RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 OR10G4Q8NGN3 311 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 OR10G9Q8NGN4 311 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 OR10G7Q8NGN6 311 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 LRRC20Q8TCA0 184 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 SLC50A1Q9BRV3 221 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 PSMG3Q9BT73 122 aaPredicted RBP6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 PAXXQ9BUH6 204 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 OR51M1Q9H341 326 aa6.84□□□□□ -1.31
NPLOC4-219ENST00000576713 HYDINQ4G0P3 5121 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 LOC102723971A0A1B0GUV8 181 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 ZNF705EA8MWA4 302 aaPredicted RBP6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 OR7C2O60412 319 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 NBEAP1P0C6P0 100 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 RHOBP62745 196 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 BLOC1S1P78537 153 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 PSG9Q00887 426 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 HIST1H1AQ02539 215 aaPredicted RBP6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 ERCC8Q13216 396 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 ZNF345Q14585 488 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 GUK1Q16774 197 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 SPINK13Q1W4C9 94 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 LGALSLQ3ZCW2 172 aaPredicted RBP6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 LCE1DQ5T752 114 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 SAMD13Q5VXD3 122 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 EBLN2Q6P2I7 272 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 BAP18Q8IXM2 172 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 C1orf158Q8N1D5 194 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 Q8NAQ8 132 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 OR11H2Q8NH07 326 aa6.83□□□□□ -1.32
NPLOC4-219ENST00000576713 TRAV12-2A0A075B6T6 113 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 IGKV2-40A0A087WW87 121 aaPredicted RBP6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 C3orf84H3BNL1 204 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 BCL2L11O43521 198 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 ZNF253O75346 499 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 IGKV2D-40P01614 121 aaPredicted RBP6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 STAG3L2P0CL84 134 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 STAG3L3P0CL85 134 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 ARL14EPLP0DKL9 152 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 CT45A10P0DMU9 189 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 FHITP49789 147 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 UBE2L3P68036 154 aaKnown RBP6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 ACOT6Q3I5F7 207 aaPredicted RBP6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 TMUB2Q71RG4 321 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 RARRES2Q99969 163 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 ARPC5LQ9BPX5 153 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 RNF24Q9Y225 148 aa6.82□□□□□ -1.32
NPLOC4-219ENST00000576713 BORCS7-ASMTA0A0B4J1R7 106 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 IGHV4-28A0A0C4DH34 117 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 TAAR5O14804 337 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 JTBO76095 146 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 C1QBP02746 253 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 CDC34P49427 236 aaPredicted RBP6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 RANP62826 216 aaKnown RBP6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 SERF2P84101 59 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 PDE6HQ13956 83 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 KHDC3LQ587J8 217 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 TMEM41BQ5BJD5 291 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 ZFAND6Q6FIF0 208 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 ZNF705AQ6ZN79 300 aaPredicted RBP6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 AKAP14Q86UN6 197 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 MUC7Q8TAX7 377 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 LINC00476Q8WZB0 136 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 GNPNAT1Q96EK6 184 aaPredicted RBP6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 KRTAP9-3Q9BYQ3 159 aa6.81□□□□□ -1.32
NPLOC4-219ENST00000576713 IGHV3OR16-12A0A075B7B8 117 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 BOLA2-SMG1P6H3BVE0 249 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 DUSP14O95147 198 aaKnown RBP6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 GCHFRP30047 84 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 CASC10Q5T4H9 136 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 PRR9Q5T870 116 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 Q6ZQT7 251 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 SUN5Q8TC36 379 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 FAM19A4Q96LR4 140 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 VGLL1Q99990 258 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 AGPAT4-IT1Q9H0P7 198 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 Q9H3A6 140 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 CELA1Q9UNI1 258 aa6.8□□□□□ -1.32
NPLOC4-219ENST00000576713 A0A0D9SG52 128 aa6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 A0A1W2PPV4 95 aa6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 J3KRW8 73 aa6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 FGF8P55075 233 aaPredicted RBP6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 TAS2R45P59539 299 aa6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 GNG5P63218 68 aa6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 PMS2P11Q13670 270 aa6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 C9orf62Q8N4C0 152 aa6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 Q8TAT8 98 aa6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 MRPL53Q96EL3 112 aaKnown RBP6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 IGF2BP2-AS1Q96M15 143 aa6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 ZNF471Q9BX82 626 aaPredicted RBP6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 C11orf68Q9H3H3 251 aaKnown RBP6.79□□□□□ -1.32
NPLOC4-219ENST00000576713 GGTLC3B5MD39 225 aa6.78□□□□□ -1.32
NPLOC4-219ENST00000576713 AZU1P20160 251 aa6.78□□□□□ -1.32
NPLOC4-219ENST00000576713 NKX2-5P52952 324 aaPredicted RBP6.78□□□□□ -1.32
NPLOC4-219ENST00000576713 NANOS2P60321 138 aaKnown RBP6.78□□□□□ -1.32
NPLOC4-219ENST00000576713 NUTF2P61970 127 aaKnown RBP6.78□□□□□ -1.32
NPLOC4-219ENST00000576713 FOXI1Q12951 378 aa6.78□□□□□ -1.32
NPLOC4-219ENST00000576713 GFI1BQ5VTD9 330 aa6.78□□□□□ -1.32
NPLOC4-219ENST00000576713 PQLC2Q6ZP29 291 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms