RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 OR10D4PQ8NGN7 298 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 OR5AK2Q8NH90 309 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 UBALD1Q8TB05 177 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 SLC25A40Q8TBP6 338 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 FXYD5Q96DB9 178 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 YPEL4Q96NS1 127 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 LINC01587Q99440 93 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 ANAPC13Q9BS18 74 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 OR2J1Q9GZK6 312 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 RPUSD1Q9UJJ7 312 aaKnown RBP2.88□□□□□ -1.95
NUP88-213ENST00000576862 AMMECR1Q9Y4X0 333 aaPredicted RBP2.88□□□□□ -1.95
NUP88-213ENST00000576862 R4GMQ9 66 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 DMDP11532 3685 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 FAM186AA6NE01 2351 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 KNTC1P50748 2209 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 NUP210LQ5VU65 1888 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 USP34Q70CQ2 3546 aa2.88□□□□□ -1.95
NUP88-213ENST00000576862 IGF2RP11717 2491 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 APC2O95996 2303 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 PIEZO1Q92508 2521 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 SPEGQ15772 3267 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 SMIM26A0A096LP01 95 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 IZUMO1RA6ND01 250 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 H0YJW9 148 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 H7BYZ3 331 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 PDCD5O14737 125 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 PLA2G10O15496 165 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 COX7A2P2O60397 106 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 DEDDO75618 318 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 TLX1NBP0CAT3 122 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 SCGB1C2P0DMR2 95 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 OPRK1P41145 380 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 NDUFA6P56556 154 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 RTL8BQ17RB0 113 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 DEFB109BQ30KR1 87 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 PYDC2Q56P42 97 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 BCL2L15Q5TBC7 163 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 FAM27BQ5VT28 67 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 GLT8D1Q68CQ7 371 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 GLIPR1L1Q6UWM5 242 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 AAED1Q7RTV5 226 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 FAM19A3Q7Z5A8 133 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 LRP11Q86VZ4 500 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 SLC22A24Q8N4F4 322 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.87□□□□□ -1.95
NUP88-213ENST00000576862 FNDC9Q8TBE3 224 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 SCGB1C1Q8TD33 95 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 DEDD2Q8WXF8 326 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 CARD19Q96LW7 228 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 SLC25A21Q9BQT8 299 aaPredicted RBP2.87□□□□□ -1.95
NUP88-213ENST00000576862 TM2D3Q9BRN9 247 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 GTSF1LQ9H1H1 148 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 MED28Q9H204 178 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 TAS2R4Q9NYW5 299 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 OR5V1Q9UGF6 321 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 KMT2EQ8IZD2 1858 aa2.87□□□□□ -1.95
NUP88-213ENST00000576862 CACNA1GO43497 2377 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 SDK2Q58EX2 2172 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 ALPK2Q86TB3 2170 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 TRGV5A0A0B4J1U4 118 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 TRAV17A0A0B4J275 112 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 GGT3PA6NGU5 568 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 GGTLC3B5MD39 225 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 J3QQQ9 107 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 K7EM74 188 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 DNASE2O00115 360 aaPredicted RBP2.86□□□□□ -1.95
NUP88-213ENST00000576862 LGALS9O00182 355 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 NPFFO15130 113 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 FSTL3O95633 263 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 HLA-DQB1P01920 261 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 MAS1P04201 325 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 IGLC6P0CF74 106 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 AKAIN1P0CW23 69 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 ZNF728P0DKX0 622 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 LINC00694P0DN24 101 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 NTF3P20783 257 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 CRYGSP22914 178 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 BRS3P32247 399 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 GUCA1AP43080 201 aaPredicted RBP2.86□□□□□ -1.95
NUP88-213ENST00000576862 LYRM7Q5U5X0 104 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 TMEM14EPQ6UXP3 125 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 Q6ZS49 121 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 LINC00173Q6ZV60 143 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 LYPD6Q86Y78 171 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 ABHD14BQ96IU4 210 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 OR4C12Q96R67 309 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 CCL13Q99616 98 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 TMEM243Q9BU79 118 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 SLC25A2Q9BXI2 301 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 TMEM191AQ9H0A3 160 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 ABRACLQ9P1F3 81 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 CYSLTR1Q9Y271 337 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 ZNF835Q9Y2P0 537 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 SOX21Q9Y651 276 aaPredicted RBP2.86□□□□□ -1.95
NUP88-213ENST00000576862 WDFY4Q6ZS81 3184 aa2.86□□□□□ -1.95
NUP88-213ENST00000576862 MAP1BP46821 2468 aaKnown RBP2.86□□□□□ -1.95
NUP88-213ENST00000576862 ANKRD11Q6UB99 2663 aaPredicted RBP2.86□□□□□ -1.95
NUP88-213ENST00000576862 MED12Q93074 2177 aa2.85□□□□□ -1.95
NUP88-213ENST00000576862 CEP192Q8TEP8 1941 aa2.85□□□□□ -1.95
NUP88-213ENST00000576862 IGKV1-27A0A075B6S5 117 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms