RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 TCRAP04437 139 aa3.18□□□□□ -1.9
CALCOCO2-226ENST00000575461 SLC25A5P05141 298 aaKnown RBP3.18□□□□□ -1.9
CALCOCO2-226ENST00000575461 BLCAPP62952 87 aa3.18□□□□□ -1.9
CALCOCO2-226ENST00000575461 COPZ2Q9P299 210 aa3.18□□□□□ -1.9
CALCOCO2-226ENST00000575461 PLXNA4Q9HCM2 1894 aa3.18□□□□□ -1.9
CALCOCO2-226ENST00000575461 A0A096LPI6 279 aa3.17□□□□□ -1.9
CALCOCO2-226ENST00000575461 NUPR1O60356 82 aa3.17□□□□□ -1.9
CALCOCO2-226ENST00000575461 SLC25A4P12235 298 aa3.17□□□□□ -1.9
CALCOCO2-226ENST00000575461 CCL4P13236 92 aa3.17□□□□□ -1.9
CALCOCO2-226ENST00000575461 QRFPP83859 136 aa3.17□□□□□ -1.9
CALCOCO2-226ENST00000575461 FOXI2Q6ZQN5 318 aa3.17□□□□□ -1.9
CALCOCO2-226ENST00000575461 TCEAL4Q96EI5 215 aa3.17□□□□□ -1.9
CALCOCO2-226ENST00000575461 NABP2Q9BQ15 211 aa3.17□□□□□ -1.9
CALCOCO2-226ENST00000575461 ADGRB2O60241 1585 aa3.17□□□□□ -1.9
CALCOCO2-226ENST00000575461 H3BRM9 83 aa3.16□□□□□ -1.9
CALCOCO2-226ENST00000575461 IGKV2-29A2NJV5 120 aaPredicted RBP3.15□□□□□ -1.91
CALCOCO2-226ENST00000575461 SMIM24O75264 130 aa3.15□□□□□ -1.91
CALCOCO2-226ENST00000575461 MIR22HGQ0VDD5 57 aa3.15□□□□□ -1.91
CALCOCO2-226ENST00000575461 CASC2Q6XLA1 102 aa3.15□□□□□ -1.91
CALCOCO2-226ENST00000575461 MPC1LP0DKB6 136 aa3.14□□□□□ -1.91
CALCOCO2-226ENST00000575461 EVI2AP22794 236 aa3.14□□□□□ -1.91
CALCOCO2-226ENST00000575461 ETV6P41212 452 aa3.14□□□□□ -1.91
CALCOCO2-226ENST00000575461 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
CALCOCO2-226ENST00000575461 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
CALCOCO2-226ENST00000575461 BANF2Q9H503 90 aa3.14□□□□□ -1.91
CALCOCO2-226ENST00000575461 CECR2Q9BXF3 1484 aa3.14□□□□□ -1.91
CALCOCO2-226ENST00000575461 VIRMAQ69YN4 1812 aaKnown RBP3.14□□□□□ -1.91
CALCOCO2-226ENST00000575461 INTS1Q8N201 2190 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-226ENST00000575461 C3orf85A0A1B0GTC6 90 aa3.13□□□□□ -1.91
CALCOCO2-226ENST00000575461 GEMIN2O14893 280 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-226ENST00000575461 HIST1H1BP16401 226 aaKnown RBP3.13□□□□□ -1.91
CALCOCO2-226ENST00000575461 HIST1H1AQ02539 215 aaPredicted RBP3.13□□□□□ -1.91
CALCOCO2-226ENST00000575461 ASB16-AS1Q495Z4 193 aa3.13□□□□□ -1.91
CALCOCO2-226ENST00000575461 FAM19A2Q8N3H0 131 aa3.13□□□□□ -1.91
CALCOCO2-226ENST00000575461 CIB3Q96Q77 187 aaPredicted RBP3.13□□□□□ -1.91
CALCOCO2-226ENST00000575461 MPC1Q9Y5U8 109 aa3.13□□□□□ -1.91
CALCOCO2-226ENST00000575461 OVOS2A0A0J9YW53 1432 aa3.12□□□□□ -1.91
CALCOCO2-226ENST00000575461 OVOS2Q6IE36 1432 aa3.12□□□□□ -1.91
CALCOCO2-226ENST00000575461 COX4I1P13073 169 aa3.12□□□□□ -1.91
CALCOCO2-226ENST00000575461 UNC79Q9P2D8 2635 aa3.12□□□□□ -1.91
CALCOCO2-226ENST00000575461 KIAA1549Q9HCM3 1950 aa3.12□□□□□ -1.91
CALCOCO2-226ENST00000575461 FREM3P0C091 2139 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 NOTCH2Q04721 2471 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 POLEQ07864 2286 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 TRBV6-7A0A0A0MS04 114 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 PNMA8CA0A1B0GUJ8 204 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 ZNF727A8MUV8 499 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 CCL25O15444 150 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 PFDN5Q99471 154 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 TMEM14CQ9P0S9 112 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 PAIP2BQ9ULR5 123 aaKnown RBP3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 TNRC6BQ9UPQ9 1833 aaKnown RBP3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 ARFGEF3Q5TH69 2177 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 CPDO75976 1380 aa3.11□□□□□ -1.91
CALCOCO2-226ENST00000575461 COL1A1P02452 1464 aaPredicted RBP3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 IGHV3-33P01772 117 aa3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 CCSMST1Q4G0I0 132 aa3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 GDF5OSQ5U4N7 250 aa3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 TMEM91Q6ZNR0 172 aa3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 ZCCHC23Q6ZST2 131 aa3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 MRPL57Q9BQC6 102 aaKnown RBP3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 FAM107BQ9H098 131 aa3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 ZFC3H1O60293 1989 aaKnown RBP3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 TANC2Q9HCD6 1990 aa3.1□□□□□ -1.91
CALCOCO2-226ENST00000575461 EXPH5Q8NEV8 1989 aa3.09□□□□□ -1.91
CALCOCO2-226ENST00000575461 USP54Q70EL1 1684 aa3.09□□□□□ -1.91
CALCOCO2-226ENST00000575461 HLA-DRB4P13762 266 aa3.09□□□□□ -1.91
CALCOCO2-226ENST00000575461 MMGT1Q8N4V1 131 aa3.09□□□□□ -1.91
CALCOCO2-226ENST00000575461 LINC00526Q96FQ7 95 aa3.09□□□□□ -1.91
CALCOCO2-226ENST00000575461 SMIM3Q9BZL3 60 aa3.09□□□□□ -1.91
CALCOCO2-226ENST00000575461 METTL1Q9UBP6 276 aaKnown RBP3.09□□□□□ -1.91
CALCOCO2-226ENST00000575461 HLA-DRB4X5D2U9 266 aa3.09□□□□□ -1.91
CALCOCO2-226ENST00000575461 IGLV3-32A0A0A0MS00 114 aa3.08□□□□□ -1.92
CALCOCO2-226ENST00000575461 IFITM5A6NNB3 132 aa3.08□□□□□ -1.92
CALCOCO2-226ENST00000575461 CKS2P33552 79 aa3.08□□□□□ -1.92
CALCOCO2-226ENST00000575461 AKR1D1P51857 326 aa3.08□□□□□ -1.92
CALCOCO2-226ENST00000575461 PCBD1P61457 104 aa3.08□□□□□ -1.92
CALCOCO2-226ENST00000575461 CCDC58Q4VC31 144 aa3.08□□□□□ -1.92
CALCOCO2-226ENST00000575461 LINC00322Q6ZN03 302 aaPredicted RBP3.08□□□□□ -1.92
CALCOCO2-226ENST00000575461 OR8J3Q8NGG0 315 aa3.08□□□□□ -1.92
CALCOCO2-226ENST00000575461 ZFP30Q9Y2G7 519 aa3.08□□□□□ -1.92
CALCOCO2-226ENST00000575461 SDK1Q7Z5N4 2213 aa3.07□□□□□ -1.92
CALCOCO2-226ENST00000575461 M0R2Z0 102 aa3.07□□□□□ -1.92
CALCOCO2-226ENST00000575461 DNAL4O96015 105 aa3.07□□□□□ -1.92
CALCOCO2-226ENST00000575461 ZNF25P17030 456 aaPredicted RBP3.07□□□□□ -1.92
CALCOCO2-226ENST00000575461 DNAJB13P59910 316 aa3.07□□□□□ -1.92
CALCOCO2-226ENST00000575461 SNRPD3P62318 126 aaKnown RBP3.07□□□□□ -1.92
CALCOCO2-226ENST00000575461 OTOSQ8NHW6 89 aa3.07□□□□□ -1.92
CALCOCO2-226ENST00000575461 C10orf105Q8TEF2 133 aa3.07□□□□□ -1.92
CALCOCO2-226ENST00000575461 LOC107984156A0A0G2JMH3 177 aa3.06□□□□□ -1.92
CALCOCO2-226ENST00000575461 DISP2A7MBM2 1401 aa3.06□□□□□ -1.92
CALCOCO2-226ENST00000575461 J3QR89 54 aa3.06□□□□□ -1.92
CALCOCO2-226ENST00000575461 KRTAP21-3Q3LHN1 58 aa3.06□□□□□ -1.92
CALCOCO2-226ENST00000575461 ARL17AQ8IVW1 177 aa3.06□□□□□ -1.92
CALCOCO2-226ENST00000575461 HEATR1Q9H583 2144 aaKnown RBP3.06□□□□□ -1.92
CALCOCO2-226ENST00000575461 GLYATL3Q5SZD4 288 aa3.05□□□□□ -1.92
CALCOCO2-226ENST00000575461 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
CALCOCO2-226ENST00000575461 IZUMO2Q6UXV1 221 aa3.05□□□□□ -1.92
CALCOCO2-226ENST00000575461 C10orf111Q8N326 155 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms