RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SMAD5-AS1Q9Y6J3 95 aa13.6□□□□□ -0.23
SCARF1-205ENST00000571272 C9orf118A6NHY6 69 aa13.6□□□□□ -0.23
SCARF1-205ENST00000571272 ZNF575Q86XF7 245 aa13.6□□□□□ -0.23
SCARF1-205ENST00000571272 H3BRM9 83 aa13.59□□□□□ -0.23
SCARF1-205ENST00000571272 IGHG4P01861 327 aa13.59□□□□□ -0.23
SCARF1-205ENST00000571272 EVI2AP22794 236 aa13.59□□□□□ -0.23
SCARF1-205ENST00000571272 ERCC8Q13216 396 aa13.59□□□□□ -0.23
SCARF1-205ENST00000571272 ADAMTSL5Q6ZMM2 481 aa13.59□□□□□ -0.23
SCARF1-205ENST00000571272 K7ERU9 68 aa13.58□□□□□ -0.23
SCARF1-205ENST00000571272 HSD52Q0P140 79 aa13.58□□□□□ -0.23
SCARF1-205ENST00000571272 LY6G5BQ8NDX9 201 aa13.58□□□□□ -0.23
SCARF1-205ENST00000571272 ASH1LQ9NR48 2969 aaKnown RBP13.58□□□□□ -0.23
SCARF1-205ENST00000571272 FAM90A27PA6NNH2 459 aa13.58□□□□□ -0.24
SCARF1-205ENST00000571272 IGLC6P0CF74 106 aa13.58□□□□□ -0.24
SCARF1-205ENST00000571272 BMI1P35226 326 aa13.58□□□□□ -0.24
SCARF1-205ENST00000571272 CEACAM3P40198 252 aa13.58□□□□□ -0.24
SCARF1-205ENST00000571272 ZNF562Q6V9R5 426 aa13.58□□□□□ -0.24
SCARF1-205ENST00000571272 OR11H6Q8NGC7 330 aa13.58□□□□□ -0.24
SCARF1-205ENST00000571272 TTTY13Q9BZ97 58 aa13.58□□□□□ -0.24
SCARF1-205ENST00000571272 SPTBN1Q01082 2364 aaKnown RBP13.58□□□□□ -0.24
SCARF1-205ENST00000571272 A0A0G2JLM5 398 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 CTSGP08311 255 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 GATA1P15976 413 aaPredicted RBP13.57□□□□□ -0.24
SCARF1-205ENST00000571272 DYNAPQ8N1N2 210 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 OR9G4Q8NGQ1 327 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 S100A7P31151 101 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 UFSP1Q6NVU6 142 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 GTF2H5Q6ZYL4 71 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 RNF185Q96GF1 192 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 MEGF9Q9H1U4 602 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 LEPP41159 167 aa13.57□□□□□ -0.24
SCARF1-205ENST00000571272 PRAC2D3DTV9 90 aa13.56□□□□□ -0.24
SCARF1-205ENST00000571272 MAP1LC3AQ9H492 121 aa13.56□□□□□ -0.24
SCARF1-205ENST00000571272 COX8CQ7Z4L0 72 aa13.56□□□□□ -0.24
SCARF1-205ENST00000571272 TTC9CQ8N5M4 171 aa13.56□□□□□ -0.24
SCARF1-205ENST00000571272 RNF182Q8N6D2 247 aa13.55□□□□□ -0.24
SCARF1-205ENST00000571272 IGKV2D-26A0A0A0MRZ7 120 aa13.55□□□□□ -0.24
SCARF1-205ENST00000571272 IGHV3-66A0A0C4DH42 116 aa13.55□□□□□ -0.24
SCARF1-205ENST00000571272 SMIM15Q7Z3B0 74 aa13.55□□□□□ -0.24
SCARF1-205ENST00000571272 OR4X2Q8NGF9 303 aa13.55□□□□□ -0.24
SCARF1-205ENST00000571272 IGHV3OR16-13A0A075B7E8 117 aa13.54□□□□□ -0.24
SCARF1-205ENST00000571272 IGHV3-74A0A0B4J1X5 117 aa13.54□□□□□ -0.24
SCARF1-205ENST00000571272 PRSS1P07477 247 aa13.54□□□□□ -0.24
SCARF1-205ENST00000571272 OR2K2Q8NGT1 345 aa13.54□□□□□ -0.24
SCARF1-205ENST00000571272 ZNF48Q96MX3 618 aaPredicted RBP13.54□□□□□ -0.24
SCARF1-205ENST00000571272 COL25A1Q9BXS0 654 aaPredicted RBP13.54□□□□□ -0.24
SCARF1-205ENST00000571272 FABP5P3A8MUU1 101 aa13.54□□□□□ -0.24
SCARF1-205ENST00000571272 K7EP34 96 aa13.54□□□□□ -0.24
SCARF1-205ENST00000571272 SIVA1O15304 175 aa13.54□□□□□ -0.24
SCARF1-205ENST00000571272 TNFRSF6BO95407 300 aa13.54□□□□□ -0.24
SCARF1-205ENST00000571272 RIPPLY3P57055 190 aa13.54□□□□□ -0.24
SCARF1-205ENST00000571272 PTPRQQ9UMZ3 2332 aa13.53□□□□□ -0.24
SCARF1-205ENST00000571272 ODF3BA8MYP8 253 aa13.53□□□□□ -0.24
SCARF1-205ENST00000571272 GCSHP23434 173 aa13.53□□□□□ -0.24
SCARF1-205ENST00000571272 IL17RELQ6ZVW7 336 aa13.53□□□□□ -0.24
SCARF1-205ENST00000571272 PRTN3P24158 256 aa13.52□□□□□ -0.24
SCARF1-205ENST00000571272 ARL6IP6Q8N6S5 226 aa13.52□□□□□ -0.24
SCARF1-205ENST00000571272 ODF1Q14990 250 aa13.52□□□□□ -0.25
SCARF1-205ENST00000571272 FCER1GP30273 86 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 VMO1Q7Z5L0 202 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 VKORC1Q9BQB6 163 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 SPCS1Q9Y6A9 102 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 AKAP6Q13023 2319 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 FBLL1A6NHQ2 334 aaKnown RBP13.51□□□□□ -0.25
SCARF1-205ENST00000571272 TMEM158Q8WZ71 300 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 TIMD4Q96H15 378 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 FOXC2Q99958 501 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 CSTL1Q9H114 145 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 HHLA3Q9XRX5 114 aa13.51□□□□□ -0.25
SCARF1-205ENST00000571272 A0A1W2PPM0 123 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 TMEM11P17152 192 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 GTSCR1Q86UQ5 136 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 DTX2Q86UW9 622 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 IGHV3-49A0A0A0MS15 119 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 IGHV7-81A0A0B4J1V7 117 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 FXYD2P54710 66 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 HRNRQ86YZ3 2850 aaPredicted RBP13.5□□□□□ -0.25
SCARF1-205ENST00000571272 ECSCRQ19T08 205 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 C15orf32Q32M92 178 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 PSMG3-AS1Q96PY0 264 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 CNFNQ9BYD5 112 aa13.5□□□□□ -0.25
SCARF1-205ENST00000571272 K7EMI3 77 aa13.49□□□□□ -0.25
SCARF1-205ENST00000571272 M0R1W7 72 aa13.49□□□□□ -0.25
SCARF1-205ENST00000571272 TRGV3P03979 118 aa13.49□□□□□ -0.25
SCARF1-205ENST00000571272 NXT2Q9NPJ8 142 aaKnown RBP13.49□□□□□ -0.25
SCARF1-205ENST00000571272 CLEC3BP05452 202 aa13.49□□□□□ -0.25
SCARF1-205ENST00000571272 C11orf21Q9P2W6 132 aa13.49□□□□□ -0.25
SCARF1-205ENST00000571272 TRAV26-2A0A0B4J265 109 aa13.48□□□□□ -0.25
SCARF1-205ENST00000571272 IGKV3D-20A0A0C4DH25 116 aa13.48□□□□□ -0.25
SCARF1-205ENST00000571272 K7ERJ3 54 aa13.48□□□□□ -0.25
SCARF1-205ENST00000571272 SCGB2A1O75556 95 aa13.48□□□□□ -0.25
SCARF1-205ENST00000571272 IGKCP01834 107 aa13.48□□□□□ -0.25
SCARF1-205ENST00000571272 CCDC144NLQ6NUI1 221 aa13.48□□□□□ -0.25
SCARF1-205ENST00000571272 ZNF207O43670 478 aaKnown RBP13.47□□□□□ -0.25
SCARF1-205ENST00000571272 SMIM13P0DJ93 91 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 CDSNQ15517 529 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 ZC2HC1BQ5TFG8 222 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 Q6ZQT7 251 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 Q8N6K4 173 aa13.47□□□□□ -0.25
SCARF1-205ENST00000571272 TMEM160Q9NX00 188 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 224.9 ms