RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 AKR1C1Q04828 323 aa6.88□□□□□ -1.31
GGA3-206ENST00000578773 SNX29P2Q8IUI4 249 aa6.88□□□□□ -1.31
GGA3-206ENST00000578773 CCDC71LQ8N9Z2 235 aa6.88□□□□□ -1.31
GGA3-206ENST00000578773 UBE2WQ96B02 151 aa6.88□□□□□ -1.31
GGA3-206ENST00000578773 RTBDNQ9BSG5 229 aaPredicted RBP6.88□□□□□ -1.31
GGA3-206ENST00000578773 ARL6Q9H0F7 186 aa6.88□□□□□ -1.31
GGA3-206ENST00000578773 NAA60Q9H7X0 242 aa6.88□□□□□ -1.31
GGA3-206ENST00000578773 Q9UF83 564 aa6.88□□□□□ -1.31
GGA3-206ENST00000578773 BLOC1S6Q9UL45 172 aa6.88□□□□□ -1.31
GGA3-206ENST00000578773 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
GGA3-206ENST00000578773 PITX3O75364 302 aa6.87□□□□□ -1.31
GGA3-206ENST00000578773 IL5P05113 134 aa6.87□□□□□ -1.31
GGA3-206ENST00000578773 GPX1P07203 203 aa6.87□□□□□ -1.31
GGA3-206ENST00000578773 PFN1P07737 140 aaKnown RBP6.87□□□□□ -1.31
GGA3-206ENST00000578773 IGLC2P0DOY2 106 aa6.87□□□□□ -1.31
GGA3-206ENST00000578773 PLP1P60201 277 aa6.87□□□□□ -1.31
GGA3-206ENST00000578773 VWC2Q2TAL6 325 aa6.87□□□□□ -1.31
GGA3-206ENST00000578773 DPPA3Q6W0C5 159 aa6.87□□□□□ -1.31
GGA3-206ENST00000578773 ZC2HC1AQ96GY0 325 aa6.87□□□□□ -1.31
GGA3-206ENST00000578773 IGKV2-40A0A087WW87 121 aaPredicted RBP6.86□□□□□ -1.31
GGA3-206ENST00000578773 IGKV2D-40P01614 121 aaPredicted RBP6.86□□□□□ -1.31
GGA3-206ENST00000578773 CD3DP04234 171 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 CRISP2P16562 243 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 SMCO1Q147U7 214 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 TMEM183BQ1AE95 376 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 TOR2AQ5JU69 321 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 FAAP20Q6NZ36 180 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 REG3GQ6UW15 175 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 LYZL2Q7Z4W2 148 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 TMEM183AQ8IXX5 376 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 SPACA4Q8TDM5 124 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 RMI2Q96E14 147 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 ARV1Q9H2C2 271 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 BOLA1Q9Y3E2 137 aa6.86□□□□□ -1.31
GGA3-206ENST00000578773 H3BP45 60 aa6.85□□□□□ -1.31
GGA3-206ENST00000578773 PRR4Q16378 134 aa6.85□□□□□ -1.31
GGA3-206ENST00000578773 SCGB2B2Q4G0G5 96 aa6.85□□□□□ -1.31
GGA3-206ENST00000578773 ATRAIDQ6UW56 229 aa6.85□□□□□ -1.31
GGA3-206ENST00000578773 Q8TAT8 98 aa6.85□□□□□ -1.31
GGA3-206ENST00000578773 SMCO3A2RU48 225 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 HLA-DQA1P01909 254 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 RPS19P39019 145 aaKnown RBP6.84□□□□□ -1.31
GGA3-206ENST00000578773 RAB11AP62491 216 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 SRSF9Q13242 221 aaKnown RBP eCLIP6.84□□□□□ -1.31
GGA3-206ENST00000578773 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 RNASE10Q5GAN6 216 aaKnown RBP6.84□□□□□ -1.31
GGA3-206ENST00000578773 LINC00305Q7Z4B0 112 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 NIT1Q86X76 327 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 ZFAND1Q8TCF1 268 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 PLAC8Q9NZF1 115 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 VAX2Q9UIW0 290 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 PXMP4Q9Y6I8 212 aa6.84□□□□□ -1.31
GGA3-206ENST00000578773 SMIM31A0A1B0GVY4 71 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 TNFAIP8O95379 198 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 OR10J4P0C629 311 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 LINC00694P0DN24 101 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 CCR6P51684 374 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 GABARAPL2P60520 117 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 UBE2MP61081 183 aaKnown RBP6.83□□□□□ -1.32
GGA3-206ENST00000578773 SLC38A11Q08AI6 406 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 SPINK6Q6UWN8 80 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 GTSF1Q8WW33 167 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 COMMD3Q9UBI1 195 aa6.83□□□□□ -1.32
GGA3-206ENST00000578773 GAGE12JA6NER3 117 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 FBLL1A6NHQ2 334 aaKnown RBP6.82□□□□□ -1.32
GGA3-206ENST00000578773 ANKRD65E5RJM6 399 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 H7C1H1 209 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 GNRH2O43555 120 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 TMEM127O75204 238 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 ZNF253O75346 499 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 B3GALNT1O75752 331 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 S100A7P31151 101 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 ATP5IP56385 69 aaPredicted RBP6.82□□□□□ -1.32
GGA3-206ENST00000578773 GAGE1Q13065 139 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 GAGE4Q13068 117 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 GAGE5Q13069 117 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 RHOHQ15669 191 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 ENHOQ6UWT2 76 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 CROCCP3Q8IVE0 287 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 TERB2Q8NHR7 220 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 C7orf33Q8WU49 177 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 DPH3Q96FX2 82 aa6.82□□□□□ -1.32
GGA3-206ENST00000578773 FABP12A6NFH5 140 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 WRBO00258 174 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 NDUFB4O95168 129 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 SLPIP03973 132 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 LSM3P62310 102 aaKnown RBP6.81□□□□□ -1.32
GGA3-206ENST00000578773 POLR2GP62487 172 aaKnown RBP eCLIP6.81□□□□□ -1.32
GGA3-206ENST00000578773 BAK1Q16611 211 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 DGAT2L7PQ6IED9 249 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 IZUMO2Q6UXV1 221 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 BPIFA4PQ86YQ2 179 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 EXOC3-AS1Q8N2X6 119 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 LYPD6BQ8NI32 183 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 RAB2BQ8WUD1 216 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 PRADC1Q9BSG0 188 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 SPXQ9BT56 116 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 SRRQ9GZT4 340 aa6.81□□□□□ -1.32
GGA3-206ENST00000578773 C5orf51A6NDU8 294 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms