RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 HSPB11Q9Y547 144 aa1.29□□□□□ -2.2
TOM1L1-215ENST00000572905 COL1A1P02452 1464 aaPredicted RBP1.29□□□□□ -2.2
TOM1L1-215ENST00000572905 E9PCH4 1651 aa1.29□□□□□ -2.2
TOM1L1-215ENST00000572905 PTPRFP10586 1907 aa1.28□□□□□ -2.2
TOM1L1-215ENST00000572905 Q8N6K4 173 aa1.28□□□□□ -2.2
TOM1L1-215ENST00000572905 CLEC2BQ92478 149 aa1.28□□□□□ -2.2
TOM1L1-215ENST00000572905 NIT2Q9NQR4 276 aa1.28□□□□□ -2.2
TOM1L1-215ENST00000572905 SIP14410 1827 aa1.28□□□□□ -2.2
TOM1L1-215ENST00000572905 SNRNP200O75643 2136 aaKnown RBP1.28□□□□□ -2.2
TOM1L1-215ENST00000572905 CHD3Q12873 2000 aaKnown RBP1.27□□□□□ -2.21
TOM1L1-215ENST00000572905 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.27□□□□□ -2.21
TOM1L1-215ENST00000572905 IGLV3-1P01715 115 aa1.27□□□□□ -2.21
TOM1L1-215ENST00000572905 LSM3P62310 102 aaKnown RBP1.27□□□□□ -2.21
TOM1L1-215ENST00000572905 GLIPR1L1Q6UWM5 242 aa1.27□□□□□ -2.21
TOM1L1-215ENST00000572905 LINC00575Q6W349 94 aa1.27□□□□□ -2.21
TOM1L1-215ENST00000572905 CASC2Q6XLA1 102 aa1.27□□□□□ -2.21
TOM1L1-215ENST00000572905 MORN4Q8NDC4 146 aa1.27□□□□□ -2.21
TOM1L1-215ENST00000572905 GINS2Q9Y248 185 aa1.27□□□□□ -2.21
TOM1L1-215ENST00000572905 A0A0J9YY99 117 aa1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 LOC107984640A0A0U1RRK4 108 aa1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 C3orf85A0A1B0GTC6 90 aa1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 A0A1W2PPM0 123 aa1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 RPS3P23396 243 aaKnown RBP eCLIP1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 FOXA3P55318 350 aaPredicted RBP1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 RPS28P62857 69 aaKnown RBP1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 ZCCHC23Q6ZST2 131 aa1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 TAC4Q86UU9 113 aa1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 OR10AC1Q8NH08 325 aa1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 CBLN4Q9NTU7 201 aa1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 NUP210Q8TEM1 1887 aaPredicted RBP1.26□□□□□ -2.21
TOM1L1-215ENST00000572905 DLC1Q96QB1 1528 aa1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 A2MP01023 1474 aa1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 ERBINQ96RT1 1412 aa1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 LOC107986453A0A1B0GWG9 222 aa1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 ARL5CA6NH57 179 aa1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 NBEAP1P0C6P0 100 aa1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 CRYGSP22914 178 aa1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 TMEM229BQ8NBD8 167 aa1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 CIB3Q96Q77 187 aaPredicted RBP1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 BOKQ9UMX3 212 aaPredicted RBP1.25□□□□□ -2.21
TOM1L1-215ENST00000572905 TCOF1Q13428 1488 aaKnown RBP1.24□□□□□ -2.21
TOM1L1-215ENST00000572905 MED12Q93074 2177 aa1.24□□□□□ -2.21
TOM1L1-215ENST00000572905 RPL22P35268 128 aaKnown RBP1.24□□□□□ -2.21
TOM1L1-215ENST00000572905 NEDD8Q15843 81 aa1.24□□□□□ -2.21
TOM1L1-215ENST00000572905 NABP2Q9BQ15 211 aa1.24□□□□□ -2.21
TOM1L1-215ENST00000572905 SPANXA1Q9NS26 97 aa1.24□□□□□ -2.21
TOM1L1-215ENST00000572905 FKBP11Q9NYL4 201 aa1.24□□□□□ -2.21
TOM1L1-215ENST00000572905 EML5Q05BV3 1969 aa1.23□□□□□ -2.21
TOM1L1-215ENST00000572905 OCIAD2Q56VL3 154 aa1.23□□□□□ -2.21
TOM1L1-215ENST00000572905 SBSPONQ8IVN8 264 aa1.23□□□□□ -2.21
TOM1L1-215ENST00000572905 C5orf17Q8NAS9 161 aa1.23□□□□□ -2.21
TOM1L1-215ENST00000572905 OR5A2Q8NGI9 324 aa1.23□□□□□ -2.21
TOM1L1-215ENST00000572905 NAT14Q8WUY8 206 aa1.23□□□□□ -2.21
TOM1L1-215ENST00000572905 ANKRD31Q8N7Z5 1873 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 J3KT08 172 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 M0QZK8 103 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 CD14P08571 375 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 FXYD4P59646 89 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 PRB3Q04118 309 aaPredicted RBP1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 CCSMST1Q4G0I0 132 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 IZUMO2Q6UXV1 221 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 BRK1Q8WUW1 75 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 AP1S3Q96PC3 154 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 MPC1Q9Y5U8 109 aa1.22□□□□□ -2.21
TOM1L1-215ENST00000572905 LOC107984156A0A0G2JMH3 177 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 BBIP1A8MTZ0 92 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 SULT1C4O75897 302 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 SLC25A4P12235 298 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 PDE6GP18545 87 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 DNAJB13P59910 316 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 BLCAPP62952 87 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 ARL17AQ8IVW1 177 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 OR51A4Q8NGJ6 313 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 SPANXCQ9NY87 97 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 FAM135BQ49AJ0 1406 aa1.21□□□□□ -2.22
TOM1L1-215ENST00000572905 LAMA4Q16363 1823 aa1.2□□□□□ -2.22
TOM1L1-215ENST00000572905 PHRF1Q9P1Y6 1649 aaKnown RBP1.2□□□□□ -2.22
TOM1L1-215ENST00000572905 HBDP02042 147 aa1.2□□□□□ -2.22
TOM1L1-215ENST00000572905 ETV6P41212 452 aa1.2□□□□□ -2.22
TOM1L1-215ENST00000572905 AKAP14Q86UN6 197 aa1.2□□□□□ -2.22
TOM1L1-215ENST00000572905 LIMD2Q9BT23 127 aa1.2□□□□□ -2.22
TOM1L1-215ENST00000572905 ASCC3Q8N3C0 2202 aaKnown RBP1.2□□□□□ -2.22
TOM1L1-215ENST00000572905 CNTRLQ7Z7A1 2325 aa1.2□□□□□ -2.22
TOM1L1-215ENST00000572905 TET1Q8NFU7 2136 aa1.19□□□□□ -2.22
TOM1L1-215ENST00000572905 IFITM5A6NNB3 132 aa1.19□□□□□ -2.22
TOM1L1-215ENST00000572905 UQCRQO14949 82 aa1.19□□□□□ -2.22
TOM1L1-215ENST00000572905 IGHV3-30P01768 117 aa1.19□□□□□ -2.22
TOM1L1-215ENST00000572905 IGHV3-30-5P0DP03 117 aa1.19□□□□□ -2.22
TOM1L1-215ENST00000572905 OR8I2Q8N0Y5 310 aa1.19□□□□□ -2.22
TOM1L1-215ENST00000572905 TCTEX1D1Q8N7M0 179 aa1.19□□□□□ -2.22
TOM1L1-215ENST00000572905 A0A1B0GX51 115 aa1.18□□□□□ -2.22
TOM1L1-215ENST00000572905 A6NN06 94 aa1.18□□□□□ -2.22
TOM1L1-215ENST00000572905 ZNF727A8MUV8 499 aa1.18□□□□□ -2.22
TOM1L1-215ENST00000572905 DPM2O94777 84 aa1.18□□□□□ -2.22
TOM1L1-215ENST00000572905 CCL4P13236 92 aa1.18□□□□□ -2.22
TOM1L1-215ENST00000572905 PYDC1Q8WXC3 89 aa1.18□□□□□ -2.22
TOM1L1-215ENST00000572905 C19orf12Q9NSK7 152 aa1.18□□□□□ -2.22
TOM1L1-215ENST00000572905 OVOS2A0A0G2JMS6 1433 aa1.17□□□□□ -2.22
TOM1L1-215ENST00000572905 TRAV36DV7A0A075B6V5 113 aa1.17□□□□□ -2.22
TOM1L1-215ENST00000572905 A0A1W2PPB8 328 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms