP9.43□□□□□ -0.9
SRSF1-204ENST00000581979 GATCO43716 136 aaKnown RBP9.43□□□□□ -0.9
SRSF1-204ENST00000581979 SAPCD1Q5SSQ6 148 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 NUDT10Q8NFP7 164 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 Q8TAT8 98 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 DAZAP1Q96EP5 407 aaKnown RBP9.43□□□□□ -0.9
SRSF1-204ENST00000581979 NUDT11Q96G61 164 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 C8orf49Q96NF6 230 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 YPEL4Q96NS1 127 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 NDFIP1Q9BT67 221 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 GPR61Q9BZJ8 451 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 ZNF492Q9P255 531 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 TMA7Q9Y2S6 64 aaKnown RBP9.43□□□□□ -0.9
SRSF1-204ENST00000581979 V9GYV3 84 aa9.43□□□□□ -0.9
SRSF1-204ENST00000581979 TGIF2-C20orf24A0A0A6YYL0 155 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 PFN1P07737 140 aaKnown RBP9.42□□□□□ -0.9
SRSF1-204ENST00000581979 KRTAP10-11P60412 298 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
SRSF1-204ENST00000581979 OR10J6PQ8NGY7 276 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 ZC2HC1AQ96GY0 325 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 IL36BQ9NZH7 164 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 K7EIL1 84 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 K7EQG2 157 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 CXCL1P09341 107 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 SNRPD3P62318 126 aaKnown RBP9.42□□□□□ -0.9
SRSF1-204ENST00000581979 PRR25Q96S07 402 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 MCRIP2Q9BUT9 160 aaKnown RBP9.42□□□□□ -0.9
SRSF1-204ENST00000581979 AGPAT4-IT1Q9H0P7 198 aa9.42□□□□□ -0.9
SRSF1-204ENST00000581979 A0A1W2PPQ1 181 aa9.41□□□□□ -0.9
SRSF1-204ENST00000581979 P01737 135 aa9.41□□□□□ -0.9
SRSF1-204ENST00000581979 ZNF705DP0CH99 300 aaPredicted RBP9.41□□□□□ -0.9
SRSF1-204ENST00000581979 ZNF705BP0CI00 300 aaPredicted RBP9.41□□□□□ -0.9
SRSF1-204ENST00000581979 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
SRSF1-204ENST00000581979 LINC00322Q6ZN03 302 aaPredicted RBP9.41□□□□□ -0.9
SRSF1-204ENST00000581979 C9orf47Q6ZRZ4 202 aa9.41□□□□□ -0.9
SRSF1-204ENST00000581979 C19orf71A6NCJ1 209 aa9.4□□□□□ -0.9
SRSF1-204ENST00000581979 ZNF688P0C7X2 276 aa9.4□□□□□ -0.9
SRSF1-204ENST00000581979 RAB5AP20339 215 aa9.4□□□□□ -0.9
SRSF1-204ENST00000581979 ZNF138P52744 262 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms