RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 TAS2R45P59539 299 aa10.95□□□□□ -0.66
SF3B3-215ENST00000577085 RNF141Q8WVD5 230 aa10.95□□□□□ -0.66
SF3B3-215ENST00000577085 FAM167A-AS1Q96KT0 104 aa10.95□□□□□ -0.66
SF3B3-215ENST00000577085 VPS13DQ5THJ4 4388 aa10.95□□□□□ -0.66
SF3B3-215ENST00000577085 IGLV2-18A0A075B6J9 118 aa10.94□□□□□ -0.66
SF3B3-215ENST00000577085 IGKV2-40A0A087WW87 121 aaPredicted RBP10.94□□□□□ -0.66
SF3B3-215ENST00000577085 C7orf71A4D174 169 aa10.94□□□□□ -0.66
SF3B3-215ENST00000577085 PTTG1O95997 202 aa10.94□□□□□ -0.66
SF3B3-215ENST00000577085 IGKV2D-40P01614 121 aaPredicted RBP10.94□□□□□ -0.66
SF3B3-215ENST00000577085 RNASE4P34096 147 aaKnown RBP10.94□□□□□ -0.66
SF3B3-215ENST00000577085 UBE2L3P68036 154 aaKnown RBP10.94□□□□□ -0.66
SF3B3-215ENST00000577085 KHDC3LQ587J8 217 aa10.94□□□□□ -0.66
SF3B3-215ENST00000577085 LINC00336Q6ZUF6 198 aa10.94□□□□□ -0.66
SF3B3-215ENST00000577085 FXYD5Q96DB9 178 aa10.94□□□□□ -0.66
SF3B3-215ENST00000577085 AGPAT4-IT1Q9H0P7 198 aa10.94□□□□□ -0.66
SF3B3-215ENST00000577085 ALG5Q9Y673 324 aa10.94□□□□□ -0.66
SF3B3-215ENST00000577085 RANP62826 216 aaKnown RBP10.93□□□□□ -0.66
SF3B3-215ENST00000577085 OR5I1Q13606 314 aa10.93□□□□□ -0.66
SF3B3-215ENST00000577085 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
SF3B3-215ENST00000577085 ZNF680Q8NEM1 530 aa10.93□□□□□ -0.66
SF3B3-215ENST00000577085 MED28Q9H204 178 aa10.93□□□□□ -0.66
SF3B3-215ENST00000577085 A0A1W2PPV4 95 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 GAGE12BA1L429 117 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 GAGE7O76087 117 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 GAGE12FP0CL80 117 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 GAGE12GP0CL81 117 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 GAGE12IP0CL82 117 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 BTN1A1Q13410 526 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 ACOT6Q3I5F7 207 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-215ENST00000577085 LYPD1Q8N2G4 141 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 PHYHIPLQ96FC7 376 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 FRAS1Q86XX4 4008 aa10.92□□□□□ -0.66
SF3B3-215ENST00000577085 KLLNB2CW77 178 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 RGS13O14921 159 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 NMBP08949 121 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 ZNF138P52744 262 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 CCL18P55774 89 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 FAM3BP58499 235 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-215ENST00000577085 CD300CQ08708 224 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 SOHLH1Q5JUK2 328 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 EIF4E3Q8N5X7 224 aaKnown RBP10.91□□□□□ -0.66
SF3B3-215ENST00000577085 VGLL1Q99990 258 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 Q9H3A6 140 aa10.91□□□□□ -0.66
SF3B3-215ENST00000577085 TRGV2A0A075B6R0 118 aa10.9□□□□□ -0.66
SF3B3-215ENST00000577085 CRISP2P16562 243 aa10.9□□□□□ -0.66
SF3B3-215ENST00000577085 FAM74A1Q5RGS3 127 aa10.9□□□□□ -0.66
SF3B3-215ENST00000577085 CMTM2Q8TAZ6 248 aa10.9□□□□□ -0.66
SF3B3-215ENST00000577085 GNPNAT1Q96EK6 184 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-215ENST00000577085 FAM19A4Q96LR4 140 aa10.9□□□□□ -0.66
SF3B3-215ENST00000577085 HYLS1Q96M11 299 aa10.9□□□□□ -0.66
SF3B3-215ENST00000577085 ARPC5LQ9BPX5 153 aa10.9□□□□□ -0.66
SF3B3-215ENST00000577085 M6PRP20645 277 aa10.89□□□□□ -0.67
SF3B3-215ENST00000577085 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
SF3B3-215ENST00000577085 ZNF266Q14584 549 aa10.89□□□□□ -0.67
SF3B3-215ENST00000577085 RXFP4Q8TDU9 374 aa10.89□□□□□ -0.67
SF3B3-215ENST00000577085 GSN-AS1Q9NRJ2 163 aa10.89□□□□□ -0.67
SF3B3-215ENST00000577085 ZNF492Q9P255 531 aa10.89□□□□□ -0.67
SF3B3-215ENST00000577085 TRAV26-1A0A087WT03 109 aa10.88□□□□□ -0.67
SF3B3-215ENST00000577085 ZNF324O75467 553 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-215ENST00000577085 Q8TAT8 98 aa10.88□□□□□ -0.67
SF3B3-215ENST00000577085 LINC00467Q9BRT7 94 aa10.88□□□□□ -0.67
SF3B3-215ENST00000577085 WFDC1Q9HC57 220 aa10.88□□□□□ -0.67
SF3B3-215ENST00000577085 RPH3ALQ9UNE2 315 aa10.88□□□□□ -0.67
SF3B3-215ENST00000577085 DNAH6Q9C0G6 4158 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 TRGV1A0A0A0MS02 117 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 TRBV7-9A0A0J9YWB2 115 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 A0A0J9YY99 117 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 RBAKDNA6NC62 111 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 PRSS29PA6NIE9 313 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 ANXA2RQ3ZCQ2 193 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 PQLC2Q6ZP29 291 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 Q6ZTI0 123 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 LINC00612Q8N6U2 182 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 OR10G4Q8NGN3 311 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 OR10G9Q8NGN4 311 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 OR10G7Q8NGN6 311 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 ZNF503Q96F45 646 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 TMPRSS5Q9H3S3 457 aa10.87□□□□□ -0.67
SF3B3-215ENST00000577085 IGHV1OR15-1A0A075B7D0 117 aa10.86□□□□□ -0.67
SF3B3-215ENST00000577085 RAB2AP61019 212 aa10.86□□□□□ -0.67
SF3B3-215ENST00000577085 ZFAND2AQ8N6M9 145 aa10.86□□□□□ -0.67
SF3B3-215ENST00000577085 HSD17B11Q8NBQ5 300 aa10.86□□□□□ -0.67
SF3B3-215ENST00000577085 INO80EQ8NBZ0 244 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-215ENST00000577085 OTORQ9NRC9 128 aa10.86□□□□□ -0.67
SF3B3-215ENST00000577085 PGPA6NDG6 321 aa10.85□□□□□ -0.67
SF3B3-215ENST00000577085 DIRC3C9JPN6 131 aa10.85□□□□□ -0.67
SF3B3-215ENST00000577085 HMGB3O15347 200 aaKnown RBP10.85□□□□□ -0.67
SF3B3-215ENST00000577085 EIF3GO75821 320 aaKnown RBP eCLIP10.85□□□□□ -0.67
SF3B3-215ENST00000577085 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
SF3B3-215ENST00000577085 C1orf134Q5TEV5 83 aa10.85□□□□□ -0.67
SF3B3-215ENST00000577085 C11orf72Q8NBR9 251 aa10.85□□□□□ -0.67
SF3B3-215ENST00000577085 ASB13Q8WXK3 278 aa10.85□□□□□ -0.67
SF3B3-215ENST00000577085 AQP10Q96PS8 301 aa10.85□□□□□ -0.67
SF3B3-215ENST00000577085 DNAH10Q8IVF4 4471 aa10.85□□□□□ -0.67
SF3B3-215ENST00000577085 MBP02144 154 aa10.84□□□□□ -0.67
SF3B3-215ENST00000577085 HOXA5P20719 270 aa10.84□□□□□ -0.67
SF3B3-215ENST00000577085 CDC34P49427 236 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-215ENST00000577085 TCL1AP56279 114 aa10.84□□□□□ -0.67
SF3B3-215ENST00000577085 ZNF415Q09FC8 603 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms