RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 OTORQ9NRC9 128 aa15.62■□□□□ 0.09
SMG8-203ENST00000578922 P01737 135 aa15.61■□□□□ 0.09
SMG8-203ENST00000578922 RAB9AP51151 201 aa15.61■□□□□ 0.09
SMG8-203ENST00000578922 H3BUA1 57 aa15.6■□□□□ 0.09
SMG8-203ENST00000578922 GAGE1Q13065 139 aa15.6■□□□□ 0.09
SMG8-203ENST00000578922 DAZAP1Q96EP5 407 aaKnown RBP15.6■□□□□ 0.09
SMG8-203ENST00000578922 CUBNO60494 3623 aa15.6■□□□□ 0.09
SMG8-203ENST00000578922 ANK3Q12955 4377 aaKnown RBP15.6■□□□□ 0.09
SMG8-203ENST00000578922 C20orf202A1L168 122 aa15.6■□□□□ 0.09
SMG8-203ENST00000578922 IGLC2P0DOY2 106 aa15.6■□□□□ 0.09
SMG8-203ENST00000578922 IGLC3P0DOY3 106 aa15.6■□□□□ 0.09
SMG8-203ENST00000578922 ZNF25P17030 456 aaPredicted RBP15.6■□□□□ 0.09
SMG8-203ENST00000578922 RABAC1Q9UI14 185 aa15.6■□□□□ 0.09
SMG8-203ENST00000578922 RNF24Q9Y225 148 aa15.6■□□□□ 0.09
SMG8-203ENST00000578922 TRBV6-1A0A0K0K1D8 114 aa15.59■□□□□ 0.09
SMG8-203ENST00000578922 ZNF207O43670 478 aaKnown RBP15.59■□□□□ 0.09
SMG8-203ENST00000578922 ARL3P36405 182 aa15.59■□□□□ 0.09
SMG8-203ENST00000578922 CAMPP49913 170 aa15.59■□□□□ 0.09
SMG8-203ENST00000578922 FAM181BA6NEQ2 426 aa15.59■□□□□ 0.09
SMG8-203ENST00000578922 M0R2Z0 102 aa15.59■□□□□ 0.09
SMG8-203ENST00000578922 COL5A1-AS1Q5SY13 56 aa15.59■□□□□ 0.09
SMG8-203ENST00000578922 RBPMS2Q6ZRY4 209 aaKnown RBP15.59■□□□□ 0.09
SMG8-203ENST00000578922 USMG5Q96IX5 58 aa15.59■□□□□ 0.09
SMG8-203ENST00000578922 ZFAND3Q9H8U3 227 aa15.59■□□□□ 0.09
SMG8-203ENST00000578922 BPIFA4PQ86YQ2 179 aa15.58■□□□□ 0.08
SMG8-203ENST00000578922 OR4X2Q8NGF9 303 aa15.58■□□□□ 0.08
SMG8-203ENST00000578922 C17orf77Q96MU5 243 aa15.58■□□□□ 0.08
SMG8-203ENST00000578922 RPH3ALQ9UNE2 315 aa15.58■□□□□ 0.08
SMG8-203ENST00000578922 IGHV3-66A0A0C4DH42 116 aa15.58■□□□□ 0.08
SMG8-203ENST00000578922 DNAJC9-AS1A6NH13 148 aa15.58■□□□□ 0.08
SMG8-203ENST00000578922 NPIPB6E9PJ23 425 aa15.58■□□□□ 0.08
SMG8-203ENST00000578922 BTF3P20290 206 aaKnown RBP15.58■□□□□ 0.08
SMG8-203ENST00000578922 G0S2P27469 103 aa15.58■□□□□ 0.08
SMG8-203ENST00000578922 TCF24Q7RTU0 167 aa15.58■□□□□ 0.08
SMG8-203ENST00000578922 SSBP4Q9BWG4 385 aaPredicted RBP15.58■□□□□ 0.08
SMG8-203ENST00000578922 IGHV3OR16-13A0A075B7E8 117 aa15.57■□□□□ 0.08
SMG8-203ENST00000578922 IGHV3-49A0A0A0MS15 119 aa15.57■□□□□ 0.08
SMG8-203ENST00000578922 IGHV3-74A0A0B4J1X5 117 aa15.57■□□□□ 0.08
SMG8-203ENST00000578922 IGHG4P01861 327 aa15.57■□□□□ 0.08
SMG8-203ENST00000578922 DMRTA1Q5VZB9 504 aa15.57■□□□□ 0.08
SMG8-203ENST00000578922 RNASEKQ6P5S7 137 aaKnown RBP15.57■□□□□ 0.08
SMG8-203ENST00000578922 LINC00322Q6ZN03 302 aaPredicted RBP15.57■□□□□ 0.08
SMG8-203ENST00000578922 OR2D3Q8NGH3 330 aa15.57■□□□□ 0.08
SMG8-203ENST00000578922 DLEU1O43261 78 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 BRI3O95415 125 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 PSMB8P28062 276 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 RELQ04864 619 aaPredicted RBP15.56■□□□□ 0.08
SMG8-203ENST00000578922 SGK494Q96LW2 274 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 TMEM208Q9BTX3 173 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 ZNF580Q9UK33 172 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 PRB4P10163 310 aaPredicted RBP15.56■□□□□ 0.08
SMG8-203ENST00000578922 S100A7AQ86SG5 101 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 Q86TA4 180 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 OR4F17Q8NGA8 305 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 GTSF1Q8WW33 167 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 CHCHD1Q96BP2 118 aaKnown RBP15.56■□□□□ 0.08
SMG8-203ENST00000578922 ESM1Q9NQ30 184 aa15.56■□□□□ 0.08
SMG8-203ENST00000578922 NF1P21359 2839 aa15.55■□□□□ 0.08
SMG8-203ENST00000578922 A0A0G2JLM5 398 aa15.55■□□□□ 0.08
SMG8-203ENST00000578922 TRAV9-2A0A087WT02 112 aa15.55■□□□□ 0.08
SMG8-203ENST00000578922 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.55■□□□□ 0.08
SMG8-203ENST00000578922 CLPSL1A2RUU4 121 aa15.55■□□□□ 0.08
SMG8-203ENST00000578922 EXOC3-AS1Q8N2X6 119 aa15.55■□□□□ 0.08
SMG8-203ENST00000578922 FLNBO75369 2602 aaKnown RBP15.54■□□□□ 0.08
SMG8-203ENST00000578922 C2orf70A6NJV1 201 aa15.54■□□□□ 0.08
SMG8-203ENST00000578922 MRPS12O15235 138 aaKnown RBP15.54■□□□□ 0.08
SMG8-203ENST00000578922 APOHP02749 345 aaPredicted RBP15.54■□□□□ 0.08
SMG8-203ENST00000578922 HNRNPA3P51991 378 aaKnown RBP15.54■□□□□ 0.08
SMG8-203ENST00000578922 EBLN2Q6P2I7 272 aa15.54■□□□□ 0.08
SMG8-203ENST00000578922 Q6ZN92 141 aa15.54■□□□□ 0.08
SMG8-203ENST00000578922 Q71RC1 249 aaPredicted RBP15.54■□□□□ 0.08
SMG8-203ENST00000578922 NDFIP1Q9BT67 221 aa15.54■□□□□ 0.08
SMG8-203ENST00000578922 HIVEP2P31629 2446 aa15.54■□□□□ 0.08
SMG8-203ENST00000578922 LY6G6DO95868 133 aa15.53■□□□□ 0.08
SMG8-203ENST00000578922 C16orf54Q6UWD8 224 aa15.53■□□□□ 0.08
SMG8-203ENST00000578922 LYPD1Q8N2G4 141 aa15.53■□□□□ 0.08
SMG8-203ENST00000578922 PGLYRP4Q96LB8 373 aa15.53■□□□□ 0.08
SMG8-203ENST00000578922 FOXA3P55318 350 aaPredicted RBP15.53■□□□□ 0.08
SMG8-203ENST00000578922 UNQ9165/PRO28630Q6UXU0 137 aa15.53■□□□□ 0.08
SMG8-203ENST00000578922 TMEM86BQ8N661 226 aa15.53■□□□□ 0.08
SMG8-203ENST00000578922 MRPS16Q9Y3D3 137 aaKnown RBP15.53■□□□□ 0.08
SMG8-203ENST00000578922 TRBV19A0A075B6N1 114 aa15.52■□□□□ 0.08
SMG8-203ENST00000578922 HAX1O00165 279 aa15.52■□□□□ 0.08
SMG8-203ENST00000578922 BATFQ16520 125 aa15.52■□□□□ 0.08
SMG8-203ENST00000578922 ATP6V0BQ99437 205 aa15.52■□□□□ 0.08
SMG8-203ENST00000578922 ZFP30Q9Y2G7 519 aa15.52■□□□□ 0.08
SMG8-203ENST00000578922 IGLV2-11P01706 119 aa15.52■□□□□ 0.07
SMG8-203ENST00000578922 TMEM70Q9BUB7 260 aa15.52■□□□□ 0.07
SMG8-203ENST00000578922 LAMTOR2Q9Y2Q5 125 aa15.52■□□□□ 0.07
SMG8-203ENST00000578922 GOLT1BQ9Y3E0 138 aa15.52■□□□□ 0.07
SMG8-203ENST00000578922 CRXO43186 299 aaPredicted RBP15.51■□□□□ 0.07
SMG8-203ENST00000578922 LCN12Q6JVE5 192 aa15.51■□□□□ 0.07
SMG8-203ENST00000578922 TMEM75Q8N9X5 138 aa15.51■□□□□ 0.07
SMG8-203ENST00000578922 URB1-AS1Q96HZ7 61 aa15.51■□□□□ 0.07
SMG8-203ENST00000578922 METTL26Q96S19 204 aa15.51■□□□□ 0.07
SMG8-203ENST00000578922 K7EQM0 130 aa15.51■□□□□ 0.07
SMG8-203ENST00000578922 CHEK1O14757 476 aa15.51■□□□□ 0.07
SMG8-203ENST00000578922 LOC102724200A0A096LPH7 203 aaPredicted RBP15.5■□□□□ 0.07
SMG8-203ENST00000578922 BUB3O43684 328 aa15.5■□□□□ 0.07
SMG8-203ENST00000578922 OR5AL1P0C617 328 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms