RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 MAP6D1Q9H9H5 199 aa17.92■□□□□ 0.46
ATPAF1-213ENST00000574428 DEFB131AP59861 70 aa17.91■□□□□ 0.46
ATPAF1-213ENST00000574428 K7EQM0 130 aa17.91■□□□□ 0.46
ATPAF1-213ENST00000574428 ERCC8Q13216 396 aa17.91■□□□□ 0.46
ATPAF1-213ENST00000574428 PRR31Q5SQ13 230 aa17.91■□□□□ 0.46
ATPAF1-213ENST00000574428 LINC01551Q86U37 167 aa17.91■□□□□ 0.46
ATPAF1-213ENST00000574428 TMEM242Q9NWH2 141 aa17.91■□□□□ 0.46
ATPAF1-213ENST00000574428 KLF12Q9Y4X4 402 aa17.91■□□□□ 0.46
ATPAF1-213ENST00000574428 NOTCH3Q9UM47 2321 aa17.9■□□□□ 0.46
ATPAF1-213ENST00000574428 CXorf65A6NEN9 183 aa17.9■□□□□ 0.46
ATPAF1-213ENST00000574428 PGPEP1LA6NFU8 196 aa17.9■□□□□ 0.46
ATPAF1-213ENST00000574428 IGLV2-11P01706 119 aa17.9■□□□□ 0.46
ATPAF1-213ENST00000574428 MT-ND4LP03901 98 aa17.9■□□□□ 0.46
ATPAF1-213ENST00000574428 UBE2G1P62253 170 aa17.9■□□□□ 0.46
ATPAF1-213ENST00000574428 ODF3L2Q3SX64 289 aa17.9■□□□□ 0.46
ATPAF1-213ENST00000574428 ASCL2Q99929 193 aa17.9■□□□□ 0.46
ATPAF1-213ENST00000574428 SERTM2A0A1B0GWG4 89 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 TMEM183BQ1AE95 376 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 BEAN1Q3B7T3 259 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 GDF5OSQ5U4N7 250 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 TMEM75Q8N9X5 138 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 FMC1Q96HJ9 113 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 CTDSP1Q9GZU7 261 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 PKD1L1Q8TDX9 2849 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 HIST1H1AQ02539 215 aaPredicted RBP17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 ZNF124Q15973 351 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 OXLD1Q5BKU9 147 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 CENPWQ5EE01 88 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 OR8A1Q8NGG7 326 aa17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 AURKAIP1Q9NWT8 199 aaPredicted RBP17.89■□□□□ 0.45
ATPAF1-213ENST00000574428 WIPF1O43516 503 aa17.88■□□□□ 0.45
ATPAF1-213ENST00000574428 PRNTQ86SH4 94 aa17.88■□□□□ 0.45
ATPAF1-213ENST00000574428 Q86TA4 180 aa17.88■□□□□ 0.45
ATPAF1-213ENST00000574428 APRG1Q8IVJ8 170 aa17.88■□□□□ 0.45
ATPAF1-213ENST00000574428 OR10J6PQ8NGY7 276 aa17.88■□□□□ 0.45
ATPAF1-213ENST00000574428 Q8TAT8 98 aa17.88■□□□□ 0.45
ATPAF1-213ENST00000574428 URGCP-MRPS24S4R325 110 aa17.88■□□□□ 0.45
ATPAF1-213ENST00000574428 RBAKDNA6NC62 111 aa17.87■□□□□ 0.45
ATPAF1-213ENST00000574428 CD7P09564 240 aa17.87■□□□□ 0.45
ATPAF1-213ENST00000574428 FLI1Q01543 452 aaPredicted RBP17.87■□□□□ 0.45
ATPAF1-213ENST00000574428 ELOBQ15370 118 aa17.87■□□□□ 0.45
ATPAF1-213ENST00000574428 IGF2BP2-AS1Q96M15 143 aa17.87■□□□□ 0.45
ATPAF1-213ENST00000574428 AGPAT4-IT1Q9H0P7 198 aa17.87■□□□□ 0.45
ATPAF1-213ENST00000574428 PSG8Q9UQ74 426 aa17.87■□□□□ 0.45
ATPAF1-213ENST00000574428 C9JCJ5 164 aa17.86■□□□□ 0.45
ATPAF1-213ENST00000574428 SORL1Q92673 2214 aa17.86■□□□□ 0.45
ATPAF1-213ENST00000574428 KNCNA6PVL3 124 aa17.86■□□□□ 0.45
ATPAF1-213ENST00000574428 S100A9P06702 114 aaKnown RBP17.86■□□□□ 0.45
ATPAF1-213ENST00000574428 GNG4P50150 75 aa17.86■□□□□ 0.45
ATPAF1-213ENST00000574428 TAS2R60P59551 318 aa17.86■□□□□ 0.45
ATPAF1-213ENST00000574428 NHLRC2Q8NBF2 726 aa17.86■□□□□ 0.45
ATPAF1-213ENST00000574428 A0A0J9YX75 114 aa17.85■□□□□ 0.45
ATPAF1-213ENST00000574428 OR11H12B2RN74 326 aa17.85■□□□□ 0.45
ATPAF1-213ENST00000574428 RAB5AP20339 215 aa17.85■□□□□ 0.45
ATPAF1-213ENST00000574428 EBLN2Q6P2I7 272 aa17.85■□□□□ 0.45
ATPAF1-213ENST00000574428 C9orf47Q6ZRZ4 202 aa17.85■□□□□ 0.45
ATPAF1-213ENST00000574428 OCC1Q8TAD7 63 aa17.85■□□□□ 0.45
ATPAF1-213ENST00000574428 SAV1Q9H4B6 383 aaPredicted RBP17.85■□□□□ 0.45
ATPAF1-213ENST00000574428 LOC105371267A0A1B0GV96 52 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 NPIPB6E9PJ23 425 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 ACTL10Q5JWF8 245 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 TMEM78Q5T7P6 136 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 FOXI2Q6ZQN5 318 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 ANAPC16Q96DE5 110 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 GPR61Q9BZJ8 451 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 LTAP01374 205 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 CXCL1P09341 107 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 BAGE2Q86Y30 109 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 WFDC10AQ9H1F0 79 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 LY96Q9Y6Y9 160 aa17.84■□□□□ 0.45
ATPAF1-213ENST00000574428 CMYA5Q8N3K9 4069 aa17.83■□□□□ 0.44
ATPAF1-213ENST00000574428 TGIF2-C20orf24A0A0A6YYL0 155 aa17.83■□□□□ 0.44
ATPAF1-213ENST00000574428 H7BYZ3 331 aa17.83■□□□□ 0.44
ATPAF1-213ENST00000574428 TRBV6-1A0A0K0K1D8 114 aa17.82■□□□□ 0.44
ATPAF1-213ENST00000574428 K7EN84 100 aa17.82■□□□□ 0.44
ATPAF1-213ENST00000574428 IGKV3-20P01619 116 aa17.82■□□□□ 0.44
ATPAF1-213ENST00000574428 ZNF138P52744 262 aa17.82■□□□□ 0.44
ATPAF1-213ENST00000574428 CT45A10P0DMU9 189 aa17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 C19orf73Q9NVV2 129 aa17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 FBLL1A6NHQ2 334 aaKnown RBP17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 IGLV2-8P01709 118 aa17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 CMC4P56277 68 aaPredicted RBP17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 KRTAP21-3Q3LHN1 58 aa17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 GTSCR1Q86UQ5 136 aa17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 OR4B1Q8NGF8 309 aa17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 LINC00477Q96M19 166 aa17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 ZNF492Q9P255 531 aa17.81■□□□□ 0.44
ATPAF1-213ENST00000574428 HLA-DRB4P13762 266 aa17.8■□□□□ 0.44
ATPAF1-213ENST00000574428 SFRP2Q96HF1 295 aa17.8■□□□□ 0.44
ATPAF1-213ENST00000574428 C8orf49Q96NF6 230 aa17.8■□□□□ 0.44
ATPAF1-213ENST00000574428 PRR25Q96S07 402 aa17.8■□□□□ 0.44
ATPAF1-213ENST00000574428 HLA-DRB4X5D2U9 266 aa17.8■□□□□ 0.44
ATPAF1-213ENST00000574428 FAM110AQ9BQ89 295 aa17.79■□□□□ 0.44
ATPAF1-213ENST00000574428 G3V4G9 280 aa17.79■□□□□ 0.44
ATPAF1-213ENST00000574428 H3BMM0 161 aa17.79■□□□□ 0.44
ATPAF1-213ENST00000574428 DUSP14O95147 198 aaKnown RBP17.79■□□□□ 0.44
ATPAF1-213ENST00000574428 MGST1P10620 155 aaKnown RBP17.79■□□□□ 0.44
ATPAF1-213ENST00000574428 ZFP30Q9Y2G7 519 aa17.79■□□□□ 0.44
ATPAF1-213ENST00000574428 PFN1P07737 140 aaKnown RBP17.78■□□□□ 0.44
ATPAF1-213ENST00000574428 TMEM183AQ8IXX5 376 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms